RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 CDC73Q6P1J9 531 aa19.34■□□□□ 0.69
SMCO4-201ENST00000298966 C3P1Q6ZMU1 363 aa19.34■□□□□ 0.69
SMCO4-201ENST00000298966 PATL1Q86TB9 770 aaKnown RBP19.34■□□□□ 0.69
SMCO4-201ENST00000298966 VWA5B2Q8N398 1253 aa19.34■□□□□ 0.69
SMCO4-201ENST00000298966 OR7G2Q8NG99 324 aa19.34■□□□□ 0.69
SMCO4-201ENST00000298966 CANT1Q8WVQ1 401 aa19.34■□□□□ 0.69
SMCO4-201ENST00000298966 RIT1Q92963 219 aa19.34■□□□□ 0.69
SMCO4-201ENST00000298966 ART5Q96L15 291 aa19.34■□□□□ 0.69
SMCO4-201ENST00000298966 PTCHD1Q96NR3 888 aa19.34■□□□□ 0.69
SMCO4-201ENST00000298966 MAGIXQ9H6Y5 334 aa19.34■□□□□ 0.69
SMCO4-201ENST00000298966 DCAF13Q9NV06 445 aaKnown RBP19.34■□□□□ 0.69
SMCO4-201ENST00000298966 EXD2Q9NVH0 621 aa19.34■□□□□ 0.69
SMCO4-201ENST00000298966 ANKRD10Q9NXR5 420 aa19.34■□□□□ 0.69
SMCO4-201ENST00000298966 ZNF639Q9UID6 485 aa19.34■□□□□ 0.69
SMCO4-201ENST00000298966 RIMS3Q9UJD0 308 aa19.34■□□□□ 0.69
SMCO4-201ENST00000298966 CLDN16Q9Y5I7 305 aa19.34■□□□□ 0.69
SMCO4-201ENST00000298966 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.33■□□□□ 0.68
SMCO4-201ENST00000298966 IGHV3-20A0A0C4DH32 117 aa19.33■□□□□ 0.68
SMCO4-201ENST00000298966 A0A1W2PS29 197 aa19.33■□□□□ 0.68
SMCO4-201ENST00000298966 C5orf58C9J3I9 102 aa19.33■□□□□ 0.68
SMCO4-201ENST00000298966 C1QCP02747 245 aa19.33■□□□□ 0.68
SMCO4-201ENST00000298966 KDELR2P33947 212 aa19.33■□□□□ 0.68
SMCO4-201ENST00000298966 EFNA3P52797 238 aa19.33■□□□□ 0.68
SMCO4-201ENST00000298966 SESN3P58005 492 aa19.33■□□□□ 0.68
SMCO4-201ENST00000298966 ID2Q02363 134 aa19.33■□□□□ 0.68
SMCO4-201ENST00000298966 LTB4RQ15722 352 aa19.33■□□□□ 0.68
SMCO4-201ENST00000298966 FAM98BQ52LJ0 330 aaKnown RBP19.33■□□□□ 0.68
SMCO4-201ENST00000298966 ATAD3BQ5T9A4 648 aa19.33■□□□□ 0.68
SMCO4-201ENST00000298966 MFSD4BQ5TF39 518 aa19.33■□□□□ 0.68
SMCO4-201ENST00000298966 REEP3Q6NUK4 255 aa19.33■□□□□ 0.68
SMCO4-201ENST00000298966 MFSD12Q6NUT3 480 aa19.33■□□□□ 0.68
SMCO4-201ENST00000298966 GALNTL5Q7Z4T8 443 aa19.33■□□□□ 0.68
SMCO4-201ENST00000298966 CPEB2Q7Z5Q1 589 aaKnown RBP19.33■□□□□ 0.68
SMCO4-201ENST00000298966 SIAH3Q8IW03 269 aa19.33■□□□□ 0.68
SMCO4-201ENST00000298966 HORMAD2Q8N7B1 307 aa19.33■□□□□ 0.68
SMCO4-201ENST00000298966 CDRT4Q8N9R6 151 aa19.33■□□□□ 0.68
SMCO4-201ENST00000298966 OR7G1Q8NGA0 311 aa19.33■□□□□ 0.68
SMCO4-201ENST00000298966 KAT2AQ92830 837 aa19.33■□□□□ 0.68
SMCO4-201ENST00000298966 GIMAP5Q96F15 307 aa19.33■□□□□ 0.68
SMCO4-201ENST00000298966 STACQ99469 402 aa19.33■□□□□ 0.68
SMCO4-201ENST00000298966 RBCK1Q9BYM8 510 aa19.33■□□□□ 0.68
SMCO4-201ENST00000298966 OR51I1Q9H343 314 aa19.33■□□□□ 0.68
SMCO4-201ENST00000298966 ADAP2Q9NPF8 381 aa19.33■□□□□ 0.68
SMCO4-201ENST00000298966 HCFC1P51610 2035 aa19.33■□□□□ 0.68
SMCO4-201ENST00000298966 ABCA4P78363 2273 aa19.33■□□□□ 0.68
SMCO4-201ENST00000298966 PRRC2AP48634 2157 aaKnown RBP19.32■□□□□ 0.68
SMCO4-201ENST00000298966 FAM221AA4D161 298 aa19.32■□□□□ 0.68
SMCO4-201ENST00000298966 HMGN4O00479 90 aa19.32■□□□□ 0.68
SMCO4-201ENST00000298966 ADAM10O14672 748 aa19.32■□□□□ 0.68
SMCO4-201ENST00000298966 ZNHIT1O43257 154 aa19.32■□□□□ 0.68
SMCO4-201ENST00000298966 AK1P00568 194 aa19.32■□□□□ 0.68
SMCO4-201ENST00000298966 PRKAG1P54619 331 aa19.32■□□□□ 0.68
SMCO4-201ENST00000298966 HSF1Q00613 529 aa19.32■□□□□ 0.68
SMCO4-201ENST00000298966 RHAGQ02094 409 aa19.32■□□□□ 0.68
SMCO4-201ENST00000298966 OC90Q02509 493 aaPredicted RBP19.32■□□□□ 0.68
SMCO4-201ENST00000298966 MGAT2Q10469 447 aa19.32■□□□□ 0.68
SMCO4-201ENST00000298966 LASP1Q14847 261 aaKnown RBP19.32■□□□□ 0.68
SMCO4-201ENST00000298966 ELAVL1Q15717 326 aaKnown RBP19.32■□□□□ 0.68
SMCO4-201ENST00000298966 MINDY4Q4G0A6 757 aa19.32■□□□□ 0.68
SMCO4-201ENST00000298966 SPINK14Q6IE38 97 aa19.32■□□□□ 0.68
SMCO4-201ENST00000298966 FKBP9P1Q75LS8 142 aa19.32■□□□□ 0.68
SMCO4-201ENST00000298966 TMEM200AQ86VY9 491 aa19.32■□□□□ 0.68
SMCO4-201ENST00000298966 ADCY4Q8NFM4 1077 aa19.32■□□□□ 0.68
SMCO4-201ENST00000298966 ADAMTS15Q8TE58 950 aa19.32■□□□□ 0.68
SMCO4-201ENST00000298966 NRG4Q8WWG1 115 aa19.32■□□□□ 0.68
SMCO4-201ENST00000298966 RASSF5Q8WWW0 418 aa19.32■□□□□ 0.68
SMCO4-201ENST00000298966 VN1R1Q9GZP7 353 aa19.32■□□□□ 0.68
SMCO4-201ENST00000298966 VCX3BQ9H321 246 aa19.32■□□□□ 0.68
SMCO4-201ENST00000298966 BCL2L10Q9HD36 194 aa19.32■□□□□ 0.68
SMCO4-201ENST00000298966 ADPRHL2Q9NX46 363 aa19.32■□□□□ 0.68
SMCO4-201ENST00000298966 TNFRSF10DQ9UBN6 386 aa19.32■□□□□ 0.68
SMCO4-201ENST00000298966 CFL2Q9Y281 166 aa19.32■□□□□ 0.68
SMCO4-201ENST00000298966 TCRBV16S1A1N1A0A5B0 115 aa19.31■□□□□ 0.68
SMCO4-201ENST00000298966 CDC123O75794 336 aaPredicted RBP19.31■□□□□ 0.68
SMCO4-201ENST00000298966 SP1P08047 785 aa19.31■□□□□ 0.68
SMCO4-201ENST00000298966 TFPTP0C1Z6 253 aa19.31■□□□□ 0.68
SMCO4-201ENST00000298966 ST13P50502 369 aaKnown RBP19.31■□□□□ 0.68
SMCO4-201ENST00000298966 CLCN2P51788 898 aa19.31■□□□□ 0.68
SMCO4-201ENST00000298966 CRISP3P54108 245 aa19.31■□□□□ 0.68
SMCO4-201ENST00000298966 PCBP3P57721 371 aaKnown RBP19.31■□□□□ 0.68
SMCO4-201ENST00000298966 BTG2P78543 158 aa19.31■□□□□ 0.68
SMCO4-201ENST00000298966 MRPS35P82673 323 aaKnown RBP19.31■□□□□ 0.68
SMCO4-201ENST00000298966 CHRNB3Q05901 458 aa19.31■□□□□ 0.68
SMCO4-201ENST00000298966 FUT7Q11130 342 aa19.31■□□□□ 0.68
SMCO4-201ENST00000298966 TBCELQ5QJ74 424 aa19.31■□□□□ 0.68
SMCO4-201ENST00000298966 EXOSC6Q5RKV6 272 aaKnown RBP19.31■□□□□ 0.68
SMCO4-201ENST00000298966 SLC25A25Q6KCM7 469 aa19.31■□□□□ 0.68
SMCO4-201ENST00000298966 TNFAIP8L2Q6P589 184 aaPredicted RBP19.31■□□□□ 0.68
SMCO4-201ENST00000298966 LANCL3Q6ZV70 420 aa19.31■□□□□ 0.68
SMCO4-201ENST00000298966 CBLL1Q75N03 491 aa19.31■□□□□ 0.68
SMCO4-201ENST00000298966 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.31■□□□□ 0.68
SMCO4-201ENST00000298966 OR14A16Q8NHC5 309 aa19.31■□□□□ 0.68
SMCO4-201ENST00000298966 LZICQ8WZA0 190 aa19.31■□□□□ 0.68
SMCO4-201ENST00000298966 HOXB13Q92826 284 aaPredicted RBP19.31■□□□□ 0.68
SMCO4-201ENST00000298966 PMM1Q92871 262 aa19.31■□□□□ 0.68
SMCO4-201ENST00000298966 DAZLQ92904 295 aaKnown RBP19.31■□□□□ 0.68
SMCO4-201ENST00000298966 ZNF559Q9BR84 538 aa19.31■□□□□ 0.68
SMCO4-201ENST00000298966 SPATA5L1Q9BVQ7 753 aa19.31■□□□□ 0.68
SMCO4-201ENST00000298966 NECTIN3Q9NQS3 549 aa19.31■□□□□ 0.68
SMCO4-201ENST00000298966 DUSP22Q9NRW4 184 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms