RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 FAM198BQ6UWH4 519 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 ADIPOR2Q86V24 386 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 RELL2Q8NC24 303 aaPredicted RBP13.18□□□□□ -0.3
SF1-201ENST00000227503 OR5D16Q8NGK9 328 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 GANCQ8TET4 914 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 FGF11Q92914 225 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 ZNF689Q96CS4 500 aaPredicted RBP13.18□□□□□ -0.3
SF1-201ENST00000227503 VWCEQ96DN2 955 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 GSDMCQ9BYG8 508 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 QRSL1Q9H0R6 528 aaKnown RBP13.18□□□□□ -0.3
SF1-201ENST00000227503 PHF11Q9UIL8 331 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 A4GNTQ9UNA3 340 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 CSNK1G3Q9Y6M4 447 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 ARRDC5A6NEK1 342 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 DNASE2O00115 360 aaPredicted RBP13.18□□□□□ -0.3
SF1-201ENST00000227503 SOCS6O14544 535 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 IL3P08700 152 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 PRLHRP49683 370 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 GPR85P60893 370 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 ZNF763Q0D2J5 394 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 SYPL1Q16563 259 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 RNLSQ5VYX0 342 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 ARL9Q6T311 187 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 OAFQ86UD1 273 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 LRRC28Q86X40 367 aaPredicted RBP13.18□□□□□ -0.3
SF1-201ENST00000227503 ANKRD53Q8N9V6 530 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 FBXO15Q8NCQ5 510 aaPredicted RBP13.18□□□□□ -0.3
SF1-201ENST00000227503 OR51Q1Q8NH59 317 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 SLC6A17Q9H1V8 727 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 FANCFQ9NPI8 374 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 SPG21Q9NZD8 308 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 NFKBIL1Q9UBC1 381 aaPredicted RBP13.18□□□□□ -0.3
SF1-201ENST00000227503 MGAT4CQ9UBM8 478 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 SEC14L3Q9UDX4 400 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 ACSL5Q9ULC5 683 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 NEDD8-MDP1E9PL57 170 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 ARPC5O15511 151 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 GPR37L1O60883 481 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 LEFTY1O75610 366 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 HOXB3P14651 431 aaPredicted RBP13.18□□□□□ -0.3
SF1-201ENST00000227503 STXBP1P61764 594 aaKnown RBP13.18□□□□□ -0.3
SF1-201ENST00000227503 PDE7AQ13946 482 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 TMEM215Q68D42 235 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 SLC36A4Q6YBV0 504 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 ZNF740Q8NDX6 193 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 OR51G2Q8NGK0 314 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 RPLP0P6Q8NHW5 317 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 ZNF768Q9H5H4 540 aaKnown RBP13.18□□□□□ -0.3
SF1-201ENST00000227503 DDX31Q9H8H2 851 aaKnown RBP13.18□□□□□ -0.3
SF1-201ENST00000227503 KIF25Q9UIL4 384 aa13.18□□□□□ -0.3
SF1-201ENST00000227503 E9PI62 339 aa13.17□□□□□ -0.3
SF1-201ENST00000227503 RTCAO00442 366 aaKnown RBP13.17□□□□□ -0.3
SF1-201ENST00000227503 MID1O15344 667 aa13.17□□□□□ -0.3
SF1-201ENST00000227503 PIP5K1CO60331 668 aa13.17□□□□□ -0.3
SF1-201ENST00000227503 B4GALT2O60909 372 aa13.17□□□□□ -0.3
SF1-201ENST00000227503 PTP4A3O75365 173 aa13.17□□□□□ -0.3
SF1-201ENST00000227503 GLAP06280 429 aa13.17□□□□□ -0.3
SF1-201ENST00000227503 PTHLHP12272 177 aa13.17□□□□□ -0.3
SF1-201ENST00000227503 SLC3A1Q07837 685 aa13.17□□□□□ -0.3
SF1-201ENST00000227503 FZD5Q13467 585 aa13.17□□□□□ -0.3
SF1-201ENST00000227503 ARSIQ5FYB1 569 aa13.17□□□□□ -0.3
SF1-201ENST00000227503 SLC25A25Q6KCM7 469 aa13.17□□□□□ -0.3
SF1-201ENST00000227503 RPTNQ6XPR3 784 aa13.17□□□□□ -0.3
SF1-201ENST00000227503 C2orf73Q8N5S3 287 aaPredicted RBP13.17□□□□□ -0.3
SF1-201ENST00000227503 SIRT6Q8N6T7 355 aa13.17□□□□□ -0.3
SF1-201ENST00000227503 C16orf78Q8WTQ4 265 aa13.17□□□□□ -0.3
SF1-201ENST00000227503 ZNF480Q8WV37 535 aa13.17□□□□□ -0.3
SF1-201ENST00000227503 GLYATL1Q969I3 302 aa13.17□□□□□ -0.3
SF1-201ENST00000227503 C20orf85Q9H1P6 137 aa13.17□□□□□ -0.3
SF1-201ENST00000227503 MED20Q9H944 212 aa13.17□□□□□ -0.3
SF1-201ENST00000227503 FGF20Q9NP95 211 aaPredicted RBP13.17□□□□□ -0.3
SF1-201ENST00000227503 MAN2C1Q9NTJ4 1040 aa13.17□□□□□ -0.3
SF1-201ENST00000227503 LIPT1Q9Y234 373 aa13.17□□□□□ -0.3
SF1-201ENST00000227503 STON1Q9Y6Q2 735 aa13.17□□□□□ -0.3
SF1-201ENST00000227503 A0A1B0GVI7 797 aa13.17□□□□□ -0.3
SF1-201ENST00000227503 NPPBP16860 134 aa13.17□□□□□ -0.3
SF1-201ENST00000227503 UBE2MP61081 183 aaKnown RBP13.17□□□□□ -0.3
SF1-201ENST00000227503 TMEM115Q12893 351 aaPredicted RBP13.17□□□□□ -0.3
SF1-201ENST00000227503 ZNF658BQ4V348 819 aaPredicted RBP13.17□□□□□ -0.3
SF1-201ENST00000227503 HSD17B12Q53GQ0 312 aa13.17□□□□□ -0.3
SF1-201ENST00000227503 SFXN4Q6P4A7 337 aa13.17□□□□□ -0.3
SF1-201ENST00000227503 OVCH2Q7RTZ1 564 aa13.17□□□□□ -0.3
SF1-201ENST00000227503 OR6T1Q8NGN1 323 aa13.17□□□□□ -0.3
SF1-201ENST00000227503 FAM46AQ96IP4 442 aaKnown RBP13.17□□□□□ -0.3
SF1-201ENST00000227503 YIPF4Q9BSR8 244 aa13.17□□□□□ -0.3
SF1-201ENST00000227503 FNDC11Q9BVV2 318 aa13.17□□□□□ -0.3
SF1-201ENST00000227503 IFT22Q9H7X7 185 aa13.17□□□□□ -0.3
SF1-201ENST00000227503 LHX6Q9UPM6 363 aa13.17□□□□□ -0.3
SF1-201ENST00000227503 PRELID3BQ9Y3B1 194 aa13.17□□□□□ -0.3
SF1-201ENST00000227503 UNC80Q8N2C7 3258 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 TSPAN11A1L157 253 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 A8MXK9 166 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 CASC3O15234 703 aaKnown RBP13.16□□□□□ -0.3
SF1-201ENST00000227503 C1orf105O95561 183 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 LRG1P02750 347 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 CTSLP07711 333 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 ADRB1P08588 477 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 ACP5P13686 325 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 F8A1P23610 371 aa13.16□□□□□ -0.3
SF1-201ENST00000227503 MMP12P39900 470 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms