RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 LRRC25Q8N386 305 aaPredicted RBP12.4□□□□□ -0.42
SRP54-201ENST00000216774 SLC16A11Q8NCK7 471 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 OR51G2Q8NGK0 314 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 OR5M3Q8NGP4 307 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 GAL3ST3Q96A11 431 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 ASB16Q96NS5 453 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 FCRL4Q96PJ5 515 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 GTPBP2Q9BX10 602 aaKnown RBP12.4□□□□□ -0.42
SRP54-201ENST00000216774 INPP5EQ9NRR6 644 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 CYSLTR2Q9NS75 346 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 WDR70Q9NW82 654 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 WDR45Q9Y484 360 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 NUMA1Q14980 2115 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 MYO10Q9HD67 2058 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 UNC119BA6NIH7 251 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 CEACAM5P06731 702 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 BTN3A2P78410 334 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 DUSP8Q13202 625 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 CST6Q15828 149 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 ARHGAP11BQ3KRB8 267 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 BICRALQ6AI39 1079 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 FAM111BQ6SJ93 734 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 ZNF836Q6ZNA1 936 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 MEPCEQ7L2J0 689 aaKnown RBP12.4□□□□□ -0.42
SRP54-201ENST00000216774 ADGRD2Q7Z7M1 963 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 RANBP3LQ86VV4 465 aaPredicted RBP12.4□□□□□ -0.42
SRP54-201ENST00000216774 RNF113BQ8IZP6 322 aaKnown RBP12.4□□□□□ -0.42
SRP54-201ENST00000216774 OR7G2Q8NG99 324 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 OR52L1Q8NGH7 329 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 CDS1Q92903 461 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 SMARCD2Q92925 531 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 C10orf90Q96M02 699 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 ALG8Q9BVK2 526 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 SYNPO2LQ9H987 977 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 ISG20L2Q9H9L3 353 aaKnown RBP12.4□□□□□ -0.42
SRP54-201ENST00000216774 ZDHHC4Q9NPG8 344 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 TRIM36Q9NQ86 728 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 TRPV5Q9NQA5 729 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 SPHK1Q9NYA1 384 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 PCDH10Q9P2E7 1040 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 EXTL2Q9UBQ6 330 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 IL20RAQ9UHF4 553 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 SLC17A4Q9Y2C5 497 aa12.4□□□□□ -0.42
SRP54-201ENST00000216774 TRAPPC13A5PLN9 417 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 C12orf71A8MTZ7 269 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 ZNF780AO75290 641 aaPredicted RBP12.39□□□□□ -0.43
SRP54-201ENST00000216774 ZGLP1P0C6A0 271 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 TALDO1P37837 337 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 ZNF136P52737 540 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 ATP12AP54707 1039 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 BTG1P62324 171 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 EEF1A1P68104 462 aaKnown RBP12.39□□□□□ -0.43
SRP54-201ENST00000216774 SHC2P98077 582 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 CSTF1Q05048 431 aaKnown RBP12.39□□□□□ -0.43
SRP54-201ENST00000216774 MAB21L1Q13394 359 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 CAMK1Q14012 370 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 TRAM1Q15629 374 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 RPE65Q16518 533 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 TJAP1Q5JTD0 557 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 ZNF57Q68EA5 555 aaPredicted RBP12.39□□□□□ -0.43
SRP54-201ENST00000216774 PLBD1Q6P4A8 553 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 MTSS1LQ765P7 747 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 ABI3BPQ7Z7G0 1075 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 NR2C2APQ86WQ0 139 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 OR2L13Q8N349 312 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 FANK1Q8TC84 345 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 AHCYL2Q96HN2 611 aaKnown RBP12.39□□□□□ -0.43
SRP54-201ENST00000216774 RSPH9Q9H1X1 276 aaPredicted RBP12.39□□□□□ -0.43
SRP54-201ENST00000216774 OR52D1Q9H346 318 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 KIR3DX1Q9H7L2 352 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 FOLH1BQ9HBA9 442 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 HEBP2Q9Y5Z4 205 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 TRPM6Q9BX84 2022 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 A0A0G2JMP0 313 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 A0A0X1KG70 313 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 FAM183AA6NL82 134 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 INMT-MINDY4F8WBC2 141 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 BHLHE40O14503 412 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 PAK4O96013 591 aaPredicted RBP12.39□□□□□ -0.43
SRP54-201ENST00000216774 RBMS1P29558 406 aaKnown RBP12.39□□□□□ -0.43
SRP54-201ENST00000216774 SLC6A1P30531 599 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 RFX3P48380 749 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 FGL2Q14314 439 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 GALEQ14376 348 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 IDNKQ5T6J7 187 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 PRPF38BQ5VTL8 546 aaKnown RBP12.39□□□□□ -0.43
SRP54-201ENST00000216774 RPL13AP3Q6NVV1 102 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 GET4Q7L5D6 327 aaPredicted RBP12.39□□□□□ -0.43
SRP54-201ENST00000216774 TPRA1Q86W33 373 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 LNX2Q8N448 690 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 HDDC3Q8N4P3 179 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 OR7G1Q8NGA0 311 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 OR4M2Q8NGB6 313 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 C17orf50Q8WW18 174 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 AKAP1Q92667 903 aaKnown RBP eCLIP12.39□□□□□ -0.43
SRP54-201ENST00000216774 TIMP4Q99727 224 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 C6orf106Q9H6K1 298 aaPredicted RBP12.39□□□□□ -0.43
SRP54-201ENST00000216774 MCUBQ9NWR8 336 aa12.39□□□□□ -0.43
SRP54-201ENST00000216774 ZNF223Q9UK11 482 aaPredicted RBP12.39□□□□□ -0.43
SRP54-201ENST00000216774 LOC102723532A0A0G2JNH3 316 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms