RNA–Protein interactions for RNA: ENST00000246672.3

NR1D1-201, Transcript of nuclear receptor subfamily 1 group D member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1D1, Length 2,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1-201ENST00000246672 PDHA2P29803 388 aa11.66□□□□□ -0.54
NR1D1-201ENST00000246672 TBPL1P62380 186 aa11.66□□□□□ -0.54
NR1D1-201ENST00000246672 MELKQ14680 651 aa11.66□□□□□ -0.54
NR1D1-201ENST00000246672 PABPC1L2AQ5JQF8 200 aa11.66□□□□□ -0.54
NR1D1-201ENST00000246672 SLC22A10Q63ZE4 541 aa11.66□□□□□ -0.54
NR1D1-201ENST00000246672 MRGPREQ86SM8 312 aa11.66□□□□□ -0.54
NR1D1-201ENST00000246672 ASPGQ86U10 573 aa11.66□□□□□ -0.54
NR1D1-201ENST00000246672 SLITRK4Q8IW52 837 aa11.66□□□□□ -0.54
NR1D1-201ENST00000246672 LRRC56Q8IYG6 542 aaPredicted RBP11.66□□□□□ -0.54
NR1D1-201ENST00000246672 IZUMO1Q8IYV9 350 aa11.66□□□□□ -0.54
NR1D1-201ENST00000246672 ESRP2Q9H6T0 727 aaKnown RBP11.66□□□□□ -0.54
NR1D1-201ENST00000246672 CNIH4Q9P003 139 aa11.66□□□□□ -0.54
NR1D1-201ENST00000246672 MARK1Q9P0L2 795 aa11.66□□□□□ -0.54
NR1D1-201ENST00000246672 PRAMEF27A3QJZ7 478 aa11.66□□□□□ -0.54
NR1D1-201ENST00000246672 PRSS44E7EML9 344 aa11.66□□□□□ -0.54
NR1D1-201ENST00000246672 F8W036 122 aa11.66□□□□□ -0.54
NR1D1-201ENST00000246672 ARPC5O15511 151 aa11.66□□□□□ -0.54
NR1D1-201ENST00000246672 SIGLEC6O43699 453 aa11.66□□□□□ -0.54
NR1D1-201ENST00000246672 SDC3O75056 442 aa11.66□□□□□ -0.54
NR1D1-201ENST00000246672 IGHA1P01876 353 aa11.66□□□□□ -0.54
NR1D1-201ENST00000246672 NPPBP16860 134 aa11.66□□□□□ -0.54
NR1D1-201ENST00000246672 PBLDP30039 288 aaPredicted RBP11.66□□□□□ -0.54
NR1D1-201ENST00000246672 S100A11P31949 105 aa11.66□□□□□ -0.54
NR1D1-201ENST00000246672 RAD52P43351 418 aa11.66□□□□□ -0.54
NR1D1-201ENST00000246672 SLC11A1P49279 550 aa11.66□□□□□ -0.54
NR1D1-201ENST00000246672 MANFP55145 182 aaKnown RBP11.66□□□□□ -0.54
NR1D1-201ENST00000246672 POLR2GP62487 172 aaKnown RBP eCLIP11.66□□□□□ -0.54
NR1D1-201ENST00000246672 SHC2P98077 582 aa11.66□□□□□ -0.54
NR1D1-201ENST00000246672 TRMT11Q7Z4G4 463 aaKnown RBP11.66□□□□□ -0.54
NR1D1-201ENST00000246672 C6orf120Q7Z4R8 191 aa11.66□□□□□ -0.54
NR1D1-201ENST00000246672 METTL3Q86U44 580 aaKnown RBP11.66□□□□□ -0.54
NR1D1-201ENST00000246672 LSRQ86X29 649 aaPredicted RBP11.66□□□□□ -0.54
NR1D1-201ENST00000246672 PM20D2Q8IYS1 436 aa11.66□□□□□ -0.54
NR1D1-201ENST00000246672 CPXM2Q8N436 756 aa11.66□□□□□ -0.54
NR1D1-201ENST00000246672 SIRT6Q8N6T7 355 aa11.66□□□□□ -0.54
NR1D1-201ENST00000246672 OR6T1Q8NGN1 323 aa11.66□□□□□ -0.54
NR1D1-201ENST00000246672 ZDHHC1Q8WTX9 485 aa11.66□□□□□ -0.54
NR1D1-201ENST00000246672 ZNF480Q8WV37 535 aa11.66□□□□□ -0.54
NR1D1-201ENST00000246672 TMEM159Q96B96 161 aa11.66□□□□□ -0.54
NR1D1-201ENST00000246672 FCRL4Q96PJ5 515 aa11.66□□□□□ -0.54
NR1D1-201ENST00000246672 TREX2Q9BQ50 279 aaPredicted RBP11.66□□□□□ -0.54
NR1D1-201ENST00000246672 ORAI3Q9BRQ5 295 aa11.66□□□□□ -0.54
NR1D1-201ENST00000246672 SUV39H2Q9H5I1 410 aa11.66□□□□□ -0.54
NR1D1-201ENST00000246672 LRRN3E7EW58 273 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 PRR23D1E9PI22 279 aaPredicted RBP11.65□□□□□ -0.54
NR1D1-201ENST00000246672 FOXE1O00358 373 aaPredicted RBP11.65□□□□□ -0.54
NR1D1-201ENST00000246672 GALR3O60755 368 aaPredicted RBP11.65□□□□□ -0.54
NR1D1-201ENST00000246672 RP2O75695 350 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 PRR23D2P0DMB1 279 aaPredicted RBP11.65□□□□□ -0.54
NR1D1-201ENST00000246672 SNRPBP14678 240 aaKnown RBP11.65□□□□□ -0.54
NR1D1-201ENST00000246672 GABRA1P14867 456 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 RNF144AP50876 292 aaPredicted RBP11.65□□□□□ -0.54
NR1D1-201ENST00000246672 CTSCP53634 463 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 ARL9Q6T311 187 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 NHLRC1Q6VVB1 395 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 PDZD9Q8IXQ8 264 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 OR51G2Q8NGK0 314 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 HAVCR2Q8TDQ0 301 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 HMGB4Q8WW32 186 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 RFKQ969G6 155 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 ECHDC3Q96DC8 303 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 LCORQ96JN0 433 aaPredicted RBP11.65□□□□□ -0.54
NR1D1-201ENST00000246672 ZNF607Q96SK3 696 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 TBX5Q99593 518 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 LRRN3Q9H3W5 708 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 ZDHHC6Q9H6R6 413 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 KCNK12Q9HB15 430 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 PRKAG2Q9UGJ0 569 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 CYB5R1Q9UHQ9 305 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 A0A087WUU8 490 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 SOCS6O14544 535 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 ARPC1BO15143 372 aaKnown RBP11.65□□□□□ -0.54
NR1D1-201ENST00000246672 SLC2A10O95528 541 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 CALCRP30988 508 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 CD70P32970 193 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 TRIM23P36406 574 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 GDNFP39905 211 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 CCR8P51685 355 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 SCRN3Q0VDG4 424 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 LMAN2Q12907 356 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 B3GNTL1Q67FW5 361 aaPredicted RBP11.65□□□□□ -0.54
NR1D1-201ENST00000246672 SLC25A25Q6KCM7 469 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 TMUB2Q71RG4 321 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 SZRD1Q7Z422 152 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 CEACAM19Q7Z692 300 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 SYT9Q86SS6 491 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 TBC1D19Q8N5T2 526 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 EIF4E3Q8N5X7 224 aaKnown RBP11.65□□□□□ -0.54
NR1D1-201ENST00000246672 OR5D16Q8NGK9 328 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 OR4Q3Q8NH05 313 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 C7orf50Q9BRJ6 194 aaKnown RBP11.65□□□□□ -0.54
NR1D1-201ENST00000246672 ARL6Q9H0F7 186 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 TDP1Q9NUW8 608 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 BABAM2Q9NXR7 383 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 COA4Q9NYJ1 87 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 ACTR10Q9NZ32 417 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 EMC3Q9P0I2 261 aa11.65□□□□□ -0.54
NR1D1-201ENST00000246672 PURGQ9UJV8 347 aaKnown RBP11.65□□□□□ -0.54
NR1D1-201ENST00000246672 EXOGQ9Y2C4 368 aaKnown RBP11.65□□□□□ -0.54
NR1D1-201ENST00000246672 MPTX1A8MV57 137 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms