RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 SPATA13Q96N96 652 aa4□□□□□ -1.77
TRA2B-201ENST00000259043 P2RY13Q9BPV8 354 aa4□□□□□ -1.77
TRA2B-201ENST00000259043 WWTR1Q9GZV5 400 aa4□□□□□ -1.77
TRA2B-201ENST00000259043 ATG10Q9H0Y0 220 aa4□□□□□ -1.77
TRA2B-201ENST00000259043 POLR3FQ9H1D9 316 aaPredicted RBP4□□□□□ -1.77
TRA2B-201ENST00000259043 ECT2Q9H8V3 914 aa4□□□□□ -1.77
TRA2B-201ENST00000259043 VIPAS39Q9H9C1 493 aa4□□□□□ -1.77
TRA2B-201ENST00000259043 GPN1Q9HCN4 374 aaPredicted RBP4□□□□□ -1.77
TRA2B-201ENST00000259043 RPS10P5Q9NQ39 176 aa4□□□□□ -1.77
TRA2B-201ENST00000259043 EXOC7Q9UPT5 735 aa4□□□□□ -1.77
TRA2B-201ENST00000259043 SH3GLB1Q9Y371 365 aa4□□□□□ -1.77
TRA2B-201ENST00000259043 CABIN1Q9Y6J0 2220 aa4□□□□□ -1.77
TRA2B-201ENST00000259043 C2CD3Q4AC94 2353 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 MYOFQ9NZM1 2061 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 CREBBPQ92793 2442 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 AHCTF1Q8WYP5 2266 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 MACROD2A1Z1Q3 448 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 CCDC162PA2VCL2 907 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 C15orf61A6NNL5 157 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 A8MVM7 634 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 EPM2AB3EWF7 344 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 SGK1O00141 431 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 SYT7O43581 403 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 GMNNO75496 209 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 ANPEPP15144 967 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 HMGA1P17096 107 aaKnown RBP3.99□□□□□ -1.77
TRA2B-201ENST00000259043 CYP3A5P20815 502 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 SYT1P21579 422 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 ACP1P24666 158 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 MARCKSP29966 332 aaPredicted RBP3.99□□□□□ -1.77
TRA2B-201ENST00000259043 CNN1P51911 297 aaKnown RBP3.99□□□□□ -1.77
TRA2B-201ENST00000259043 HNRNPFP52597 415 aaKnown RBP3.99□□□□□ -1.77
TRA2B-201ENST00000259043 GSCP56915 257 aaPredicted RBP3.99□□□□□ -1.77
TRA2B-201ENST00000259043 KCNK10P57789 538 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 SRP54P61011 504 aaKnown RBP3.99□□□□□ -1.77
TRA2B-201ENST00000259043 HTD2P86397 168 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 CDH18Q13634 790 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 KLHL40Q2TBA0 621 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 HLA-BQ31612 363 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 DNAJC21Q5F1R6 531 aaKnown RBP3.99□□□□□ -1.77
TRA2B-201ENST00000259043 TCTEX1D4Q5JR98 221 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 BSPRYQ5W0U4 402 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 SLC27A4Q6P1M0 643 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 DHRS11Q6UWP2 260 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 ELMOD2Q8IZ81 293 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 CMTM8Q8IZV2 173 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 STKLD1Q8NE28 680 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 TMEM185AQ8NFB2 350 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 CCDC26Q8TAB7 109 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 CCDC110Q8TBZ0 833 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 CCDC12Q8WUD4 166 aaPredicted RBP3.99□□□□□ -1.77
TRA2B-201ENST00000259043 SLCO2A1Q92959 643 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 C14orf79Q96F83 325 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 ZNF274Q96GC6 653 aaPredicted RBP3.99□□□□□ -1.77
TRA2B-201ENST00000259043 NKX3-1Q99801 234 aaPredicted RBP3.99□□□□□ -1.77
TRA2B-201ENST00000259043 HSD17B14Q9BPX1 270 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 PIGQQ9BRB3 760 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 LLPHQ9BRT6 129 aaKnown RBP3.99□□□□□ -1.77
TRA2B-201ENST00000259043 THAP2Q9H0W7 228 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 ABCG4Q9H172 646 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 CARD9Q9H257 536 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 HOMER3Q9NSC5 361 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 PIGVQ9NUD9 493 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 TAS2R3Q9NYW6 316 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 SPASTQ9UBP0 616 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 DNPEPQ9ULA0 475 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 MMP17Q9ULZ9 603 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 PPP2R2CQ9Y2T4 447 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 SELENOKQ9Y6D0 94 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 KNL1Q8NG31 2342 aa3.99□□□□□ -1.77
TRA2B-201ENST00000259043 LRRIQ4A6NIV6 560 aa3.98□□□□□ -1.77
TRA2B-201ENST00000259043 SNURFLB1AK76 121 aa3.98□□□□□ -1.77
TRA2B-201ENST00000259043 FPGTO14772 594 aa3.98□□□□□ -1.77
TRA2B-201ENST00000259043 CHUKO15111 745 aa3.98□□□□□ -1.77
TRA2B-201ENST00000259043 CYTIPO60759 359 aa3.98□□□□□ -1.77
TRA2B-201ENST00000259043 PFKFB2O60825 505 aa3.98□□□□□ -1.77
TRA2B-201ENST00000259043 NXPH2O95156 264 aa3.98□□□□□ -1.77
TRA2B-201ENST00000259043 OR6A2O95222 327 aa3.98□□□□□ -1.77
TRA2B-201ENST00000259043 MBD3O95983 291 aa3.98□□□□□ -1.77
TRA2B-201ENST00000259043 SLC2A2P11168 524 aaPredicted RBP3.98□□□□□ -1.77
TRA2B-201ENST00000259043 KCNE1P15382 129 aa3.98□□□□□ -1.77
TRA2B-201ENST00000259043 UGT1A4P22310 534 aa3.98□□□□□ -1.77
TRA2B-201ENST00000259043 CTNNA2P26232 953 aa3.98□□□□□ -1.77
TRA2B-201ENST00000259043 SHC1P29353 583 aa3.98□□□□□ -1.77
TRA2B-201ENST00000259043 NMT1P30419 496 aaKnown RBP3.98□□□□□ -1.77
TRA2B-201ENST00000259043 HPDP32754 393 aaPredicted RBP3.98□□□□□ -1.77
TRA2B-201ENST00000259043 RABIFP47224 123 aa3.98□□□□□ -1.77
TRA2B-201ENST00000259043 CLDN6P56747 220 aa3.98□□□□□ -1.77
TRA2B-201ENST00000259043 DCDC1P59894 354 aa3.98□□□□□ -1.77
TRA2B-201ENST00000259043 CCZ1BP86790 482 aa3.98□□□□□ -1.77
TRA2B-201ENST00000259043 CCZ1P86791 482 aaPredicted RBP3.98□□□□□ -1.77
TRA2B-201ENST00000259043 CEACAM7Q14002 265 aa3.98□□□□□ -1.77
TRA2B-201ENST00000259043 KRT31Q15323 416 aa3.98□□□□□ -1.77
TRA2B-201ENST00000259043 ZNF77Q15935 545 aa3.98□□□□□ -1.77
TRA2B-201ENST00000259043 ZNF239Q16600 458 aaKnown RBP3.98□□□□□ -1.77
TRA2B-201ENST00000259043 STX1AQ16623 288 aa3.98□□□□□ -1.77
TRA2B-201ENST00000259043 C2CD6Q53TS8 623 aa3.98□□□□□ -1.77
TRA2B-201ENST00000259043 TEX35Q5T0J7 233 aa3.98□□□□□ -1.77
TRA2B-201ENST00000259043 TMEM207Q6UWW9 146 aa3.98□□□□□ -1.77
TRA2B-201ENST00000259043 CYP4V2Q6ZWL3 525 aaPredicted RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms