RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 CACNG2Q9Y698 323 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 C7orf66A4D0T2 115 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 GSAPA4D1B5 854 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 LRIT2A6NDA9 550 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 KLF4O43474 513 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 PIP5K1CO60331 668 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 C8orf89P0DMQ9 161 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 ICAM2P13598 275 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 PTNP21246 168 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 TBXA2RP21731 343 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 AHRP35869 848 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 PITPNBP48739 271 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 OR10A3P58181 314 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 TRA2BP62995 288 aaKnown RBP12.55□□□□□ -0.4
SKA3-202ENST00000314759 ARHGAP19Q14CB8 494 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 NTRK2Q16620 822 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 LILRA6Q6PI73 481 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 TMEM64Q6YI46 380 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 ZNF620Q6ZNG0 422 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 AMZ2Q86W34 360 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 ACOT11Q8WXI4 607 aaPredicted RBP12.55□□□□□ -0.4
SKA3-202ENST00000314759 TOE1Q96GM8 510 aaKnown RBP12.55□□□□□ -0.4
SKA3-202ENST00000314759 JAM3Q9BX67 310 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 MED17Q9NVC6 651 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 BABAM2Q9NXR7 383 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 KCMF1Q9P0J7 381 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 H2AFY2Q9P0M6 372 aaPredicted RBP12.55□□□□□ -0.4
SKA3-202ENST00000314759 SLC13A4Q9UKG4 626 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 RASD1Q9Y272 281 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 ZC3H12DA2A288 527 aaKnown RBP12.55□□□□□ -0.4
SKA3-202ENST00000314759 CSNK1G2P78368 415 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 ADCK2Q7Z695 626 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 ADGRD2Q7Z7M1 963 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 TMEM255BQ8WV15 326 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 ARRDC3Q96B67 414 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 OR7D2Q96RA2 312 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 TBX5Q99593 518 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 AIFM2Q9BRQ8 373 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 TEX12Q9BXU0 123 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 EMC7Q9NPA0 242 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 EQTNQ9NQ60 294 aa12.55□□□□□ -0.4
SKA3-202ENST00000314759 C4orf51C9J302 202 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 CDC42EP2O14613 210 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 VEGFDO43915 354 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 NFATC1O95644 943 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 DHFRP00374 187 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 HOXD4P09016 255 aaPredicted RBP12.54□□□□□ -0.4
SKA3-202ENST00000314759 ANXA3P12429 323 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 RBMS1P29558 406 aaKnown RBP12.54□□□□□ -0.4
SKA3-202ENST00000314759 ANXA11P50995 505 aaKnown RBP12.54□□□□□ -0.4
SKA3-202ENST00000314759 TGM3Q08188 693 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 IKZF1Q13422 519 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 DECR1Q16698 335 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 COL28A1Q2UY09 1125 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 ARHGAP15Q53QZ3 475 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 RNASE12Q5GAN4 147 aaKnown RBP12.54□□□□□ -0.4
SKA3-202ENST00000314759 C6orf132Q5T0Z8 1188 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 BHLHB9Q6PI77 547 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 ZNF765Q7L2R6 523 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 PRSS42Q7Z5A4 293 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 GJD3Q8N144 294 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 LINC01555Q8NAE3 123 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 TOR1AIP2Q8NFQ8 470 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 OR2T33Q8NG76 320 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 LHFPL5Q8TAF8 219 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 SAMD8Q96LT4 415 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 TRMT61BQ9BVS5 477 aaKnown RBP12.54□□□□□ -0.4
SKA3-202ENST00000314759 MRPL39Q9NYK5 338 aaKnown RBP12.54□□□□□ -0.4
SKA3-202ENST00000314759 ATG4BQ9Y4P1 393 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 IRAK3Q9Y616 596 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 IGKV1-8A0A0C4DH67 115 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 A0A1W2PR48 441 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 TOXO94900 526 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 ZIC2O95409 532 aaPredicted RBP12.54□□□□□ -0.4
SKA3-202ENST00000314759 HRGP04196 525 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 NPR2P20594 1047 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 BDH1Q02338 343 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 DPTQ07507 201 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 CAMK2DQ13557 499 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 SLC36A2Q495M3 483 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 CLLU1Q5K131 121 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 PLBD1Q6P4A8 553 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 CXXC5Q7LFL8 322 aaKnown RBP12.54□□□□□ -0.4
SKA3-202ENST00000314759 GPALPP1Q8IXQ4 340 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 ACBD7Q8N6N7 88 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 ZBTB44Q8NCP5 570 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 KREMEN2Q8NCW0 462 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 ALG8Q9BVK2 526 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 FAIM2Q9BWQ8 316 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 OR51J1Q9H342 316 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 ANKRD19PQ9H560 264 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 MED20Q9H944 212 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 ZNF624Q9P2J8 865 aaPredicted RBP12.54□□□□□ -0.4
SKA3-202ENST00000314759 RABL2BQ9UNT1 228 aa12.54□□□□□ -0.4
SKA3-202ENST00000314759 PRR23AA6NEV1 266 aa12.53□□□□□ -0.4
SKA3-202ENST00000314759 FCMRO60667 390 aa12.53□□□□□ -0.4
SKA3-202ENST00000314759 MOSPD3O75425 235 aa12.53□□□□□ -0.4
SKA3-202ENST00000314759 RRASP10301 218 aa12.53□□□□□ -0.4
SKA3-202ENST00000314759 ACSL1P33121 698 aa12.53□□□□□ -0.4
SKA3-202ENST00000314759 BMP8BP34820 402 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms