RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 GATAD2AQ86YP4 633 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 CLEC4FQ8N1N0 589 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 SUN3Q8TAQ9 357 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 TANKQ92844 425 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 NAT6Q93015 286 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 SLC35G5Q96KT7 338 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 C10orf90Q96M02 699 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 COG8Q96MW5 612 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 ZNF681Q96N22 645 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 CCNL2Q96S94 520 aaPredicted RBP8.14□□□□□ -1.11
TPM3-213ENST00000368545 SYT3Q9BQG1 590 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 BDH2Q9BUT1 245 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 CHID1Q9BWS9 393 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 SLC25A18Q9H1K4 315 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 SEMA5BQ9P283 1151 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 MRPS2Q9Y399 296 aaKnown RBP8.14□□□□□ -1.11
TPM3-213ENST00000368545 ITPR1Q14643 2758 aa8.14□□□□□ -1.11
TPM3-213ENST00000368545 ARID1BQ8NFD5 2236 aaPredicted RBP8.13□□□□□ -1.11
TPM3-213ENST00000368545 LAMA1P25391 3075 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 H0YJX3 145 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 TMX2-CTNND1H3BSU7 103 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 HCRTR1O43613 425 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 KIF1CO43896 1103 aaKnown RBP8.13□□□□□ -1.11
TPM3-213ENST00000368545 NSA2O95478 260 aaKnown RBP8.13□□□□□ -1.11
TPM3-213ENST00000368545 LDLRP01130 860 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 IFNA14P01570 189 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 IFI6P09912 130 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 KHKP50053 298 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 SCARB2Q14108 478 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 GRM7Q14831 915 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 NKAIN2Q5VXU1 208 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 HMBOX1Q6NT76 420 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 CEACAM20Q6UY09 585 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 CBLL1Q75N03 491 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 CCDC80Q76M96 950 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 EIF3MQ7L2H7 374 aaKnown RBP8.13□□□□□ -1.11
TPM3-213ENST00000368545 PRSS41Q7RTY9 318 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 C6orf120Q7Z4R8 191 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 KBTBD2Q8IY47 623 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 CA13Q8N1Q1 262 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 METTL25Q8N6Q8 603 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 PACRGLQ8N7B6 248 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 TTC29Q8NA56 475 aaPredicted RBP8.13□□□□□ -1.11
TPM3-213ENST00000368545 THAP4Q8WY91 577 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 UCN3Q969E3 161 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 MISP3Q96FF7 219 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 PYURFQ96I23 114 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 BTBD9Q96Q07 612 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 CSF3RQ99062 836 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 DPYSL5Q9BPU6 564 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 C9orf16Q9BUW7 83 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 SEMA6AQ9H2E6 1030 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 C3orf14Q9HBI5 128 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 CPNE5Q9HCH3 593 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 A4GALTQ9NPC4 353 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 FSCN3Q9NQT6 498 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 ZCCHC3Q9NUD5 404 aaKnown RBP8.13□□□□□ -1.11
TPM3-213ENST00000368545 C19orf73Q9NVV2 129 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 ADPRHL2Q9NX46 363 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 LPAR3Q9UBY5 353 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 CDC42EP3Q9UKI2 254 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 V9GYQ6 96 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 CABIN1Q9Y6J0 2220 aa8.13□□□□□ -1.11
TPM3-213ENST00000368545 SDK1Q7Z5N4 2213 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 MBD3L4A6NDZ8 208 aaPredicted RBP8.12□□□□□ -1.11
TPM3-213ENST00000368545 MBD3L3A6NE82 208 aaPredicted RBP8.12□□□□□ -1.11
TPM3-213ENST00000368545 ZNF860A6NHJ4 632 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 TPST1O60507 370 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 ACTL6BO94805 426 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 BMP10O95393 424 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 C1QCP02747 245 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 GP1BAP07359 652 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 CD1CP29017 333 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 MAGEA2P43356 314 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 AVPR1BP47901 424 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 MAN2A2P49641 1150 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 CDK6Q00534 326 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 TP53BP2Q13625 1128 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 AMZ1Q400G9 498 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 ENPP6Q6UWR7 440 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 AMIGO2Q86SJ2 522 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 D2HGDHQ8N465 521 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 LSMEM1Q8N8F7 131 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 MIPOL1Q8TD10 442 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 NAF1Q96HR8 494 aaKnown RBP8.12□□□□□ -1.11
TPM3-213ENST00000368545 SLC41A2Q96JW4 573 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 ZNF768Q9H5H4 540 aaKnown RBP8.12□□□□□ -1.11
TPM3-213ENST00000368545 P2RX2Q9UBL9 471 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 MRPS33Q9Y291 106 aaKnown RBP8.12□□□□□ -1.11
TPM3-213ENST00000368545 A0A087WWL8 130 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 HYKKA2RU49 373 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 EME2A4GXA9 379 aaPredicted RBP8.12□□□□□ -1.11
TPM3-213ENST00000368545 PGPEP1LA6NFU8 196 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 H0YIG0 161 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 CYR61O00622 381 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 CLOCKO15516 846 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 EMC8O43402 210 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 B4GAT1O43505 415 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 RDH16O75452 317 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 PDE9AO76083 593 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms