RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 ASNA1O43681 348 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 OR2B3O76000 313 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 GLULP15104 373 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 PRKAR1BP31321 381 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 CSTF2P33240 577 aaKnown RBP eCLIP12.85□□□□□ -0.35
SHC1-202ENST00000368445 SYT14P1Q58G82 188 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 C1orf94Q6P1W5 598 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 OR4F15Q8NGB8 312 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 OR51G2Q8NGK0 314 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 PFN4Q8NHR9 129 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 HLA-CQ95604 372 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 CD180Q99467 661 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 TTTY10Q9BZA0 68 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 MED20Q9H944 212 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 TBC1D17Q9HA65 648 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 AGAP5A6NIR3 686 aa12.84□□□□□ -0.35
SHC1-202ENST00000368445 CYR61O00622 381 aa12.84□□□□□ -0.35
SHC1-202ENST00000368445 GABRB1P18505 474 aa12.84□□□□□ -0.35
SHC1-202ENST00000368445 MTNR1AP48039 350 aa12.84□□□□□ -0.35
SHC1-202ENST00000368445 RAB38P57729 211 aa12.84□□□□□ -0.35
SHC1-202ENST00000368445 OR1D5P58170 312 aa12.84□□□□□ -0.35
SHC1-202ENST00000368445 COPZ1P61923 177 aa12.84□□□□□ -0.35
SHC1-202ENST00000368445 NDUFAF6Q330K2 333 aa12.84□□□□□ -0.35
SHC1-202ENST00000368445 ARHGAP11BQ3KRB8 267 aa12.84□□□□□ -0.35
SHC1-202ENST00000368445 SLC46A3Q7Z3Q1 461 aa12.84□□□□□ -0.35
SHC1-202ENST00000368445 CPOQ8IVL8 374 aa12.84□□□□□ -0.35
SHC1-202ENST00000368445 CYB561A3Q8NBI2 242 aa12.84□□□□□ -0.35
SHC1-202ENST00000368445 MORN4Q8NDC4 146 aa12.84□□□□□ -0.35
SHC1-202ENST00000368445 ZFPM2Q8WW38 1151 aa12.84□□□□□ -0.35
SHC1-202ENST00000368445 TRUB1Q8WWH5 349 aaKnown RBP12.84□□□□□ -0.35
SHC1-202ENST00000368445 IGHV5-51A0A0C4DH38 117 aa12.84□□□□□ -0.35
SHC1-202ENST00000368445 CPED1A4D0V7 1026 aa12.84□□□□□ -0.35
SHC1-202ENST00000368445 SYT5O00445 386 aa12.84□□□□□ -0.35
SHC1-202ENST00000368445 NUDT14O95848 222 aa12.84□□□□□ -0.35
SHC1-202ENST00000368445 TSPAN31Q12999 210 aa12.84□□□□□ -0.35
SHC1-202ENST00000368445 CARTPTQ16568 116 aa12.84□□□□□ -0.35
SHC1-202ENST00000368445 ZNF628Q5EBL2 1059 aa12.84□□□□□ -0.35
SHC1-202ENST00000368445 PLBD1Q6P4A8 553 aa12.84□□□□□ -0.35
SHC1-202ENST00000368445 TSSK4Q6SA08 328 aa12.84□□□□□ -0.35
SHC1-202ENST00000368445 Q7L0L9 218 aa12.84□□□□□ -0.35
SHC1-202ENST00000368445 KIF18BQ86Y91 864 aa12.84□□□□□ -0.35
SHC1-202ENST00000368445 CENPSQ8N2Z9 138 aa12.84□□□□□ -0.35
SHC1-202ENST00000368445 CAMKK1Q8N5S9 505 aa12.84□□□□□ -0.35
SHC1-202ENST00000368445 EFHD2Q96C19 240 aaPredicted RBP12.84□□□□□ -0.35
SHC1-202ENST00000368445 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.84□□□□□ -0.35
SHC1-202ENST00000368445 ETAA1Q9NY74 926 aa12.84□□□□□ -0.35
SHC1-202ENST00000368445 SSR3Q9UNL2 185 aa12.84□□□□□ -0.35
SHC1-202ENST00000368445 TRAV27A0A087WT01 109 aa12.83□□□□□ -0.35
SHC1-202ENST00000368445 CDC14CA4D256 554 aa12.83□□□□□ -0.35
SHC1-202ENST00000368445 TRAPPC13A5PLN9 417 aa12.83□□□□□ -0.35
SHC1-202ENST00000368445 METTL12A8MUP2 240 aa12.83□□□□□ -0.35
SHC1-202ENST00000368445 SMIM10L1P0DMW3 83 aa12.83□□□□□ -0.35
SHC1-202ENST00000368445 RPL4P36578 427 aaKnown RBP12.83□□□□□ -0.35
SHC1-202ENST00000368445 TGFBR2P37173 567 aa12.83□□□□□ -0.35
SHC1-202ENST00000368445 ARFIP1P53367 373 aa12.83□□□□□ -0.35
SHC1-202ENST00000368445 ZNF367Q7RTV3 350 aa12.83□□□□□ -0.35
SHC1-202ENST00000368445 LAPTM4BQ86VI4 370 aa12.83□□□□□ -0.35
SHC1-202ENST00000368445 PSD4Q8NDX1 1056 aa12.83□□□□□ -0.35
SHC1-202ENST00000368445 OR8D4Q8NGM9 314 aa12.83□□□□□ -0.35
SHC1-202ENST00000368445 S100ZQ8WXG8 99 aa12.83□□□□□ -0.35
SHC1-202ENST00000368445 DIO2Q92813 273 aa12.83□□□□□ -0.35
SHC1-202ENST00000368445 OSTF1Q92882 214 aa12.83□□□□□ -0.35
SHC1-202ENST00000368445 SMIM10Q96HG1 83 aa12.83□□□□□ -0.35
SHC1-202ENST00000368445 ZNF582Q96NG8 517 aaPredicted RBP12.83□□□□□ -0.35
SHC1-202ENST00000368445 MND1Q9BWT6 205 aa12.83□□□□□ -0.35
SHC1-202ENST00000368445 WDR12Q9GZL7 423 aaKnown RBP12.83□□□□□ -0.35
SHC1-202ENST00000368445 Q9N2J8 555 aa12.83□□□□□ -0.35
SHC1-202ENST00000368445 MRPL3P09001 348 aaKnown RBP12.83□□□□□ -0.36
SHC1-202ENST00000368445 BMP4P12644 408 aa12.83□□□□□ -0.36
SHC1-202ENST00000368445 DHPSP49366 369 aaPredicted RBP12.83□□□□□ -0.36
SHC1-202ENST00000368445 CRTC2Q53ET0 693 aaPredicted RBP12.83□□□□□ -0.36
SHC1-202ENST00000368445 SPANXN2Q5MJ10 180 aa12.83□□□□□ -0.36
SHC1-202ENST00000368445 SLC36A4Q6YBV0 504 aa12.83□□□□□ -0.36
SHC1-202ENST00000368445 PRR22Q8IZ63 422 aa12.83□□□□□ -0.36
SHC1-202ENST00000368445 OR2T33Q8NG76 320 aa12.83□□□□□ -0.36
SHC1-202ENST00000368445 TMEM239Q8WW34 195 aa12.83□□□□□ -0.36
SHC1-202ENST00000368445 DPYSL5Q9BPU6 564 aa12.83□□□□□ -0.36
SHC1-202ENST00000368445 ASPNQ9BXN1 380 aa12.83□□□□□ -0.36
SHC1-202ENST00000368445 RACGAP1Q9H0H5 632 aa12.83□□□□□ -0.36
SHC1-202ENST00000368445 CNOT2Q9NZN8 540 aaKnown RBP12.83□□□□□ -0.36
SHC1-202ENST00000368445 CLCA3PQ9Y6N3 262 aa12.83□□□□□ -0.36
SHC1-202ENST00000368445 CACNA1EQ15878 2313 aa12.83□□□□□ -0.36
SHC1-202ENST00000368445 SHISA7A6NL88 538 aa12.83□□□□□ -0.36
SHC1-202ENST00000368445 TTC36A6NLP5 189 aa12.83□□□□□ -0.36
SHC1-202ENST00000368445 TMEM150CB9EJG8 249 aa12.83□□□□□ -0.36
SHC1-202ENST00000368445 LRRTM2O43300 516 aa12.83□□□□□ -0.36
SHC1-202ENST00000368445 COQ9O75208 318 aa12.83□□□□□ -0.36
SHC1-202ENST00000368445 CSF2P04141 144 aa12.83□□□□□ -0.36
SHC1-202ENST00000368445 ADRA2AP08913 450 aa12.83□□□□□ -0.36
SHC1-202ENST00000368445 RACK1P63244 317 aaKnown RBP12.83□□□□□ -0.36
SHC1-202ENST00000368445 PRICKLE4Q2TBC4 344 aa12.83□□□□□ -0.36
SHC1-202ENST00000368445 KLHL22Q53GT1 634 aa12.83□□□□□ -0.36
SHC1-202ENST00000368445 OR8H2Q8N162 312 aa12.83□□□□□ -0.36
SHC1-202ENST00000368445 OR51Q1Q8NH59 317 aa12.83□□□□□ -0.36
SHC1-202ENST00000368445 DYNC2LI1Q8TCX1 351 aa12.83□□□□□ -0.36
SHC1-202ENST00000368445 HTRA1Q92743 480 aa12.83□□□□□ -0.36
SHC1-202ENST00000368445 MED31Q9Y3C7 131 aa12.83□□□□□ -0.36
SHC1-202ENST00000368445 CHST2Q9Y4C5 530 aa12.83□□□□□ -0.36
SHC1-202ENST00000368445 SLC35F4A4IF30 521 aa12.82□□□□□ -0.36
SHC1-202ENST00000368445 FAM221BA6H8Z2 402 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms