RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 DFFBO76075 338 aa12.71□□□□□ -0.37
TRIM56-201ENST00000306085 C11orf42Q8N5U0 333 aa12.71□□□□□ -0.37
TRIM56-201ENST00000306085 PDZD7Q9H5P4 517 aa12.71□□□□□ -0.37
TRIM56-201ENST00000306085 TIMP2P16035 220 aa12.71□□□□□ -0.38
TRIM56-201ENST00000306085 SERPINA2P20848 420 aa12.71□□□□□ -0.38
TRIM56-201ENST00000306085 TLE4Q04727 773 aa12.71□□□□□ -0.38
TRIM56-201ENST00000306085 OR9A2Q8NGT5 310 aa12.71□□□□□ -0.38
TRIM56-201ENST00000306085 NSUN3Q9H649 340 aaKnown RBP12.71□□□□□ -0.38
TRIM56-201ENST00000306085 EHFQ9NZC4 300 aa12.71□□□□□ -0.38
TRIM56-201ENST00000306085 RNF212BA8MTL3 300 aa12.71□□□□□ -0.38
TRIM56-201ENST00000306085 RFXAPO00287 272 aa12.71□□□□□ -0.38
TRIM56-201ENST00000306085 MEF2DQ14814 521 aa12.71□□□□□ -0.38
TRIM56-201ENST00000306085 P2RY14Q15391 338 aa12.71□□□□□ -0.38
TRIM56-201ENST00000306085 C3orf38Q5JPI3 329 aa12.71□□□□□ -0.38
TRIM56-201ENST00000306085 UBE2NLQ5JXB2 153 aa12.71□□□□□ -0.38
TRIM56-201ENST00000306085 RNLSQ5VYX0 342 aa12.71□□□□□ -0.38
TRIM56-201ENST00000306085 TMEM104Q8NE00 496 aa12.71□□□□□ -0.38
TRIM56-201ENST00000306085 OR5W2Q8NH69 310 aa12.71□□□□□ -0.38
TRIM56-201ENST00000306085 CD244Q9BZW8 370 aa12.71□□□□□ -0.38
TRIM56-201ENST00000306085 HRASLS2Q9NWW9 162 aa12.71□□□□□ -0.38
TRIM56-201ENST00000306085 ACPPP15309 386 aa12.71□□□□□ -0.38
TRIM56-201ENST00000306085 HNF1AP20823 631 aa12.71□□□□□ -0.38
TRIM56-201ENST00000306085 HNRNPDQ14103 355 aaKnown RBP12.71□□□□□ -0.38
TRIM56-201ENST00000306085 FAM212BQ9NTI7 297 aaPredicted RBP12.71□□□□□ -0.38
TRIM56-201ENST00000306085 NPIPA5A0A0B4J1W7 369 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 CT45A6P0DMU7 189 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 CT45A5P0DMU8 189 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 CT45A7P0DMV0 189 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 CT45A8P0DMV1 189 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 CT45A9P0DMV2 189 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 PTAFRP25105 342 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 LMO2P25791 158 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 PRDX3P30048 256 aaKnown RBP12.7□□□□□ -0.38
TRIM56-201ENST00000306085 CT45A2Q5DJT8 189 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 CT45A1Q5HYN5 189 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 NANOGP8Q6NSW7 305 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 CT45A3Q8NHU0 189 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 NANPQ8TBE9 248 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 NANOGQ9H9S0 305 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 UPK1BO75841 260 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 NSA2O95478 260 aaKnown RBP12.7□□□□□ -0.38
TRIM56-201ENST00000306085 MZT1Q08AG7 82 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 IL17AQ16552 155 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 MBLAC2Q68D91 279 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 RBMS3Q6XE24 437 aaKnown RBP12.7□□□□□ -0.38
TRIM56-201ENST00000306085 NPAS4Q8IUM7 802 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 KCNK12Q9HB15 430 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 DTLQ9NZJ0 730 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 SOCS6O14544 535 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 OR4D2P58180 307 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 EMX2Q04743 252 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 NXPE4Q6UWF7 544 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 ABHD11Q8NFV4 315 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 ARSGQ96EG1 525 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 TMPRSS5Q9H3S3 457 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 SPEF2Q9C093 1822 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 MYBPHLA2RUH7 354 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 UPK3BL1B0FP48 263 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 UPK3BL2E5RIL1 263 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 DLX3O60479 287 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 EIF2DP41214 584 aaKnown RBP12.7□□□□□ -0.38
TRIM56-201ENST00000306085 KCTD13Q8WZ19 329 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 PADI3Q9ULW8 664 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 AQP7O14520 342 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 ZNF776Q68DI1 518 aaPredicted RBP12.7□□□□□ -0.38
TRIM56-201ENST00000306085 LSMEM2Q8N112 164 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 CLDN19Q8N6F1 224 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 OR14L1PQ8NHC6 308 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 OR5B2Q96R09 309 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 FETUBQ9UGM5 382 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 NTF3P20783 257 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 GABARAPL2P60520 117 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 AAK1Q2M2I8 961 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 OR5D16Q8NGK9 328 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 CARD18P57730 90 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 SLC9A3R2Q15599 337 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 KHDC1LQ5JSQ8 128 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 AADACL3Q5VUY0 350 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 OR4M1Q8NGD0 313 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 THAP7Q9BT49 309 aaPredicted RBP12.7□□□□□ -0.38
TRIM56-201ENST00000306085 DERL2Q9GZP9 239 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 FTSJ1Q9UET6 329 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 ANKRD30BLA7E2S9 258 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 CXorf49A8MYA2 514 aaPredicted RBP12.7□□□□□ -0.38
TRIM56-201ENST00000306085 NFKBIEO00221 500 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 TK1P04183 234 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 ENPP6Q6UWR7 440 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 OR2T4Q8NH00 348 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 ZFAND1Q8TCF1 268 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 ANKRD9Q96BM1 317 aaPredicted RBP12.7□□□□□ -0.38
TRIM56-201ENST00000306085 CDKN2AIPNLQ96HQ2 116 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 C20orf24Q9BUV8 137 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 PREX2Q70Z35 1606 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 FEZF1A0PJY2 475 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 MBP02144 154 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 SBSNQ6UWP8 590 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 SPARTQ8N0X7 666 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 LRRC25Q8N386 305 aaPredicted RBP12.7□□□□□ -0.38
TRIM56-201ENST00000306085 ELP4Q96EB1 424 aa12.7□□□□□ -0.38
TRIM56-201ENST00000306085 C14orf79Q96F83 325 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms