RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 ASB4Q9Y574 426 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 CIB4A0PJX0 185 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 SLC19A2O60779 497 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 TRIM3O75382 744 aaPredicted RBP13.09□□□□□ -0.31
USH1C-201ENST00000005226 PRNPP04156 253 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 PRG2P13727 222 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 THBS2P35442 1172 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 ATP12AP54707 1039 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 POU4F3Q15319 338 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 MLF2Q15773 248 aaPredicted RBP13.09□□□□□ -0.31
USH1C-201ENST00000005226 PLPP4Q5VZY2 271 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 ZNF767PQ75MW2 155 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 CEACAM19Q7Z692 300 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 CCDC28AQ8IWP9 274 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 OR4N5Q8IXE1 308 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 OR5M3Q8NGP4 307 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 ACOT11Q8WXI4 607 aaPredicted RBP13.09□□□□□ -0.31
USH1C-201ENST00000005226 CHFRQ96EP1 664 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 CCDC120Q96HB5 630 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 LRIG1Q96JA1 1093 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 HYLS1Q96M11 299 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 C12orf66Q96MD2 445 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 INSM2Q96T92 566 aaPredicted RBP13.09□□□□□ -0.31
USH1C-201ENST00000005226 ASB6Q9NWX5 421 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 FBXL4Q9UKA2 621 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 KCNK6Q9Y257 313 aa13.09□□□□□ -0.31
USH1C-201ENST00000005226 IGLON5A6NGN9 336 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 OTOL1A6NHN0 477 aaPredicted RBP13.08□□□□□ -0.32
USH1C-201ENST00000005226 OR52A4PA6NMU1 304 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 CASC3O15234 703 aaKnown RBP13.08□□□□□ -0.32
USH1C-201ENST00000005226 CHST10O43529 356 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 SNRNP200O75643 2136 aaKnown RBP13.08□□□□□ -0.32
USH1C-201ENST00000005226 GKN3PP0CG01 181 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 DRD2P14416 443 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 AHCYP23526 432 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 VIPR2P41587 438 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 HCCSP53701 268 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 RPS7P62081 194 aaKnown RBP13.08□□□□□ -0.32
USH1C-201ENST00000005226 MLC1Q15049 377 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 CNKSR3Q6P9H4 555 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 LYPD4Q6UWN0 246 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 C17orf47Q8NEP4 570 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 OR2A1Q8NGT9 310 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 OR52N1Q8NH53 320 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 FAIM2Q9BWQ8 316 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 CCDC86Q9H6F5 360 aaKnown RBP13.08□□□□□ -0.32
USH1C-201ENST00000005226 ZFP64Q9NPA5 681 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 PRDM7Q9NQW5 492 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 C20orf141Q9NUB4 165 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 ADAM30Q9UKF2 790 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 CACNG2Q9Y698 323 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 DAPL1A0PJW8 107 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 SLC9B1P1A6NJY1 282 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 VEGFDO43915 354 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 RFPL3O75679 317 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 GYPBP06028 91 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 ERGP11308 486 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 HIST1H1TP22492 207 aaPredicted RBP13.08□□□□□ -0.32
USH1C-201ENST00000005226 GIFP27352 417 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 TALDO1P37837 337 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 STAT5AP42229 794 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 RIN1Q13671 783 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 ESCO2Q56NI9 601 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 WDR45BQ5MNZ6 344 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 METRNLQ641Q3 311 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 GRASPQ7Z6J2 395 aaPredicted RBP13.08□□□□□ -0.32
USH1C-201ENST00000005226 IZUMO1Q8IYV9 350 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 ACBD7Q8N6N7 88 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 LRRC17Q8N6Y2 441 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 OR2T33Q8NG76 320 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 OR4D9Q8NGE8 314 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 PFN4Q8NHR9 129 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 MS4A6EQ96DS6 147 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 CAMK1GQ96NX5 476 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 ORAI3Q9BRQ5 295 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 MRPL15Q9P015 296 aaKnown RBP13.08□□□□□ -0.32
USH1C-201ENST00000005226 POLHQ9Y253 713 aa13.08□□□□□ -0.32
USH1C-201ENST00000005226 NPIPA5A0A0B4J1W7 369 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 NPIPA7E9PJI5 369 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 J3QLW9 94 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 BTN3A3O00478 584 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 ADH1AP07327 375 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 SLC35G4P0C7Q5 338 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 NPIPA8P0DM63 369 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 ZNF250P15622 560 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 ZNF19P17023 458 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 NDUFV2P19404 249 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 FPR3P25089 353 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 PITPNBP48739 271 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 FXYD6P3P58550 94 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 TOR2AQ5JU69 321 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 FAM111BQ6SJ93 734 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 PRSS45Q7RTY3 260 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 CYB561A3Q8NBI2 242 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 OR5W2Q8NH69 310 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 TRMT10AQ8TBZ6 339 aaKnown RBP13.07□□□□□ -0.32
USH1C-201ENST00000005226 CDS1Q92903 461 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 ELP4Q96EB1 424 aa13.07□□□□□ -0.32
USH1C-201ENST00000005226 DPCDQ9BVM2 203 aaPredicted RBP13.07□□□□□ -0.32
USH1C-201ENST00000005226 EVA1BQ9NVM1 165 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms