RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 GPR137Q96N19 417 aa11.63□□□□□ -0.55
SS18-202ENST00000269138 LRRC37BQ96QE4 947 aa11.63□□□□□ -0.55
SS18-202ENST00000269138 KLHDC3Q9BQ90 382 aa11.63□□□□□ -0.55
SS18-202ENST00000269138 THUMPD3Q9BV44 507 aaKnown RBP11.63□□□□□ -0.55
SS18-202ENST00000269138 HOXD1Q9GZZ0 328 aa11.63□□□□□ -0.55
SS18-202ENST00000269138 SAP130Q9H0E3 1048 aa11.63□□□□□ -0.55
SS18-202ENST00000269138 QRSL1Q9H0R6 528 aaKnown RBP11.63□□□□□ -0.55
SS18-202ENST00000269138 UBQLN3Q9H347 655 aa11.63□□□□□ -0.55
SS18-202ENST00000269138 DSN1Q9H410 356 aa11.63□□□□□ -0.55
SS18-202ENST00000269138 NANOGQ9H9S0 305 aa11.63□□□□□ -0.55
SS18-202ENST00000269138 ARL8BQ9NVJ2 186 aa11.63□□□□□ -0.55
SS18-202ENST00000269138 PPP4R1LQ9P1A2 415 aa11.63□□□□□ -0.55
SS18-202ENST00000269138 SEC14L3Q9UDX4 400 aa11.63□□□□□ -0.55
SS18-202ENST00000269138 LIPT1Q9Y234 373 aa11.63□□□□□ -0.55
SS18-202ENST00000269138 NBASA2RRP1 2371 aa11.63□□□□□ -0.55
SS18-202ENST00000269138 NDUFB5O43674 189 aa11.62□□□□□ -0.55
SS18-202ENST00000269138 GMFGO60234 142 aa11.62□□□□□ -0.55
SS18-202ENST00000269138 UGT2B17O75795 530 aa11.62□□□□□ -0.55
SS18-202ENST00000269138 DCTN3O75935 186 aa11.62□□□□□ -0.55
SS18-202ENST00000269138 BCHEP06276 602 aa11.62□□□□□ -0.55
SS18-202ENST00000269138 EDN3P14138 238 aa11.62□□□□□ -0.55
SS18-202ENST00000269138 HPGDP15428 266 aa11.62□□□□□ -0.55
SS18-202ENST00000269138 GDF1P27539 372 aa11.62□□□□□ -0.55
SS18-202ENST00000269138 UQCRFS1P47985 274 aa11.62□□□□□ -0.55
SS18-202ENST00000269138 CLK3P49761 638 aaKnown RBP11.62□□□□□ -0.55
SS18-202ENST00000269138 SLC10A1Q14973 349 aa11.62□□□□□ -0.55
SS18-202ENST00000269138 ZNF141Q15928 474 aa11.62□□□□□ -0.55
SS18-202ENST00000269138 ADRM1Q16186 407 aa11.62□□□□□ -0.55
SS18-202ENST00000269138 NDUFAF6Q330K2 333 aa11.62□□□□□ -0.55
SS18-202ENST00000269138 RABL3Q5HYI8 236 aa11.62□□□□□ -0.55
SS18-202ENST00000269138 RPS26P11Q5JNZ5 115 aaPredicted RBP11.62□□□□□ -0.55
SS18-202ENST00000269138 GCNT6Q5T4J0 391 aa11.62□□□□□ -0.55
SS18-202ENST00000269138 AP1ARQ63HQ0 302 aa11.62□□□□□ -0.55
SS18-202ENST00000269138 LRRC74BQ6ZQY2 392 aa11.62□□□□□ -0.55
SS18-202ENST00000269138 FGD2Q7Z6J4 655 aa11.62□□□□□ -0.55
SS18-202ENST00000269138 ZNF619Q8N2I2 560 aa11.62□□□□□ -0.55
SS18-202ENST00000269138 ZNF614Q8N883 585 aa11.62□□□□□ -0.55
SS18-202ENST00000269138 PCYOX1LQ8NBM8 494 aa11.62□□□□□ -0.55
SS18-202ENST00000269138 OR2M3Q8NG83 312 aa11.62□□□□□ -0.55
SS18-202ENST00000269138 BCAS4Q8TDM0 211 aa11.62□□□□□ -0.55
SS18-202ENST00000269138 TMEM19Q96HH6 336 aa11.62□□□□□ -0.55
SS18-202ENST00000269138 SLC6A15Q9H2J7 730 aa11.62□□□□□ -0.55
SS18-202ENST00000269138 A4GALTQ9NPC4 353 aa11.62□□□□□ -0.55
SS18-202ENST00000269138 POLE3Q9NRF9 147 aa11.62□□□□□ -0.55
SS18-202ENST00000269138 SDHAF3Q9NRP4 125 aa11.62□□□□□ -0.55
SS18-202ENST00000269138 P2RX2Q9UBL9 471 aa11.62□□□□□ -0.55
SS18-202ENST00000269138 DTNAQ9Y4J8 743 aa11.62□□□□□ -0.55
SS18-202ENST00000269138 A0A1W2PQD3 144 aa11.61□□□□□ -0.55
SS18-202ENST00000269138 NDUFAB1O14561 156 aa11.61□□□□□ -0.55
SS18-202ENST00000269138 TRAPPC6AO75865 159 aa11.61□□□□□ -0.55
SS18-202ENST00000269138 GUSBP08236 651 aa11.61□□□□□ -0.55
SS18-202ENST00000269138 ARAFP10398 606 aa11.61□□□□□ -0.55
SS18-202ENST00000269138 GNLYP22749 145 aa11.61□□□□□ -0.55
SS18-202ENST00000269138 ELAVL4P26378 380 aaKnown RBP11.61□□□□□ -0.55
SS18-202ENST00000269138 PRDX6P30041 224 aa11.61□□□□□ -0.55
SS18-202ENST00000269138 CPA2P48052 419 aa11.61□□□□□ -0.55
SS18-202ENST00000269138 HPCAP84074 193 aa11.61□□□□□ -0.55
SS18-202ENST00000269138 TOMM20Q15388 145 aa11.61□□□□□ -0.55
SS18-202ENST00000269138 EIPR1Q53HC9 387 aa11.61□□□□□ -0.55
SS18-202ENST00000269138 KRTCAP3Q53RY4 240 aa11.61□□□□□ -0.55
SS18-202ENST00000269138 GFRALQ6UXV0 394 aa11.61□□□□□ -0.55
SS18-202ENST00000269138 PTOV1Q86YD1 416 aa11.61□□□□□ -0.55
SS18-202ENST00000269138 SPPL2CQ8IUH8 684 aa11.61□□□□□ -0.55
SS18-202ENST00000269138 CHERPQ8IWX8 916 aaKnown RBP11.61□□□□□ -0.55
SS18-202ENST00000269138 FITM2Q8N6M3 262 aa11.61□□□□□ -0.55
SS18-202ENST00000269138 FADS6Q8N9I5 356 aa11.61□□□□□ -0.55
SS18-202ENST00000269138 GALNT11Q8NCW6 608 aa11.61□□□□□ -0.55
SS18-202ENST00000269138 ST6GALNAC3Q8NDV1 305 aa11.61□□□□□ -0.55
SS18-202ENST00000269138 OR4K17Q8NGC6 315 aa11.61□□□□□ -0.55
SS18-202ENST00000269138 NFKBIDQ8NI38 313 aa11.61□□□□□ -0.55
SS18-202ENST00000269138 PHOSPHO1Q8TCT1 267 aa11.61□□□□□ -0.55
SS18-202ENST00000269138 CMTM5Q96DZ9 223 aa11.61□□□□□ -0.55
SS18-202ENST00000269138 SH3YL1Q96HL8 342 aaPredicted RBP11.61□□□□□ -0.55
SS18-202ENST00000269138 PIF1Q9H611 641 aa11.61□□□□□ -0.55
SS18-202ENST00000269138 KAT8Q9H7Z6 458 aaKnown RBP11.61□□□□□ -0.55
SS18-202ENST00000269138 GID8Q9NWU2 228 aa11.61□□□□□ -0.55
SS18-202ENST00000269138 THUMPD1Q9NXG2 353 aaKnown RBP11.61□□□□□ -0.55
SS18-202ENST00000269138 B4GALT7Q9UBV7 327 aa11.61□□□□□ -0.55
SS18-202ENST00000269138 CORO2BQ9UQ03 480 aa11.61□□□□□ -0.55
SS18-202ENST00000269138 SVILO95425 2214 aa11.61□□□□□ -0.55
SS18-202ENST00000269138 IGLV3-32A0A0A0MS00 114 aa11.6□□□□□ -0.55
SS18-202ENST00000269138 A0A1B0GTH9 108 aa11.6□□□□□ -0.55
SS18-202ENST00000269138 ANKUB1A6NFN9 424 aa11.6□□□□□ -0.55
SS18-202ENST00000269138 SERINC4A6NH21 518 aa11.6□□□□□ -0.55
SS18-202ENST00000269138 CLDN24A6NM45 220 aa11.6□□□□□ -0.55
SS18-202ENST00000269138 BCAS1O75363 584 aaPredicted RBP11.6□□□□□ -0.55
SS18-202ENST00000269138 CBR3O75828 277 aa11.6□□□□□ -0.55
SS18-202ENST00000269138 NPPAP01160 153 aa11.6□□□□□ -0.55
SS18-202ENST00000269138 TCEA1P23193 301 aaKnown RBP11.6□□□□□ -0.55
SS18-202ENST00000269138 GZMMP51124 257 aa11.6□□□□□ -0.55
SS18-202ENST00000269138 C17orf67Q0P5P2 114 aa11.6□□□□□ -0.55
SS18-202ENST00000269138 WIPI1Q5MNZ9 446 aaPredicted RBP11.6□□□□□ -0.55
SS18-202ENST00000269138 BNC2Q6ZN30 1099 aaPredicted RBP11.6□□□□□ -0.55
SS18-202ENST00000269138 TRILQ7L0X0 811 aa11.6□□□□□ -0.55
SS18-202ENST00000269138 YRDCQ86U90 279 aaKnown RBP11.6□□□□□ -0.55
SS18-202ENST00000269138 ZNF527Q8NB42 609 aa11.6□□□□□ -0.55
SS18-202ENST00000269138 FAM83FQ8NEG4 500 aaPredicted RBP11.6□□□□□ -0.55
SS18-202ENST00000269138 OR10A6Q8NH74 314 aa11.6□□□□□ -0.55
SS18-202ENST00000269138 ARSGQ96EG1 525 aa11.6□□□□□ -0.55
SS18-202ENST00000269138 TREX2Q9BQ50 279 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms