RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 MAP3K8P41279 467 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 ETV4P43268 484 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 ZFP36L2P47974 494 aaKnown RBP5.76□□□□□ -1.49
SMG1-201ENST00000330588 MASP1P48740 699 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 NUP107P57740 925 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 PSG6Q00889 435 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 C2orf80Q0P641 193 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 MAD2L1Q13257 205 aaPredicted RBP5.76□□□□□ -1.49
SMG1-201ENST00000330588 EXOSC7Q15024 291 aaKnown RBP5.76□□□□□ -1.49
SMG1-201ENST00000330588 ZNHIT3Q15649 155 aaPredicted RBP5.76□□□□□ -1.49
SMG1-201ENST00000330588 BCL2A1Q16548 175 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 GLYR1Q49A26 553 aaPredicted RBP5.76□□□□□ -1.49
SMG1-201ENST00000330588 VPS26BQ4G0F5 336 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 TNFAIP8L3Q5GJ75 292 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 NSUN5P2Q63ZY6 315 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 RTL6Q6ICC9 239 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 Q6ZSR9 355 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 ADGRE4PQ86SQ3 457 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 MCEMP1Q8IX19 187 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 ULK2Q8IYT8 1036 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 MMP21Q8N119 569 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 LILRA2Q8N149 483 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 OR7G2Q8NG99 324 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 OR5M3Q8NGP4 307 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 OR9A2Q8NGT5 310 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 CEP70Q8NHQ1 597 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 GOT1L1Q8NHS2 421 aaPredicted RBP5.76□□□□□ -1.49
SMG1-201ENST00000330588 MBD3L2Q8NHZ7 208 aaPredicted RBP5.76□□□□□ -1.49
SMG1-201ENST00000330588 PSMA8Q8TAA3 256 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 ZPLD1Q8TCW7 415 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 EXOSC8Q96B26 276 aaKnown RBP5.76□□□□□ -1.49
SMG1-201ENST00000330588 LRRC46Q96FV0 321 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 PPP3R2Q96LZ3 170 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 AMDHD1Q96NU7 426 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 REEP4Q9H6H4 257 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 SDHAF3Q9NRP4 125 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 PNPLA3Q9NST1 481 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 FAM120CQ9NX05 1096 aaKnown RBP5.76□□□□□ -1.49
SMG1-201ENST00000330588 SPRR3Q9UBC9 169 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 KCNN3Q9UGI6 736 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 ATP6V1HQ9UI12 483 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 RNF6Q9Y252 685 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 DNAJC15Q9Y5T4 150 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 WIF1Q9Y5W5 379 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 EML6Q6ZMW3 1958 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 USP9XQ93008 2570 aaPredicted RBP5.76□□□□□ -1.49
SMG1-201ENST00000330588 IGLV3-32A0A0A0MS00 114 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 SMIM23A6NLE4 172 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 FAM25EA8MYX2 175 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 G3V3Y1 287 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 UPK1AO00322 258 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 UGT2B11O75310 529 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 PDE9AO76083 593 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 KCNH1O95259 989 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 IL33O95760 270 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 BPGMP07738 259 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 DHRS4L1P0CG22 281 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 PRPS2P11908 318 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 SDC1P18827 310 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 IL12BP29460 328 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 NCBP2P52298 156 aaKnown RBP eCLIP5.76□□□□□ -1.49
SMG1-201ENST00000330588 GAS1P54826 345 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 PMPCAQ10713 525 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 LTB4RQ15722 352 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 DECR1Q16698 335 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.76□□□□□ -1.49
SMG1-201ENST00000330588 ACSF3Q4G176 576 aaPredicted RBP5.76□□□□□ -1.49
SMG1-201ENST00000330588 ARL13AQ5H913 290 aaPredicted RBP5.76□□□□□ -1.49
SMG1-201ENST00000330588 HIST2H2BCQ6DN03 193 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 CLEC6AQ6EIG7 209 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 ENPP6Q6UWR7 440 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 NPSR1Q6W5P4 371 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 CAMKMTQ7Z624 323 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 PLCZ1Q86YW0 608 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 C4orf33Q8N1A6 199 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 ARL6IP6Q8N6S5 226 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 FAM83FQ8NEG4 500 aaPredicted RBP5.76□□□□□ -1.49
SMG1-201ENST00000330588 TCP10LQ8TDR4 215 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 TWIST2Q8WVJ9 160 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 OIT3Q8WWZ8 545 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 ELP4Q96EB1 424 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 PGM2Q96G03 612 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 MS4A4EQ96PG1 132 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 FAM111AQ96PZ2 611 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 NODALQ96S42 347 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 TIMP4Q99727 224 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 EBPLQ9BY08 206 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 SLC6A15Q9H2J7 730 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 TUBB1Q9H4B7 451 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 GLIPR2Q9H4G4 154 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 EXO5Q9H790 373 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 Q9N2J8 555 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 TNFRSF12AQ9NP84 129 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 ATAD3AQ9NVI7 634 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 DDX18Q9NVP1 670 aaKnown RBP5.76□□□□□ -1.49
SMG1-201ENST00000330588 ZNF629Q9UEG4 869 aaPredicted RBP5.76□□□□□ -1.49
SMG1-201ENST00000330588 HAO1Q9UJM8 370 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 TRAF6Q9Y4K3 522 aa5.76□□□□□ -1.49
SMG1-201ENST00000330588 ARHGAP21Q5T5U3 1957 aa5.75□□□□□ -1.49
SMG1-201ENST00000330588 USP9YO00507 2555 aaPredicted RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms