RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 KCNN2Q9H2S1 579 aa21.1■□□□□ 0.97
MCF2L-201ENST00000261963 POLMQ9NP87 494 aaPredicted RBP21.1■□□□□ 0.97
MCF2L-201ENST00000261963 MALT1Q9UDY8 824 aa21.1■□□□□ 0.97
MCF2L-201ENST00000261963 CASC3O15234 703 aaKnown RBP21.1■□□□□ 0.97
MCF2L-201ENST00000261963 EFNB1P98172 346 aa21.1■□□□□ 0.97
MCF2L-201ENST00000261963 COL9A2Q14055 689 aaPredicted RBP21.1■□□□□ 0.97
MCF2L-201ENST00000261963 NDUFA9Q16795 377 aa21.1■□□□□ 0.97
MCF2L-201ENST00000261963 ENTPD8Q5MY95 495 aa21.1■□□□□ 0.97
MCF2L-201ENST00000261963 RNLSQ5VYX0 342 aa21.1■□□□□ 0.97
MCF2L-201ENST00000261963 ZNF730Q6ZMV8 503 aa21.1■□□□□ 0.97
MCF2L-201ENST00000261963 USP30Q70CQ3 517 aa21.1■□□□□ 0.97
MCF2L-201ENST00000261963 MEX3DQ86XN8 651 aaKnown RBP21.1■□□□□ 0.97
MCF2L-201ENST00000261963 KATNB1Q9BVA0 655 aa21.1■□□□□ 0.97
MCF2L-201ENST00000261963 KIR3DX1Q9H7L2 352 aa21.1■□□□□ 0.97
MCF2L-201ENST00000261963 DZANK1Q9NVP4 752 aa21.1■□□□□ 0.97
MCF2L-201ENST00000261963 SLC31A1O15431 190 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 NARSO43776 548 aaKnown RBP21.09■□□□□ 0.97
MCF2L-201ENST00000261963 ASGR2P07307 311 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 CMPK1P30085 196 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 CDK5Q00535 292 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 GNA13Q14344 377 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 CEBPEQ15744 281 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 SYT14P1Q58G82 188 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 DGLUCYQ7Z3D6 616 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 IL17RCQ8NAC3 791 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 MOAP1Q96BY2 351 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 ELP4Q96EB1 424 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 SOSTQ9BQB4 213 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 TMEM43Q9BTV4 400 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 PLA2G12AQ9BZM1 189 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 PIGUQ9H490 435 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 B3GAT2Q9NPZ5 323 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 EQTNQ9NQ60 294 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 EVA1BQ9NVM1 165 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 TBC1D29Q9UFV1 150 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 PHF11Q9UIL8 331 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 GPR55Q9Y2T6 319 aaPredicted RBP21.09■□□□□ 0.97
MCF2L-201ENST00000261963 F5P12259 2224 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 CIB4A0PJX0 185 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 EMC8O43402 210 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 ENPP1P22413 925 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 IL18Q14116 193 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 SLC25A30Q5SVS4 291 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 PRAMEF8Q5VWM4 474 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 PRAMEF7Q5VXH5 474 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 METAP1DQ6UB28 335 aaPredicted RBP21.09■□□□□ 0.97
MCF2L-201ENST00000261963 PLEKHM3Q6ZWE6 761 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 VN1R4Q7Z5H5 301 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 COMMD7Q86VX2 200 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 TIGD4Q8IY51 512 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 LINC00471Q8N535 108 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 PHF21AQ96BD5 680 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 FCRL4Q96PJ5 515 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 LIN7BQ9HAP6 207 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 ZNF224Q9NZL3 707 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 MGAT4AQ9UM21 535 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 CHST2Q9Y4C5 530 aa21.09■□□□□ 0.97
MCF2L-201ENST00000261963 A0A087WUU8 490 aa21.08■□□□□ 0.97
MCF2L-201ENST00000261963 FRS3O43559 492 aa21.08■□□□□ 0.97
MCF2L-201ENST00000261963 PPP2CBP62714 309 aa21.08■□□□□ 0.97
MCF2L-201ENST00000261963 PPP2CAP67775 309 aa21.08■□□□□ 0.97
MCF2L-201ENST00000261963 PRR5P85299 388 aa21.08■□□□□ 0.97
MCF2L-201ENST00000261963 P2RY14Q15391 338 aa21.08■□□□□ 0.97
MCF2L-201ENST00000261963 TCEA2Q15560 299 aa21.08■□□□□ 0.97
MCF2L-201ENST00000261963 LTB4RQ15722 352 aa21.08■□□□□ 0.97
MCF2L-201ENST00000261963 TMEM196Q5HYL7 178 aa21.08■□□□□ 0.97
MCF2L-201ENST00000261963 KCT2Q8NC54 265 aa21.08■□□□□ 0.97
MCF2L-201ENST00000261963 NUP43Q8NFH3 380 aa21.08■□□□□ 0.97
MCF2L-201ENST00000261963 OR4E2Q8NGC2 313 aa21.08■□□□□ 0.97
MCF2L-201ENST00000261963 CREB3L1Q96BA8 519 aa21.08■□□□□ 0.97
MCF2L-201ENST00000261963 FOLH1BQ9HBA9 442 aa21.08■□□□□ 0.97
MCF2L-201ENST00000261963 CDH10Q9Y6N8 788 aa21.08■□□□□ 0.97
MCF2L-201ENST00000261963 ISM1B1AKI9 464 aa21.08■□□□□ 0.96
MCF2L-201ENST00000261963 RAF1P04049 648 aa21.08■□□□□ 0.96
MCF2L-201ENST00000261963 TPOP07202 933 aa21.08■□□□□ 0.96
MCF2L-201ENST00000261963 CHRM5P08912 532 aaPredicted RBP21.08■□□□□ 0.96
MCF2L-201ENST00000261963 CPEP16870 476 aa21.08■□□□□ 0.96
MCF2L-201ENST00000261963 TSFMP43897 325 aaKnown RBP21.08■□□□□ 0.96
MCF2L-201ENST00000261963 POU4F3Q15319 338 aa21.08■□□□□ 0.96
MCF2L-201ENST00000261963 FLYWCH1Q4VC44 716 aa21.08■□□□□ 0.96
MCF2L-201ENST00000261963 KLHL22Q53GT1 634 aa21.08■□□□□ 0.96
MCF2L-201ENST00000261963 BICRALQ6AI39 1079 aa21.08■□□□□ 0.96
MCF2L-201ENST00000261963 VRK2Q86Y07 508 aa21.08■□□□□ 0.96
MCF2L-201ENST00000261963 SRFBP1Q8NEF9 429 aaKnown RBP21.08■□□□□ 0.96
MCF2L-201ENST00000261963 TMEM163Q8TC26 289 aa21.08■□□□□ 0.96
MCF2L-201ENST00000261963 LRR1Q96L50 414 aa21.08■□□□□ 0.96
MCF2L-201ENST00000261963 ZNF582Q96NG8 517 aaPredicted RBP21.08■□□□□ 0.96
MCF2L-201ENST00000261963 TESQ9UGI8 421 aaKnown RBP21.08■□□□□ 0.96
MCF2L-201ENST00000261963 GIMAP1-GIMAP5A0A087WTJ2 511 aa21.07■□□□□ 0.96
MCF2L-201ENST00000261963 TBC1D3DA0A087WVF3 549 aa21.07■□□□□ 0.96
MCF2L-201ENST00000261963 TBC1D3IA0A087WXS9 549 aa21.07■□□□□ 0.96
MCF2L-201ENST00000261963 TBC1D3EA0A087X179 549 aa21.07■□□□□ 0.96
MCF2L-201ENST00000261963 TBC1D3KA0A087X1G2 549 aa21.07■□□□□ 0.96
MCF2L-201ENST00000261963 PRSS38A1L453 326 aa21.07■□□□□ 0.96
MCF2L-201ENST00000261963 TBC1D3FA6NER0 549 aaPredicted RBP21.07■□□□□ 0.96
MCF2L-201ENST00000261963 TBC1D3LB9A6J9 549 aa21.07■□□□□ 0.96
MCF2L-201ENST00000261963 LINC01565O15544 149 aa21.07■□□□□ 0.96
MCF2L-201ENST00000261963 ZIC2O95409 532 aaPredicted RBP21.07■□□□□ 0.96
MCF2L-201ENST00000261963 NTN1O95631 604 aa21.07■□□□□ 0.96
MCF2L-201ENST00000261963 TBC1D3HP0C7X1 549 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms