RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 CDH26Q8IXH8 852 aa22.77■■□□□ 1.24
SOX1-201ENST00000330949 SMIM4Q8WVI0 70 aa22.77■■□□□ 1.24
SOX1-201ENST00000330949 TEX12Q9BXU0 123 aa22.77■■□□□ 1.24
SOX1-201ENST00000330949 MAN2C1Q9NTJ4 1040 aa22.77■■□□□ 1.24
SOX1-201ENST00000330949 BABAM2Q9NXR7 383 aa22.77■■□□□ 1.24
SOX1-201ENST00000330949 CLEC4AQ9UMR7 237 aa22.77■■□□□ 1.24
SOX1-201ENST00000330949 A0A0G2JK05 382 aa22.77■■□□□ 1.23
SOX1-201ENST00000330949 OR2M5A3KFT3 312 aa22.77■■□□□ 1.23
SOX1-201ENST00000330949 CHURC1-FNTBB4DL54 471 aa22.77■■□□□ 1.23
SOX1-201ENST00000330949 ARPC5O15511 151 aa22.77■■□□□ 1.23
SOX1-201ENST00000330949 VNN2O95498 520 aa22.77■■□□□ 1.23
SOX1-201ENST00000330949 GDNFP39905 211 aa22.77■■□□□ 1.23
SOX1-201ENST00000330949 OR5M10Q6IEU7 315 aa22.77■■□□□ 1.23
SOX1-201ENST00000330949 MED27Q6P2C8 311 aa22.77■■□□□ 1.23
SOX1-201ENST00000330949 OR10A4Q9H209 315 aa22.77■■□□□ 1.23
SOX1-201ENST00000330949 BIN3Q9NQY0 253 aa22.77■■□□□ 1.23
SOX1-201ENST00000330949 ANHXE9PGG2 379 aa22.76■■□□□ 1.23
SOX1-201ENST00000330949 CTDSPLO15194 276 aa22.76■■□□□ 1.23
SOX1-201ENST00000330949 SGTAO43765 313 aa22.76■■□□□ 1.23
SOX1-201ENST00000330949 KLKB1P03952 638 aa22.76■■□□□ 1.23
SOX1-201ENST00000330949 CKBP12277 381 aa22.76■■□□□ 1.23
SOX1-201ENST00000330949 FOSL1P15407 271 aa22.76■■□□□ 1.23
SOX1-201ENST00000330949 RAB13P51153 203 aa22.76■■□□□ 1.23
SOX1-201ENST00000330949 LSM11P83369 360 aaKnown RBP eCLIP22.76■■□□□ 1.23
SOX1-201ENST00000330949 GLDNQ6ZMI3 551 aaPredicted RBP22.76■■□□□ 1.23
SOX1-201ENST00000330949 OR4D10Q8NGI6 311 aa22.76■■□□□ 1.23
SOX1-201ENST00000330949 SORCS1Q8WY21 1168 aa22.76■■□□□ 1.23
SOX1-201ENST00000330949 THAP4Q8WY91 577 aa22.76■■□□□ 1.23
SOX1-201ENST00000330949 GSDMCQ9BYG8 508 aa22.76■■□□□ 1.23
SOX1-201ENST00000330949 PLCL2Q9UPR0 1127 aa22.76■■□□□ 1.23
SOX1-201ENST00000330949 BACE2Q9Y5Z0 518 aa22.76■■□□□ 1.23
SOX1-201ENST00000330949 GATBO75879 557 aaKnown RBP22.76■■□□□ 1.23
SOX1-201ENST00000330949 HIST1H2ABP04908 130 aa22.76■■□□□ 1.23
SOX1-201ENST00000330949 MC2RQ01718 297 aa22.76■■□□□ 1.23
SOX1-201ENST00000330949 PRKCZQ05513 592 aa22.76■■□□□ 1.23
SOX1-201ENST00000330949 IRF5Q13568 498 aa22.76■■□□□ 1.23
SOX1-201ENST00000330949 UBXN2BQ14CS0 331 aa22.76■■□□□ 1.23
SOX1-201ENST00000330949 HIST3H2AQ7L7L0 130 aa22.76■■□□□ 1.23
SOX1-201ENST00000330949 RNF180Q86T96 592 aa22.76■■□□□ 1.23
SOX1-201ENST00000330949 HIST1H2ACQ93077 130 aa22.76■■□□□ 1.23
SOX1-201ENST00000330949 ESRP2Q9H6T0 727 aaKnown RBP22.76■■□□□ 1.23
SOX1-201ENST00000330949 ISG20L2Q9H9L3 353 aaKnown RBP22.76■■□□□ 1.23
SOX1-201ENST00000330949 SLC6A20Q9NP91 592 aa22.76■■□□□ 1.23
SOX1-201ENST00000330949 MIEF1Q9NQG6 463 aa22.76■■□□□ 1.23
SOX1-201ENST00000330949 KLHL1Q9NR64 748 aa22.76■■□□□ 1.23
SOX1-201ENST00000330949 AKAP7Q9P0M2 348 aaPredicted RBP22.76■■□□□ 1.23
SOX1-201ENST00000330949 ZNF69Q9UC07 566 aa22.76■■□□□ 1.23
SOX1-201ENST00000330949 NPFFR2Q9Y5X5 522 aa22.76■■□□□ 1.23
SOX1-201ENST00000330949 M0R3H8 397 aa22.75■■□□□ 1.23
SOX1-201ENST00000330949 ZNF197O14709 1029 aa22.75■■□□□ 1.23
SOX1-201ENST00000330949 RASGRP1O95267 797 aa22.75■■□□□ 1.23
SOX1-201ENST00000330949 SAGP10523 405 aaPredicted RBP22.75■■□□□ 1.23
SOX1-201ENST00000330949 HTR1FP30939 366 aa22.75■■□□□ 1.23
SOX1-201ENST00000330949 PNLIPRP1P54315 467 aa22.75■■□□□ 1.23
SOX1-201ENST00000330949 TRAM1Q15629 374 aa22.75■■□□□ 1.23
SOX1-201ENST00000330949 TSC22D1Q15714 1073 aa22.75■■□□□ 1.23
SOX1-201ENST00000330949 SLC25A25Q6KCM7 469 aa22.75■■□□□ 1.23
SOX1-201ENST00000330949 AGTRAPQ6RW13 159 aa22.75■■□□□ 1.23
SOX1-201ENST00000330949 RAB11FIP2Q7L804 512 aa22.75■■□□□ 1.23
SOX1-201ENST00000330949 DMRTA2Q96SC8 542 aa22.75■■□□□ 1.23
SOX1-201ENST00000330949 NAP1L6A6NFF2 107 aa22.75■■□□□ 1.23
SOX1-201ENST00000330949 BNIP3LO60238 219 aa22.75■■□□□ 1.23
SOX1-201ENST00000330949 CREBL2O60519 120 aaPredicted RBP22.75■■□□□ 1.23
SOX1-201ENST00000330949 AQP8O94778 261 aa22.75■■□□□ 1.23
SOX1-201ENST00000330949 SERPIND1P05546 499 aa22.75■■□□□ 1.23
SOX1-201ENST00000330949 ATP5C1P36542 298 aaKnown RBP22.75■■□□□ 1.23
SOX1-201ENST00000330949 IFNGR2P38484 337 aa22.75■■□□□ 1.23
SOX1-201ENST00000330949 CCR8P51685 355 aa22.75■■□□□ 1.23
SOX1-201ENST00000330949 SLC25A35Q3KQZ1 300 aa22.75■■□□□ 1.23
SOX1-201ENST00000330949 FAM27D1Q5T7N8 215 aa22.75■■□□□ 1.23
SOX1-201ENST00000330949 HTR3DQ70Z44 454 aa22.75■■□□□ 1.23
SOX1-201ENST00000330949 CXXC5Q7LFL8 322 aaKnown RBP22.75■■□□□ 1.23
SOX1-201ENST00000330949 RAB8BQ92930 207 aa22.75■■□□□ 1.23
SOX1-201ENST00000330949 SLC6A16Q9GZN6 736 aa22.75■■□□□ 1.23
SOX1-201ENST00000330949 GPN1Q9HCN4 374 aaPredicted RBP22.75■■□□□ 1.23
SOX1-201ENST00000330949 TRIM36Q9NQ86 728 aa22.75■■□□□ 1.23
SOX1-201ENST00000330949 ICKQ9UPZ9 632 aa22.75■■□□□ 1.23
SOX1-201ENST00000330949 K7ERQ8 282 aa22.74■■□□□ 1.23
SOX1-201ENST00000330949 SEPT4O43236 478 aa22.74■■□□□ 1.23
SOX1-201ENST00000330949 SIX6O95475 246 aa22.74■■□□□ 1.23
SOX1-201ENST00000330949 CD53P19397 219 aa22.74■■□□□ 1.23
SOX1-201ENST00000330949 CLEC12AQ5QGZ9 265 aa22.74■■□□□ 1.23
SOX1-201ENST00000330949 ELFN2Q5R3F8 820 aa22.74■■□□□ 1.23
SOX1-201ENST00000330949 ZC3H14Q6PJT7 736 aaKnown RBP22.74■■□□□ 1.23
SOX1-201ENST00000330949 C10orf90Q96M02 699 aa22.74■■□□□ 1.23
SOX1-201ENST00000330949 BRD9Q9H8M2 597 aa22.74■■□□□ 1.23
SOX1-201ENST00000330949 NTMQ9P121 344 aa22.74■■□□□ 1.23
SOX1-201ENST00000330949 CTSFQ9UBX1 484 aa22.74■■□□□ 1.23
SOX1-201ENST00000330949 SIRT4Q9Y6E7 314 aaPredicted RBP22.74■■□□□ 1.23
SOX1-201ENST00000330949 VWA8A3KMH1 1905 aa22.74■■□□□ 1.23
SOX1-201ENST00000330949 ARPC1BO15143 372 aaKnown RBP22.74■■□□□ 1.23
SOX1-201ENST00000330949 HYAL3O43820 417 aaPredicted RBP22.74■■□□□ 1.23
SOX1-201ENST00000330949 CORO1AP31146 461 aaKnown RBP22.74■■□□□ 1.23
SOX1-201ENST00000330949 CCR9P51686 369 aa22.74■■□□□ 1.23
SOX1-201ENST00000330949 PRSS53Q2L4Q9 553 aa22.74■■□□□ 1.23
SOX1-201ENST00000330949 FAM209BQ5JX69 171 aa22.74■■□□□ 1.23
SOX1-201ENST00000330949 TMEM17Q86X19 198 aa22.74■■□□□ 1.23
SOX1-201ENST00000330949 FCRL4Q96PJ5 515 aa22.74■■□□□ 1.23
SOX1-201ENST00000330949 SLC25A32Q9H2D1 315 aa22.74■■□□□ 1.23
SOX1-201ENST00000330949 H2AFY2Q9P0M6 372 aaPredicted RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms