RNA–Protein interactions for RNA: ENST00000332118.10

SRPRA-201, Transcript of SRP receptor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPRA, Length 3,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-201ENST00000332118 SPEGQ15772 3267 aa12.66□□□□□ -0.38
SRPRA-201ENST00000332118 A0A0B4J2E0 115 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 A0A1B0GX12 115 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 K7ESF4 209 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 DSCR3O14972 297 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 IDUAP35475 653 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 FGFBP1Q14512 234 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 ZNF730Q6ZMV8 503 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 GALNT12Q8IXK2 581 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 TMEFF1Q8IYR6 380 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 COX18Q8N8Q8 333 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 FAM71CQ8NEG0 241 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 KBTBD8Q8NFY9 601 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 OR7G1Q8NGA0 311 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 OR52R1Q8NGF1 315 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 OR4Q3Q8NH05 313 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 CCNL2Q96S94 520 aaPredicted RBP12.65□□□□□ -0.38
SRPRA-201ENST00000332118 HMG20AQ9NP66 347 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 MRPS33Q9Y291 106 aaKnown RBP12.65□□□□□ -0.38
SRPRA-201ENST00000332118 F5P12259 2224 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 SNTNA6NMZ2 147 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 EIF2S1P05198 315 aaKnown RBP12.65□□□□□ -0.38
SRPRA-201ENST00000332118 CPEP16870 476 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 C21orf59P57076 290 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 FXYD6P3P58550 94 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 ARMC4Q5T2S8 1044 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 CHRDL2Q6WN34 429 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 WDR88Q6ZMY6 472 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 TMEM255BQ8WV15 326 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 RLN3Q8WXF3 142 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 HLA-CQ95604 372 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 COL26A1Q96A83 441 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 HS6ST2Q96MM7 605 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 TPSD1Q9BZJ3 242 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 DCSTAMPQ9H295 470 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 EGLN3Q9H6Z9 239 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 CACYBPQ9HB71 228 aaKnown RBP12.65□□□□□ -0.38
SRPRA-201ENST00000332118 AMBNQ9NP70 447 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 DNAJB12Q9NXW2 375 aaKnown RBP12.65□□□□□ -0.38
SRPRA-201ENST00000332118 SLC7A7Q9UM01 511 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 TMEM5Q9Y2B1 443 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 IGKV3D-11A0A0A0MRZ8 115 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 CCDC85CA6NKD9 419 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 M0R3G1 203 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 ARHGAP33O14559 1287 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 NUDT21O43809 227 aaKnown RBP12.65□□□□□ -0.38
SRPRA-201ENST00000332118 PRAMEF2O60811 474 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 PIAS2O75928 621 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 TYRP1P17643 537 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 AVPR1BP47901 424 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 PSMD4P55036 377 aaKnown RBP12.65□□□□□ -0.38
SRPRA-201ENST00000332118 SQSTM1Q13501 440 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 OR1Q1Q15612 314 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 PGGHGQ32M88 737 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 PRSS42Q7Z5A4 293 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 LRFN5Q96NI6 719 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 OR1F2PQ96R84 312 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 IL4I1Q96RQ9 567 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 DSN1Q9H410 356 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 LANCL2Q9NS86 450 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.65□□□□□ -0.38
SRPRA-201ENST00000332118 MMACHCQ9Y4U1 282 aa12.65□□□□□ -0.38
SRPRA-201ENST00000332118 SCN3AQ9NY46 2000 aa12.64□□□□□ -0.39
SRPRA-201ENST00000332118 HTR3EA5X5Y0 456 aa12.64□□□□□ -0.39
SRPRA-201ENST00000332118 SYNDIG1LA6NDD5 238 aa12.64□□□□□ -0.39
SRPRA-201ENST00000332118 BOLA2-SMG1P6H3BVE0 249 aa12.64□□□□□ -0.39
SRPRA-201ENST00000332118 J3QRK9 145 aa12.64□□□□□ -0.39
SRPRA-201ENST00000332118 TAF4O00268 1085 aa12.64□□□□□ -0.39
SRPRA-201ENST00000332118 BHLHE40O14503 412 aa12.64□□□□□ -0.39
SRPRA-201ENST00000332118 FRS3O43559 492 aa12.64□□□□□ -0.39
SRPRA-201ENST00000332118 CHP2O43745 196 aa12.64□□□□□ -0.39
SRPRA-201ENST00000332118 HBQ1P09105 142 aa12.64□□□□□ -0.39
SRPRA-201ENST00000332118 CD40LGP29965 261 aa12.64□□□□□ -0.39
SRPRA-201ENST00000332118 ACAA2P42765 397 aaKnown RBP12.64□□□□□ -0.39
SRPRA-201ENST00000332118 SERTAD2Q14140 314 aa12.64□□□□□ -0.39
SRPRA-201ENST00000332118 NXNL2Q5VZ03 156 aa12.64□□□□□ -0.39
SRPRA-201ENST00000332118 ZNF761Q86XN6 746 aaPredicted RBP12.64□□□□□ -0.39
SRPRA-201ENST00000332118 KMT5CQ86Y97 462 aa12.64□□□□□ -0.39
SRPRA-201ENST00000332118 SNX29P2Q8IUI4 249 aa12.64□□□□□ -0.39
SRPRA-201ENST00000332118 IQCF1Q8N6M8 205 aa12.64□□□□□ -0.39
SRPRA-201ENST00000332118 LMX1AQ8TE12 382 aa12.64□□□□□ -0.39
SRPRA-201ENST00000332118 PIK3R3Q92569 461 aa12.64□□□□□ -0.39
SRPRA-201ENST00000332118 ZHX1-C8orf76Q96EF9 292 aa12.64□□□□□ -0.39
SRPRA-201ENST00000332118 FAM46AQ96IP4 442 aaKnown RBP12.64□□□□□ -0.39
SRPRA-201ENST00000332118 LRR1Q96L50 414 aa12.64□□□□□ -0.39
SRPRA-201ENST00000332118 SLC38A2Q96QD8 506 aa12.64□□□□□ -0.39
SRPRA-201ENST00000332118 ZBTB20Q9HC78 741 aaPredicted RBP12.64□□□□□ -0.39
SRPRA-201ENST00000332118 STARD5Q9NSY2 213 aa12.64□□□□□ -0.39
SRPRA-201ENST00000332118 FBXO34Q9NWN3 711 aa12.64□□□□□ -0.39
SRPRA-201ENST00000332118 TVP23BQ9NYZ1 205 aa12.64□□□□□ -0.39
SRPRA-201ENST00000332118 DNAJC27Q9NZQ0 273 aa12.64□□□□□ -0.39
SRPRA-201ENST00000332118 SEC14L4Q9UDX3 406 aa12.64□□□□□ -0.39
SRPRA-201ENST00000332118 EXOSC1Q9Y3B2 195 aaKnown RBP12.64□□□□□ -0.39
SRPRA-201ENST00000332118 PEX12O00623 359 aa12.64□□□□□ -0.39
SRPRA-201ENST00000332118 ZBTB11O95625 1053 aaPredicted RBP12.64□□□□□ -0.39
SRPRA-201ENST00000332118 IGKV1D-16P01601 117 aa12.64□□□□□ -0.39
SRPRA-201ENST00000332118 ZGLP1P0C6A0 271 aa12.64□□□□□ -0.39
SRPRA-201ENST00000332118 GIMD1P0DJR0 217 aa12.64□□□□□ -0.39
SRPRA-201ENST00000332118 TNNI3P19429 210 aa12.64□□□□□ -0.39
SRPRA-201ENST00000332118 POU1F1P28069 291 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms