RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 EXD2Q9NVH0 621 aa15.15■□□□□ 0.02
SHOX-201ENST00000334060 NTNG1Q9Y2I2 539 aa15.15■□□□□ 0.02
SHOX-201ENST00000334060 EPG5Q9HCE0 2579 aa15.14■□□□□ 0.01
SHOX-201ENST00000334060 DUXAA6NLW8 204 aa15.14■□□□□ 0.01
SHOX-201ENST00000334060 STX11O75558 287 aa15.14■□□□□ 0.01
SHOX-201ENST00000334060 NEURL1O76050 574 aa15.14■□□□□ 0.01
SHOX-201ENST00000334060 OXSR1O95747 527 aaPredicted RBP15.14■□□□□ 0.01
SHOX-201ENST00000334060 FAM87AP0C7U9 286 aa15.14■□□□□ 0.01
SHOX-201ENST00000334060 IL12BP29460 328 aa15.14■□□□□ 0.01
SHOX-201ENST00000334060 KDELR2P33947 212 aa15.14■□□□□ 0.01
SHOX-201ENST00000334060 CRISP3P54108 245 aa15.14■□□□□ 0.01
SHOX-201ENST00000334060 TMPRSS3P57727 454 aa15.14■□□□□ 0.01
SHOX-201ENST00000334060 DCAF7P61962 342 aa15.14■□□□□ 0.01
SHOX-201ENST00000334060 CCNIQ14094 377 aa15.14■□□□□ 0.01
SHOX-201ENST00000334060 TRIM25Q14258 630 aaKnown RBP15.14■□□□□ 0.01
SHOX-201ENST00000334060 LINC00303Q3SY05 128 aa15.14■□□□□ 0.01
SHOX-201ENST00000334060 CBLN3Q6UW01 205 aa15.14■□□□□ 0.01
SHOX-201ENST00000334060 ZNF836Q6ZNA1 936 aa15.14■□□□□ 0.01
SHOX-201ENST00000334060 PTRH1Q86Y79 214 aaKnown RBP15.14■□□□□ 0.01
SHOX-201ENST00000334060 TMEM156Q8N614 296 aa15.14■□□□□ 0.01
SHOX-201ENST00000334060 KDF1Q8NAX2 398 aaPredicted RBP15.14■□□□□ 0.01
SHOX-201ENST00000334060 ASB15Q8WXK1 588 aa15.14■□□□□ 0.01
SHOX-201ENST00000334060 RAD21L1Q9H4I0 556 aa15.14■□□□□ 0.01
SHOX-201ENST00000334060 YARS2Q9Y2Z4 477 aaKnown RBP15.14■□□□□ 0.01
SHOX-201ENST00000334060 NINQ8N4C6 2090 aa15.14■□□□□ 0.01
SHOX-201ENST00000334060 TCRBV5S2A0A599 114 aa15.13■□□□□ 0.01
SHOX-201ENST00000334060 C5orf58C9J3I9 102 aa15.13■□□□□ 0.01
SHOX-201ENST00000334060 GSTA4O15217 222 aa15.13■□□□□ 0.01
SHOX-201ENST00000334060 ACOX3O15254 700 aa15.13■□□□□ 0.01
SHOX-201ENST00000334060 WISP2O76076 250 aa15.13■□□□□ 0.01
SHOX-201ENST00000334060 MFN2O95140 757 aa15.13■□□□□ 0.01
SHOX-201ENST00000334060 NTN1O95631 604 aa15.13■□□□□ 0.01
SHOX-201ENST00000334060 CD247P20963 164 aa15.13■□□□□ 0.01
SHOX-201ENST00000334060 RFC3P40938 356 aa15.13■□□□□ 0.01
SHOX-201ENST00000334060 OR1E2P47887 323 aa15.13■□□□□ 0.01
SHOX-201ENST00000334060 RRADP55042 308 aa15.13■□□□□ 0.01
SHOX-201ENST00000334060 OC90Q02509 493 aaPredicted RBP15.13■□□□□ 0.01
SHOX-201ENST00000334060 MEP1AQ16819 746 aa15.13■□□□□ 0.01
SHOX-201ENST00000334060 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.13■□□□□ 0.01
SHOX-201ENST00000334060 LRRC74BQ6ZQY2 392 aa15.13■□□□□ 0.01
SHOX-201ENST00000334060 ALDH16A1Q8IZ83 802 aa15.13■□□□□ 0.01
SHOX-201ENST00000334060 BHLHE22Q8NFJ8 381 aaPredicted RBP15.13■□□□□ 0.01
SHOX-201ENST00000334060 NPAS1Q99742 590 aa15.13■□□□□ 0.01
SHOX-201ENST00000334060 SAP130Q9H0E3 1048 aa15.13■□□□□ 0.01
SHOX-201ENST00000334060 DENND2DQ9H6A0 471 aaPredicted RBP15.13■□□□□ 0.01
SHOX-201ENST00000334060 KLHL1Q9NR64 748 aa15.13■□□□□ 0.01
SHOX-201ENST00000334060 LUZP4Q9P127 313 aa15.13■□□□□ 0.01
SHOX-201ENST00000334060 SUCOQ9UBS9 1254 aaKnown RBP15.13■□□□□ 0.01
SHOX-201ENST00000334060 GPC6Q9Y625 555 aaPredicted RBP15.13■□□□□ 0.01
SHOX-201ENST00000334060 AGAP5A6NIR3 686 aa15.13■□□□□ 0.01
SHOX-201ENST00000334060 SEMA7AO75326 666 aa15.13■□□□□ 0.01
SHOX-201ENST00000334060 CEACAM4O75871 244 aa15.13■□□□□ 0.01
SHOX-201ENST00000334060 PRG2P13727 222 aa15.13■□□□□ 0.01
SHOX-201ENST00000334060 SOX8P57073 446 aa15.13■□□□□ 0.01
SHOX-201ENST00000334060 NTRK2Q16620 822 aa15.13■□□□□ 0.01
SHOX-201ENST00000334060 ABHD17BQ5VST6 288 aa15.13■□□□□ 0.01
SHOX-201ENST00000334060 BROXQ5VW32 411 aa15.13■□□□□ 0.01
SHOX-201ENST00000334060 TSEN54Q7Z6J9 526 aaKnown RBP15.13■□□□□ 0.01
SHOX-201ENST00000334060 ZNF619Q8N2I2 560 aa15.13■□□□□ 0.01
SHOX-201ENST00000334060 POGLUT1Q8NBL1 392 aa15.13■□□□□ 0.01
SHOX-201ENST00000334060 C7orf57Q8NEG2 295 aa15.13■□□□□ 0.01
SHOX-201ENST00000334060 APOBEC4Q8WW27 367 aaKnown RBP15.13■□□□□ 0.01
SHOX-201ENST00000334060 ASB9Q96DX5 294 aa15.13■□□□□ 0.01
SHOX-201ENST00000334060 ZNF184Q99676 751 aaPredicted RBP15.13■□□□□ 0.01
SHOX-201ENST00000334060 SH2D2AQ9NP31 389 aa15.13■□□□□ 0.01
SHOX-201ENST00000334060 ANGPT4Q9Y264 503 aa15.13■□□□□ 0.01
SHOX-201ENST00000334060 M0R3H8 397 aa15.12■□□□□ 0.01
SHOX-201ENST00000334060 FADS1O60427 444 aa15.12■□□□□ 0.01
SHOX-201ENST00000334060 ZNF682O95780 498 aa15.12■□□□□ 0.01
SHOX-201ENST00000334060 GKN3PP0CG01 181 aa15.12■□□□□ 0.01
SHOX-201ENST00000334060 RPS4Y1P22090 263 aaKnown RBP15.12■□□□□ 0.01
SHOX-201ENST00000334060 GSTT1P30711 240 aa15.12■□□□□ 0.01
SHOX-201ENST00000334060 DNASE1L1P49184 302 aa15.12■□□□□ 0.01
SHOX-201ENST00000334060 AGAP7PQ5VUJ5 663 aa15.12■□□□□ 0.01
SHOX-201ENST00000334060 TAGAPQ8N103 731 aa15.12■□□□□ 0.01
SHOX-201ENST00000334060 CYP4Z2PQ8N1L4 340 aa15.12■□□□□ 0.01
SHOX-201ENST00000334060 OR52P1PQ8NH57 321 aa15.12■□□□□ 0.01
SHOX-201ENST00000334060 SLC22A8Q8TCC7 542 aa15.12■□□□□ 0.01
SHOX-201ENST00000334060 CNOT9Q92600 299 aaKnown RBP15.12■□□□□ 0.01
SHOX-201ENST00000334060 RELTQ969Z4 430 aa15.12■□□□□ 0.01
SHOX-201ENST00000334060 FAM162AQ96A26 154 aa15.12■□□□□ 0.01
SHOX-201ENST00000334060 SH3YL1Q96HL8 342 aaPredicted RBP15.12■□□□□ 0.01
SHOX-201ENST00000334060 TPD52L3Q96J77 140 aa15.12■□□□□ 0.01
SHOX-201ENST00000334060 AGAP4Q96P64 663 aa15.12■□□□□ 0.01
SHOX-201ENST00000334060 BCL2L10Q9HD36 194 aa15.12■□□□□ 0.01
SHOX-201ENST00000334060 LIPT1Q9Y234 373 aa15.12■□□□□ 0.01
SHOX-201ENST00000334060 MED12Q93074 2177 aa15.12■□□□□ 0.01
SHOX-201ENST00000334060 SMIM31A0A1B0GVY4 71 aa15.11■□□□□ 0.01
SHOX-201ENST00000334060 OR6C70A6NIJ9 312 aa15.11■□□□□ 0.01
SHOX-201ENST00000334060 TPST2O60704 377 aa15.11■□□□□ 0.01
SHOX-201ENST00000334060 PRKD3O94806 890 aa15.11■□□□□ 0.01
SHOX-201ENST00000334060 EVI2BP34910 448 aa15.11■□□□□ 0.01
SHOX-201ENST00000334060 NRG3P56975 720 aa15.11■□□□□ 0.01
SHOX-201ENST00000334060 HPCAP84074 193 aa15.11■□□□□ 0.01
SHOX-201ENST00000334060 FOXK1P85037 733 aa15.11■□□□□ 0.01
SHOX-201ENST00000334060 RBBP4Q09028 425 aa15.11■□□□□ 0.01
SHOX-201ENST00000334060 FOXD4Q12950 439 aaPredicted RBP15.11■□□□□ 0.01
SHOX-201ENST00000334060 CYBRD1Q53TN4 286 aa15.11■□□□□ 0.01
SHOX-201ENST00000334060 CRB2Q5IJ48 1285 aa15.11■□□□□ 0.01
SHOX-201ENST00000334060 FNDC7Q5VTL7 733 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms