RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 RPA4Q13156 261 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 TPBGQ13641 420 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 SEC23BQ15437 767 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 TATDN3Q17R31 274 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 KLHL22Q53GT1 634 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 PRAMEF14Q5SWL7 426 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 PRAMEF13Q5VWM6 474 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 C22orf42Q6IC83 251 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 CD300LDQ6UXZ3 194 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 QSOX2Q6ZRP7 698 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 Q6ZSR6 202 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 LAPTM4BQ86VI4 370 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 C9orf62Q8N4C0 152 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 CAMKK1Q8N5S9 505 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 TCEANCQ8N8B7 351 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 FBXO15Q8NCQ5 510 aaPredicted RBP9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 NLGN4YQ8NFZ3 816 aaPredicted RBP9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 TMEM163Q8TC26 289 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 SLC5A11Q8WWX8 675 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 ST8SIA4Q92187 359 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 PRAP1Q96NZ9 151 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 FUZQ9BT04 418 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 BEX2Q9BXY8 128 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 TCEAL2Q9H3H9 227 aaPredicted RBP9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 A4GALTQ9NPC4 353 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 MED9Q9NWA0 146 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 ICKQ9UPZ9 632 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 SF3B6Q9Y3B4 125 aaKnown RBP9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 ALG5Q9Y673 324 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 SNRNP200O75643 2136 aaKnown RBP9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 A0A1W2PRB8 838 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 GMDSO60547 372 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 SLC43A1O75387 559 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 TP53P04637 393 aaPredicted RBP9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 TPOP07202 933 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 H1F0P07305 194 aaKnown RBP9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 C1GALT1C1LP0DN25 315 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 PRKAR1AP10644 381 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 HNRNPA2B1P22626 353 aaKnown RBP9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 FGF9P31371 208 aaPredicted RBP9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 MRPL28Q13084 256 aaKnown RBP9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 GPR139Q6DWJ6 353 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 PGBD2Q6P3X8 592 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 PAQR6Q6TCH4 344 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 COMMD6Q7Z4G1 85 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 TMEM151BQ8IW70 566 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 DEFB123Q8N688 67 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 ZBTB44Q8NCP5 570 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 C19orf18Q8NEA5 215 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 OR13H1Q8NG92 308 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 KATNB1Q9BVA0 655 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 SORBS1Q9BX66 1292 aaKnown RBP9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 SHARPINQ9H0F6 387 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 POLR2J3Q9H1A7 115 aaKnown RBP9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 FGF20Q9NP95 211 aaPredicted RBP9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 ZSCAN32Q9NX65 697 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 FBXL21Q9UKT6 434 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 ACAD8Q9UKU7 415 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 HRH3Q9Y5N1 445 aa9.66□□□□□ -0.86
APOBEC3F-201ENST00000308521 TMEM129A0AVI4 362 aa9.65□□□□□ -0.86
APOBEC3F-201ENST00000308521 PIPSLA2A3N6 862 aa9.65□□□□□ -0.86
APOBEC3F-201ENST00000308521 KRBOX1C9JBD0 128 aa9.65□□□□□ -0.86
APOBEC3F-201ENST00000308521 FAM227AF5H4B4 570 aa9.65□□□□□ -0.86
APOBEC3F-201ENST00000308521 H3BN98 237 aa9.65□□□□□ -0.86
APOBEC3F-201ENST00000308521 ABCD4O14678 606 aa9.65□□□□□ -0.86
APOBEC3F-201ENST00000308521 KHNYNO15037 678 aaKnown RBP9.65□□□□□ -0.86
APOBEC3F-201ENST00000308521 OR10H3O60404 316 aa9.65□□□□□ -0.86
APOBEC3F-201ENST00000308521 KLHL18O94889 574 aa9.65□□□□□ -0.86
APOBEC3F-201ENST00000308521 IGHV4-34P06331 123 aa9.65□□□□□ -0.86
APOBEC3F-201ENST00000308521 IGFBP1P08833 259 aaPredicted RBP9.65□□□□□ -0.86
APOBEC3F-201ENST00000308521 FEN1P39748 380 aaKnown RBP9.65□□□□□ -0.86
APOBEC3F-201ENST00000308521 ETV5P41161 510 aa9.65□□□□□ -0.86
APOBEC3F-201ENST00000308521 ACTR1BP42025 376 aa9.65□□□□□ -0.86
APOBEC3F-201ENST00000308521 WNT4P56705 351 aa9.65□□□□□ -0.86
APOBEC3F-201ENST00000308521 ACTR1AP61163 376 aa9.65□□□□□ -0.86
APOBEC3F-201ENST00000308521 MC1RQ01726 317 aa9.65□□□□□ -0.86
APOBEC3F-201ENST00000308521 FLYWCH1Q4VC44 716 aa9.65□□□□□ -0.86
APOBEC3F-201ENST00000308521 TRIQKQ629K1 86 aa9.65□□□□□ -0.86
APOBEC3F-201ENST00000308521 TCTN3Q6NUS6 607 aa9.65□□□□□ -0.86
APOBEC3F-201ENST00000308521 NXPE4Q6UWF7 544 aa9.65□□□□□ -0.86
APOBEC3F-201ENST00000308521 WDR53Q7Z5U6 358 aaPredicted RBP9.65□□□□□ -0.86
APOBEC3F-201ENST00000308521 ADCK2Q7Z695 626 aa9.65□□□□□ -0.86
APOBEC3F-201ENST00000308521 OR5AK3PQ8NH89 298 aa9.65□□□□□ -0.86
APOBEC3F-201ENST00000308521 PATE1Q8WXA2 126 aa9.65□□□□□ -0.86
APOBEC3F-201ENST00000308521 FGF11Q92914 225 aa9.65□□□□□ -0.86
APOBEC3F-201ENST00000308521 RBPMSQ93062 196 aaKnown RBP9.65□□□□□ -0.86
APOBEC3F-201ENST00000308521 MARVELD1Q9BSK0 173 aa9.65□□□□□ -0.86
APOBEC3F-201ENST00000308521 MENTQ9BUN1 341 aa9.65□□□□□ -0.86
APOBEC3F-201ENST00000308521 RANBP3Q9H6Z4 567 aaPredicted RBP9.65□□□□□ -0.86
APOBEC3F-201ENST00000308521 SLC2A4RGQ9NR83 387 aa9.65□□□□□ -0.86
APOBEC3F-201ENST00000308521 GSTK1Q9Y2Q3 226 aa9.65□□□□□ -0.86
APOBEC3F-201ENST00000308521 SESN1Q9Y6P5 492 aa9.65□□□□□ -0.86
APOBEC3F-201ENST00000308521 RNF215Q9Y6U7 377 aa9.65□□□□□ -0.86
APOBEC3F-201ENST00000308521 CACNA1IQ9P0X4 2223 aa9.65□□□□□ -0.86
APOBEC3F-201ENST00000308521 SLC30A4O14863 429 aa9.65□□□□□ -0.87
APOBEC3F-201ENST00000308521 AKR7A2O43488 359 aa9.65□□□□□ -0.87
APOBEC3F-201ENST00000308521 SOX14O95416 240 aa9.65□□□□□ -0.87
APOBEC3F-201ENST00000308521 SLC2A2P11168 524 aaPredicted RBP9.65□□□□□ -0.87
APOBEC3F-201ENST00000308521 MAN2A2P49641 1150 aa9.65□□□□□ -0.87
APOBEC3F-201ENST00000308521 GAS1P54826 345 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms