RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 ZNF578Q96N58 590 aaPredicted RBP15.49■□□□□ 0.07
SAMM50-201ENST00000350028 DGAT2Q96PD7 388 aa15.49■□□□□ 0.07
SAMM50-201ENST00000350028 TGM7Q96PF1 710 aa15.49■□□□□ 0.07
SAMM50-201ENST00000350028 TAPBPLQ9BX59 468 aa15.49■□□□□ 0.07
SAMM50-201ENST00000350028 RBCK1Q9BYM8 510 aa15.49■□□□□ 0.07
SAMM50-201ENST00000350028 OR51E2Q9H255 320 aa15.49■□□□□ 0.07
SAMM50-201ENST00000350028 MMP27Q9H306 513 aa15.49■□□□□ 0.07
SAMM50-201ENST00000350028 FGF20Q9NP95 211 aaPredicted RBP15.49■□□□□ 0.07
SAMM50-201ENST00000350028 MED17Q9NVC6 651 aa15.49■□□□□ 0.07
SAMM50-201ENST00000350028 CDH10Q9Y6N8 788 aa15.49■□□□□ 0.07
SAMM50-201ENST00000350028 NPIPA5A0A0B4J1W7 369 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 TTC36A6NLP5 189 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 KDM4EB2RXH2 506 aaPredicted RBP15.48■□□□□ 0.07
SAMM50-201ENST00000350028 NPIPA7E9PJI5 369 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 ARHGAP33O14559 1287 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 HRO43593 1189 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 CSO75390 466 aaKnown RBP15.48■□□□□ 0.07
SAMM50-201ENST00000350028 NTN1O95631 604 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 NPIPA8P0DM63 369 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 PRG2P13727 222 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 GNSP15586 552 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 DRD5P21918 477 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 HTR2AP28223 471 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 TGFBR1P36897 503 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 GPR4P46093 362 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 FNTBP49356 437 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 EMDP50402 254 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 PSG6Q00889 435 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 BIKQ13323 160 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 ZSWIM7Q19AV6 140 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 FLYWCH1Q4VC44 716 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 ZNF620Q6ZNG0 422 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 Q6ZNX1 250 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 AMER2Q8N7J2 671 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 MCFD2Q8NI22 146 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 C1orf216Q8TAB5 229 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 OPALINQ96PE5 141 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 ZNF559Q9BR84 538 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 PELOQ9BRX2 385 aaKnown RBP15.48■□□□□ 0.07
SAMM50-201ENST00000350028 ZBTB20Q9HC78 741 aaPredicted RBP15.48■□□□□ 0.07
SAMM50-201ENST00000350028 IRAK4Q9NWZ3 460 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 SOHLH2Q9NX45 425 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 THADAQ6YHU6 1953 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 LOC100506127A0A0U1RQW1 187 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 FITM1A5D6W6 292 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 METTL15A6NJ78 407 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 RHPN2P1A8MT19 583 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 H0YIG0 161 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 TGFBR3LH3BV60 316 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 PIP5K1CO60331 668 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 LYPD3O95274 346 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 HMGN1P05114 100 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 GKN3PP0CG01 181 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 CKMT1AP12532 417 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 GFERP55789 205 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 HSD17B7P56937 341 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 MAT1AQ00266 395 aaKnown RBP15.48■□□□□ 0.07
SAMM50-201ENST00000350028 RAB40BQ12829 278 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 C1DQ13901 141 aaKnown RBP15.48■□□□□ 0.07
SAMM50-201ENST00000350028 ZNF404Q494X3 552 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 MINDY4Q4G0A6 757 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 C3orf38Q5JPI3 329 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 ZNF613Q6PF04 617 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 GDPGP1Q6ZNW5 385 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 IGFN1Q86VF2 1251 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 ATCAYQ86WG3 371 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 GRAMD2AQ8IUY3 354 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 ANKK1Q8NFD2 765 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 MMABQ96EY8 250 aaPredicted RBP15.48■□□□□ 0.07
SAMM50-201ENST00000350028 CHCHD6Q9BRQ6 235 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 TMEM27Q9HBJ8 222 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 CCDC59Q9P031 241 aaKnown RBP15.48■□□□□ 0.07
SAMM50-201ENST00000350028 CLEC2DQ9UHP7 191 aa15.48■□□□□ 0.07
SAMM50-201ENST00000350028 ZNF223Q9UK11 482 aaPredicted RBP15.48■□□□□ 0.07
SAMM50-201ENST00000350028 IGHV5-51A0A0C4DH38 117 aa15.47■□□□□ 0.07
SAMM50-201ENST00000350028 UNC119BA6NIH7 251 aa15.47■□□□□ 0.07
SAMM50-201ENST00000350028 MYL12BO14950 172 aa15.47■□□□□ 0.07
SAMM50-201ENST00000350028 ZNF749O43361 778 aa15.47■□□□□ 0.07
SAMM50-201ENST00000350028 PRAMEF2O60811 474 aa15.47■□□□□ 0.07
SAMM50-201ENST00000350028 PIAS2O75928 621 aa15.47■□□□□ 0.07
SAMM50-201ENST00000350028 GALNSP34059 522 aa15.47■□□□□ 0.07
SAMM50-201ENST00000350028 IDUAP35475 653 aa15.47■□□□□ 0.07
SAMM50-201ENST00000350028 ZP2Q05996 745 aa15.47■□□□□ 0.07
SAMM50-201ENST00000350028 GRM7Q14831 915 aa15.47■□□□□ 0.07
SAMM50-201ENST00000350028 SSX1Q16384 188 aa15.47■□□□□ 0.07
SAMM50-201ENST00000350028 PGGHGQ32M88 737 aa15.47■□□□□ 0.07
SAMM50-201ENST00000350028 OR4Q3Q8NH05 313 aa15.47■□□□□ 0.07
SAMM50-201ENST00000350028 TMEM239Q8WW34 195 aa15.47■□□□□ 0.07
SAMM50-201ENST00000350028 RFKQ969G6 155 aa15.47■□□□□ 0.07
SAMM50-201ENST00000350028 HS6ST2Q96MM7 605 aa15.47■□□□□ 0.07
SAMM50-201ENST00000350028 VSTM2LQ96N03 204 aa15.47■□□□□ 0.07
SAMM50-201ENST00000350028 HHATLQ9HCP6 504 aa15.47■□□□□ 0.07
SAMM50-201ENST00000350028 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.47■□□□□ 0.07
SAMM50-201ENST00000350028 CHCHD3Q9NX63 227 aaKnown RBP15.47■□□□□ 0.07
SAMM50-201ENST00000350028 TMEM5Q9Y2B1 443 aa15.47■□□□□ 0.07
SAMM50-201ENST00000350028 SURF4O15260 269 aa15.46■□□□□ 0.07
SAMM50-201ENST00000350028 ENDOUP21128 410 aaKnown RBP15.46■□□□□ 0.07
SAMM50-201ENST00000350028 SSTR4P31391 388 aa15.46■□□□□ 0.07
SAMM50-201ENST00000350028 GAS1P54826 345 aa15.46■□□□□ 0.07
SAMM50-201ENST00000350028 PSMD4P55036 377 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms