RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 DOK2O60496 412 aa17.6■□□□□ 0.41
SMARCC1-201ENST00000254480 C3orf38Q5JPI3 329 aa17.6■□□□□ 0.41
SMARCC1-201ENST00000254480 TEX19Q8NA77 164 aa17.6■□□□□ 0.41
SMARCC1-201ENST00000254480 ZIC5Q96T25 663 aa17.6■□□□□ 0.41
SMARCC1-201ENST00000254480 CACNG6Q9BXT2 260 aa17.6■□□□□ 0.41
SMARCC1-201ENST00000254480 DRGXA6NNA5 263 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 H0YJX3 145 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 IFNA5P01569 189 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 EN2P19622 333 aaPredicted RBP17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 EPHA4P54764 986 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 ACY1Q03154 408 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 P2RY14Q15391 338 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 TMEM205Q6UW68 189 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 LCTLQ6UWM7 567 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 HTR3DQ70Z44 454 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 OR5W2Q8NH69 310 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 BTNL2Q9UIR0 455 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 BORCS7-ASMTA0A0B4J1R7 106 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 GPX3P22352 226 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 COMTD1Q86VU5 262 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 TSPYL5Q86VY4 417 aaPredicted RBP17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 SLC15A4Q8N697 577 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 OR5H2Q8NGV7 314 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 USP22Q9UPT9 525 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 C1orf105O95561 183 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 PET100P0DJ07 73 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 BMP4P12644 408 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 AHRP35869 848 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 CXCL12P48061 93 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 NR0B2Q15466 257 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 PCGF3Q3KNV8 242 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 NAV1Q8NEY1 1877 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 AQP2P41181 271 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 SYPL1Q16563 259 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 ZNF181Q2M3W8 571 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 HAGHLQ6PII5 290 aaPredicted RBP17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 SLC22A12Q96S37 553 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 QRSL1Q9H0R6 528 aaKnown RBP17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 PCDHA9Q9Y5H5 950 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 H3BNC9 293 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 ADAMTS4O75173 837 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 APEHP13798 732 aaKnown RBP17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 NKAIN2Q5VXU1 208 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 TRNP1Q6NT89 227 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 OR51E2Q9H255 320 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 PISDQ9UG56 409 aa17.59■□□□□ 0.41
SMARCC1-201ENST00000254480 G3V3Y1 287 aa17.58■□□□□ 0.41
SMARCC1-201ENST00000254480 GABRR1P24046 479 aa17.58■□□□□ 0.41
SMARCC1-201ENST00000254480 HOXD9P28356 352 aaPredicted RBP17.58■□□□□ 0.41
SMARCC1-201ENST00000254480 DDX31Q9H8H2 851 aaKnown RBP17.58■□□□□ 0.41
SMARCC1-201ENST00000254480 EMCNQ9ULC0 261 aa17.58■□□□□ 0.41
SMARCC1-201ENST00000254480 WDPCPO95876 746 aa17.58■□□□□ 0.41
SMARCC1-201ENST00000254480 MYF6P23409 242 aa17.58■□□□□ 0.41
SMARCC1-201ENST00000254480 CDK5R2Q13319 367 aa17.58■□□□□ 0.41
SMARCC1-201ENST00000254480 PLGLAQ15195 96 aa17.58■□□□□ 0.41
SMARCC1-201ENST00000254480 RHEBQ15382 184 aa17.58■□□□□ 0.41
SMARCC1-201ENST00000254480 IL20RBQ6UXL0 311 aa17.58■□□□□ 0.41
SMARCC1-201ENST00000254480 MAFIPQ8WZ33 124 aa17.58■□□□□ 0.41
SMARCC1-201ENST00000254480 LRRC46Q96FV0 321 aa17.58■□□□□ 0.41
SMARCC1-201ENST00000254480 RANBP3Q9H6Z4 567 aaPredicted RBP17.58■□□□□ 0.41
SMARCC1-201ENST00000254480 SACM1LQ9NTJ5 587 aa17.58■□□□□ 0.41
SMARCC1-201ENST00000254480 TMPRSS11EQ9UL52 423 aa17.58■□□□□ 0.41
SMARCC1-201ENST00000254480 CARD8Q9Y2G2 431 aa17.58■□□□□ 0.41
SMARCC1-201ENST00000254480 KLHL33A6NCF5 533 aa17.58■□□□□ 0.4
SMARCC1-201ENST00000254480 CSNK1EP49674 416 aaKnown RBP17.58■□□□□ 0.4
SMARCC1-201ENST00000254480 TANGO2Q6ICL3 276 aa17.58■□□□□ 0.4
SMARCC1-201ENST00000254480 KIF18BQ86Y91 864 aa17.58■□□□□ 0.4
SMARCC1-201ENST00000254480 GPR150Q8NGU9 434 aa17.58■□□□□ 0.4
SMARCC1-201ENST00000254480 MMP28Q9H239 520 aa17.58■□□□□ 0.4
SMARCC1-201ENST00000254480 PPIL3Q9H2H8 161 aaKnown RBP17.58■□□□□ 0.4
SMARCC1-201ENST00000254480 FBRSQ9HAH7 460 aa17.58■□□□□ 0.4
SMARCC1-201ENST00000254480 PLEK2Q9NYT0 353 aa17.58■□□□□ 0.4
SMARCC1-201ENST00000254480 KCNIP1Q9NZI2 227 aa17.58■□□□□ 0.4
SMARCC1-201ENST00000254480 LSM5Q9Y4Y9 91 aaKnown RBP17.58■□□□□ 0.4
SMARCC1-201ENST00000254480 FTCDNL1E5RQL4 147 aa17.58■□□□□ 0.4
SMARCC1-201ENST00000254480 CD34P28906 385 aa17.58■□□□□ 0.4
SMARCC1-201ENST00000254480 NKX3-2P78367 333 aa17.58■□□□□ 0.4
SMARCC1-201ENST00000254480 TAP2Q03519 686 aa17.58■□□□□ 0.4
SMARCC1-201ENST00000254480 TMEM246Q9BRR3 403 aa17.58■□□□□ 0.4
SMARCC1-201ENST00000254480 PRKRAO75569 313 aaKnown RBP17.58■□□□□ 0.4
SMARCC1-201ENST00000254480 DBHP09172 617 aa17.58■□□□□ 0.4
SMARCC1-201ENST00000254480 GDE1Q9NZC3 331 aa17.58■□□□□ 0.4
SMARCC1-201ENST00000254480 UBQLN2Q9UHD9 624 aa17.58■□□□□ 0.4
SMARCC1-201ENST00000254480 KDM4EB2RXH2 506 aaPredicted RBP17.57■□□□□ 0.4
SMARCC1-201ENST00000254480 CREBL2O60519 120 aaPredicted RBP17.57■□□□□ 0.4
SMARCC1-201ENST00000254480 CXCR4P61073 352 aa17.57■□□□□ 0.4
SMARCC1-201ENST00000254480 SERTAD2Q14140 314 aa17.57■□□□□ 0.4
SMARCC1-201ENST00000254480 HOXD1Q9GZZ0 328 aa17.57■□□□□ 0.4
SMARCC1-201ENST00000254480 CCDC88AQ3V6T2 1871 aa17.57■□□□□ 0.4
SMARCC1-201ENST00000254480 NPC1O15118 1278 aa17.57■□□□□ 0.4
SMARCC1-201ENST00000254480 SELPLGQ14242 412 aa17.57■□□□□ 0.4
SMARCC1-201ENST00000254480 LRRC18Q8N456 261 aa17.57■□□□□ 0.4
SMARCC1-201ENST00000254480 ADAMTS18Q8TE60 1221 aa17.57■□□□□ 0.4
SMARCC1-201ENST00000254480 TXLNGYQ9BZA5 131 aa17.57■□□□□ 0.4
SMARCC1-201ENST00000254480 TREX1Q9NSU2 369 aa17.57■□□□□ 0.4
SMARCC1-201ENST00000254480 TAAR2Q9P1P5 351 aa17.57■□□□□ 0.4
SMARCC1-201ENST00000254480 MSL3P1P0C860 447 aa17.57■□□□□ 0.4
SMARCC1-201ENST00000254480 B3GNT7Q8NFL0 401 aa17.57■□□□□ 0.4
SMARCC1-201ENST00000254480 LKAAEAR1Q8TD35 194 aa17.57■□□□□ 0.4
SMARCC1-201ENST00000254480 INSM2Q96T92 566 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms