RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 SLC35F2Q8IXU6 374 aa12.43□□□□□ -0.42
SNED1-201ENST00000310397 DCUN1D4Q92564 292 aa12.43□□□□□ -0.42
SNED1-201ENST00000310397 C16orf58Q96GQ5 468 aa12.43□□□□□ -0.42
SNED1-201ENST00000310397 TMEM121BQ9BXQ6 578 aaPredicted RBP12.43□□□□□ -0.42
SNED1-201ENST00000310397 PEX14O75381 377 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 DCNP07585 359 aaKnown RBP12.42□□□□□ -0.42
SNED1-201ENST00000310397 RPL35P42766 123 aaKnown RBP12.42□□□□□ -0.42
SNED1-201ENST00000310397 FIGNL1Q6PIW4 674 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 RNF111Q6ZNA4 994 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 PGAP1Q75T13 922 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 CDRT4Q8N9R6 151 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 MED30Q96HR3 178 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 NAA50Q9GZZ1 169 aaKnown RBP12.42□□□□□ -0.42
SNED1-201ENST00000310397 PARPBPQ9NWS1 579 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 FOCADQ5VW36 1801 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 OR8U9P0C7N5 309 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 CTXN1P60606 82 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 ZXDBP98169 803 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 MFSD13AQ14CX5 517 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 PLK5Q496M5 336 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 ZNF534Q76KX8 674 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 CSNK1A1LQ8N752 337 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 NIPAL2Q9H841 368 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 V9GY05 133 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 CTDSP2O14595 271 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 SLAMF8Q9P0V8 285 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 VSTM2BA6NLU5 285 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 GAPDHSO14556 408 aaPredicted RBP12.42□□□□□ -0.42
SNED1-201ENST00000310397 ZNF16P17020 682 aaPredicted RBP12.42□□□□□ -0.42
SNED1-201ENST00000310397 CRTC1Q6UUV9 634 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 MAVSQ7Z434 540 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 OR5H6Q8NGV6 325 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 ISL2Q96A47 359 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 PTCHD1Q96NR3 888 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 BABAM2Q9NXR7 383 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 OR1A2Q9Y585 309 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 RNF215Q9Y6U7 377 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 DOCK5Q9H7D0 1870 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 NPIPA2E9PIF3 369 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 NPIPA3F8WFD2 350 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 NFKBIEO00221 500 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 ARHGAP33O14559 1287 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 PPP1R3DO95685 299 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 CERS1P27544 350 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 PKDCCQ504Y2 493 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 SLC6A19Q695T7 634 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 SYNPRQ8TBG9 265 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 SMAP2Q8WU79 429 aaPredicted RBP12.42□□□□□ -0.42
SNED1-201ENST00000310397 RELTQ969Z4 430 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 SMG9Q9H0W8 520 aaKnown RBP12.42□□□□□ -0.42
SNED1-201ENST00000310397 ICKQ9UPZ9 632 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 NAALAD2Q9Y3Q0 740 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 CABIN1Q9Y6J0 2220 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 ARPC1BO15143 372 aaKnown RBP12.42□□□□□ -0.42
SNED1-201ENST00000310397 TYRP1P17643 537 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 DLSTP36957 453 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 AWAT2Q6E213 333 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 TMEM239Q8WW34 195 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 PGAM5Q96HS1 289 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 IL20RAQ9UHF4 553 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 SLC7A7Q9UM01 511 aa12.42□□□□□ -0.42
SNED1-201ENST00000310397 POLR2AP24928 1970 aaKnown RBP12.42□□□□□ -0.42
SNED1-201ENST00000310397 UNC13CQ8NB66 2214 aa12.41□□□□□ -0.42
SNED1-201ENST00000310397 LOC105369274A0A096LPK9 316 aa12.41□□□□□ -0.42
SNED1-201ENST00000310397 DRGXA6NNA5 263 aa12.41□□□□□ -0.42
SNED1-201ENST00000310397 ANKRD28O15084 1053 aa12.41□□□□□ -0.42
SNED1-201ENST00000310397 FZD7O75084 574 aa12.41□□□□□ -0.42
SNED1-201ENST00000310397 SMIM18P0DKX4 95 aa12.41□□□□□ -0.42
SNED1-201ENST00000310397 ADRA1AP35348 466 aa12.41□□□□□ -0.42
SNED1-201ENST00000310397 IL13RA1P78552 427 aa12.41□□□□□ -0.42
SNED1-201ENST00000310397 POU4F3Q15319 338 aa12.41□□□□□ -0.42
SNED1-201ENST00000310397 HMGN2P46Q86SG4 172 aa12.41□□□□□ -0.42
SNED1-201ENST00000310397 OR4N4Q8N0Y3 316 aa12.41□□□□□ -0.42
SNED1-201ENST00000310397 LSMEM2Q8N112 164 aa12.41□□□□□ -0.42
SNED1-201ENST00000310397 TMEM185AQ8NFB2 350 aa12.41□□□□□ -0.42
SNED1-201ENST00000310397 NEIL2Q969S2 332 aa12.41□□□□□ -0.42
SNED1-201ENST00000310397 SPIN2AQ99865 258 aa12.41□□□□□ -0.42
SNED1-201ENST00000310397 SPIN2BQ9BPZ2 258 aa12.41□□□□□ -0.42
SNED1-201ENST00000310397 IFNA4P05014 189 aa12.41□□□□□ -0.42
SNED1-201ENST00000310397 C6P13671 934 aa12.41□□□□□ -0.42
SNED1-201ENST00000310397 PTPN6P29350 595 aa12.41□□□□□ -0.42
SNED1-201ENST00000310397 AQP2P41181 271 aa12.41□□□□□ -0.42
SNED1-201ENST00000310397 APCDD1Q8J025 514 aa12.41□□□□□ -0.42
SNED1-201ENST00000310397 PITX2Q99697 317 aa12.41□□□□□ -0.42
SNED1-201ENST00000310397 DDX60LQ5H9U9 1706 aaKnown RBP12.41□□□□□ -0.42
SNED1-201ENST00000310397 GATMP50440 423 aa12.41□□□□□ -0.42
SNED1-201ENST00000310397 HBA1P69905 142 aa12.41□□□□□ -0.42
SNED1-201ENST00000310397 ZNF91Q05481 1191 aa12.41□□□□□ -0.42
SNED1-201ENST00000310397 C3orf38Q5JPI3 329 aa12.41□□□□□ -0.42
SNED1-201ENST00000310397 ZNF546Q86UE3 836 aa12.41□□□□□ -0.42
SNED1-201ENST00000310397 PAAF1Q9BRP4 392 aa12.41□□□□□ -0.42
SNED1-201ENST00000310397 CSNK1G1Q9HCP0 422 aa12.41□□□□□ -0.42
SNED1-201ENST00000310397 NRAPQ86VF7 1730 aa12.41□□□□□ -0.42
SNED1-201ENST00000310397 A0A0D9SG52 128 aa12.41□□□□□ -0.42
SNED1-201ENST00000310397 SYN1P17600 705 aa12.41□□□□□ -0.42
SNED1-201ENST00000310397 OC90Q02509 493 aaPredicted RBP12.41□□□□□ -0.42
SNED1-201ENST00000310397 TDGQ13569 410 aa12.41□□□□□ -0.42
SNED1-201ENST00000310397 RFPL4BQ6ZWI9 263 aa12.41□□□□□ -0.42
SNED1-201ENST00000310397 TRIM46Q7Z4K8 759 aa12.41□□□□□ -0.42
SNED1-201ENST00000310397 RETREG3Q86VR2 466 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms