RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 WFDC6Q9BQY6 131 aa8.79□□□□□ -1
SMG6-202ENST00000354901 KATNB1Q9BVA0 655 aa8.79□□□□□ -1
SMG6-202ENST00000354901 MND1Q9BWT6 205 aa8.79□□□□□ -1
SMG6-202ENST00000354901 TM7SF3Q9NS93 570 aa8.79□□□□□ -1
SMG6-202ENST00000354901 TAAR2Q9P1P5 351 aa8.79□□□□□ -1
SMG6-202ENST00000354901 TRPC4Q9UBN4 977 aa8.79□□□□□ -1
SMG6-202ENST00000354901 OR10H1Q9Y4A9 318 aa8.79□□□□□ -1
SMG6-202ENST00000354901 SERTM1A2A2V5 107 aa8.79□□□□□ -1
SMG6-202ENST00000354901 ANXA2P2A6NMY6 339 aa8.79□□□□□ -1
SMG6-202ENST00000354901 KRBOX1C9JBD0 128 aa8.79□□□□□ -1
SMG6-202ENST00000354901 QSOX1O00391 747 aa8.79□□□□□ -1
SMG6-202ENST00000354901 LATO43561 262 aa8.79□□□□□ -1
SMG6-202ENST00000354901 NME6O75414 186 aaPredicted RBP8.79□□□□□ -1
SMG6-202ENST00000354901 DGKGP49619 791 aa8.79□□□□□ -1
SMG6-202ENST00000354901 PUM1Q14671 1186 aaKnown RBP eCLIP8.79□□□□□ -1
SMG6-202ENST00000354901 TCTE1Q5JU00 501 aa8.79□□□□□ -1
SMG6-202ENST00000354901 PRAMEF14Q5SWL7 426 aa8.79□□□□□ -1
SMG6-202ENST00000354901 PRAMEF13Q5VWM6 474 aa8.79□□□□□ -1
SMG6-202ENST00000354901 FAM71E1Q6IPT2 247 aa8.79□□□□□ -1
SMG6-202ENST00000354901 RASGRP3Q8IV61 690 aa8.79□□□□□ -1
SMG6-202ENST00000354901 C9orf43Q8TAL5 461 aaPredicted RBP8.79□□□□□ -1
SMG6-202ENST00000354901 GANCQ8TET4 914 aa8.79□□□□□ -1
SMG6-202ENST00000354901 XAGE5Q8WWM1 108 aa8.79□□□□□ -1
SMG6-202ENST00000354901 TM9SF4Q92544 642 aa8.79□□□□□ -1
SMG6-202ENST00000354901 TRIM43Q96BQ3 446 aaPredicted RBP8.79□□□□□ -1
SMG6-202ENST00000354901 TMEM19Q96HH6 336 aa8.79□□□□□ -1
SMG6-202ENST00000354901 ARL6Q9H0F7 186 aa8.79□□□□□ -1
SMG6-202ENST00000354901 TAS2R7Q9NYW3 318 aa8.79□□□□□ -1
SMG6-202ENST00000354901 ENPP4Q9Y6X5 453 aa8.79□□□□□ -1
SMG6-202ENST00000354901 IQCMA0A1B0GVH7 501 aa8.78□□□□□ -1
SMG6-202ENST00000354901 OR2W5A6NFC9 320 aa8.78□□□□□ -1
SMG6-202ENST00000354901 H7BY64 318 aa8.78□□□□□ -1
SMG6-202ENST00000354901 DNASE2O00115 360 aaPredicted RBP8.78□□□□□ -1
SMG6-202ENST00000354901 LILRB3O75022 631 aa8.78□□□□□ -1
SMG6-202ENST00000354901 MT-ND4P03905 459 aa8.78□□□□□ -1
SMG6-202ENST00000354901 SCG5P05408 212 aa8.78□□□□□ -1
SMG6-202ENST00000354901 GABRB1P18505 474 aa8.78□□□□□ -1
SMG6-202ENST00000354901 XCR1P46094 333 aa8.78□□□□□ -1
SMG6-202ENST00000354901 SELENOPP49908 381 aa8.78□□□□□ -1
SMG6-202ENST00000354901 CRISP1P54107 249 aa8.78□□□□□ -1
SMG6-202ENST00000354901 PNLIPRP1P54315 467 aa8.78□□□□□ -1
SMG6-202ENST00000354901 LSM11P83369 360 aaKnown RBP eCLIP8.78□□□□□ -1
SMG6-202ENST00000354901 FNDC3BQ53EP0 1204 aaKnown RBP8.78□□□□□ -1
SMG6-202ENST00000354901 SFRP4Q6FHJ7 346 aaPredicted RBP8.78□□□□□ -1
SMG6-202ENST00000354901 LILRA6Q6PI73 481 aa8.78□□□□□ -1
SMG6-202ENST00000354901 DPPA4Q7L190 304 aa8.78□□□□□ -1
SMG6-202ENST00000354901 SPRED2Q7Z698 418 aa8.78□□□□□ -1
SMG6-202ENST00000354901 ADGRF3Q8IZF5 1079 aa8.78□□□□□ -1
SMG6-202ENST00000354901 OR2T4Q8NH00 348 aa8.78□□□□□ -1
SMG6-202ENST00000354901 SLC38A5Q8WUX1 472 aa8.78□□□□□ -1
SMG6-202ENST00000354901 RNFT2Q96EX2 444 aa8.78□□□□□ -1
SMG6-202ENST00000354901 PRAP1Q96NZ9 151 aa8.78□□□□□ -1
SMG6-202ENST00000354901 SLC38A3Q99624 504 aa8.78□□□□□ -1
SMG6-202ENST00000354901 PELOQ9BRX2 385 aaKnown RBP8.78□□□□□ -1
SMG6-202ENST00000354901 EVA1AQ9H8M9 152 aa8.78□□□□□ -1
SMG6-202ENST00000354901 IL23AQ9NPF7 189 aa8.78□□□□□ -1
SMG6-202ENST00000354901 LYARQ9NX58 379 aaKnown RBP8.78□□□□□ -1
SMG6-202ENST00000354901 TVP23BQ9NYZ1 205 aa8.78□□□□□ -1
SMG6-202ENST00000354901 ATXN7L1Q9ULK2 861 aaPredicted RBP8.78□□□□□ -1
SMG6-202ENST00000354901 FLVCR2Q9UPI3 526 aa8.78□□□□□ -1
SMG6-202ENST00000354901 LHX6Q9UPM6 363 aa8.78□□□□□ -1
SMG6-202ENST00000354901 HYKKA2RU49 373 aa8.78□□□□□ -1
SMG6-202ENST00000354901 MFSD2BA6NFX1 497 aa8.78□□□□□ -1
SMG6-202ENST00000354901 FFAR1O14842 300 aa8.78□□□□□ -1
SMG6-202ENST00000354901 PRKRAO75569 313 aaKnown RBP8.78□□□□□ -1
SMG6-202ENST00000354901 KLHL18O94889 574 aa8.78□□□□□ -1
SMG6-202ENST00000354901 ARAFP10398 606 aa8.78□□□□□ -1
SMG6-202ENST00000354901 C6P13671 934 aa8.78□□□□□ -1
SMG6-202ENST00000354901 PTNP21246 168 aa8.78□□□□□ -1
SMG6-202ENST00000354901 VIPR2P41587 438 aa8.78□□□□□ -1
SMG6-202ENST00000354901 PIN1Q13526 163 aaPredicted RBP8.78□□□□□ -1
SMG6-202ENST00000354901 SEC23BQ15437 767 aa8.78□□□□□ -1
SMG6-202ENST00000354901 ARHGAP15Q53QZ3 475 aa8.78□□□□□ -1
SMG6-202ENST00000354901 ZNF547Q8IVP9 402 aa8.78□□□□□ -1
SMG6-202ENST00000354901 SLC30A8Q8IWU4 369 aa8.78□□□□□ -1
SMG6-202ENST00000354901 OR5D16Q8NGK9 328 aa8.78□□□□□ -1
SMG6-202ENST00000354901 NUS1Q96E22 293 aa8.78□□□□□ -1
SMG6-202ENST00000354901 DTD2Q96FN9 168 aa8.78□□□□□ -1
SMG6-202ENST00000354901 DPYSL5Q9BPU6 564 aa8.78□□□□□ -1
SMG6-202ENST00000354901 GSDMCQ9BYG8 508 aa8.78□□□□□ -1
SMG6-202ENST00000354901 OSGEPL1Q9H4B0 414 aa8.78□□□□□ -1
SMG6-202ENST00000354901 KCNK12Q9HB15 430 aa8.78□□□□□ -1
SMG6-202ENST00000354901 KLHL1Q9NR64 748 aa8.78□□□□□ -1
SMG6-202ENST00000354901 SLCO1C1Q9NYB5 712 aa8.78□□□□□ -1
SMG6-202ENST00000354901 ARID1AO14497 2285 aa8.78□□□□□ -1
SMG6-202ENST00000354901 F5P12259 2224 aa8.78□□□□□ -1
SMG6-202ENST00000354901 METTL21EPA6NDL7 271 aa8.78□□□□□ -1
SMG6-202ENST00000354901 MOSPD3O75425 235 aa8.78□□□□□ -1
SMG6-202ENST00000354901 IRS1P35568 1242 aa8.78□□□□□ -1
SMG6-202ENST00000354901 ZNF124Q15973 351 aa8.78□□□□□ -1
SMG6-202ENST00000354901 ZNF630Q2M218 657 aaPredicted RBP8.78□□□□□ -1
SMG6-202ENST00000354901 REEP3Q6NUK4 255 aa8.78□□□□□ -1
SMG6-202ENST00000354901 FAM198BQ6UWH4 519 aa8.78□□□□□ -1
SMG6-202ENST00000354901 CAMKMTQ7Z624 323 aa8.78□□□□□ -1
SMG6-202ENST00000354901 PLA2G15Q8NCC3 412 aa8.78□□□□□ -1
SMG6-202ENST00000354901 DENND6BQ8NEG7 585 aa8.78□□□□□ -1
SMG6-202ENST00000354901 RFT1Q96AA3 541 aa8.78□□□□□ -1
SMG6-202ENST00000354901 WDFY2Q96P53 400 aa8.78□□□□□ -1
SMG6-202ENST00000354901 LRRC3BQ96PB8 259 aa8.78□□□□□ -1
SMG6-202ENST00000354901 TSSK6Q9BXA6 273 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms