RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Tas2r3Q7TQA7 316 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Olfml2aQ8BHP7 681 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Yipf4Q8C407 246 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Teddm1bQ8CC62 306 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Serpina11Q8CIE0 424 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Tmem268Q8R239 342 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Olfr1284Q8VF29 311 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Olfr700Q8VFM5 316 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Olfr1Q8VGI1 314 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 DlstQ9D2G2 454 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Fam166aQ9D4K5 319 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 PrknQ9WVS6 464 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 Sema4fQ9Z123 777 aa15.42■□□□□ 0.06
Shh-201ENSMUST00000002708 CtcflA2APF3 636 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Mgl2A9XX86 381 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Gm8973D3YX71 104 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Gm3594E9Q2A7 267 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 KeraO35367 351 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Fgf13P70377 245 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Tmem248Q3TBN1 314 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Apcdd1Q3U128 514 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Trpc5osQ3UHV4 110 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Eml4Q3UMY5 988 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Mup20Q5FW60 181 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Fam46bQ8C152 427 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Bloc1s5Q8R015 185 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 3110001I22RikQ9CZ70 312 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Pop7Q9DCH2 140 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Tnfrsf21Q9EPU5 655 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Chrm3Q9ERZ3 589 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Praf2Q9JIG8 178 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Coro1bQ9WUM3 484 aaKnown RBP15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Ankle1A8VU90 534 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Ssxa1B1AUS7 101 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Slc22a1O08966 556 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Lgals7O54974 136 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Nmur1O55040 428 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Alx3O70137 343 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 LipcP27656 510 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Apoc3P33622 99 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Riiad1Q3KNY5 119 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Zc3hav1Q3UPF5 946 aaKnown RBP15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Bod1Q5SQY2 173 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Olfr1161Q7TR29 321 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Pgr15lQ80T54 456 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Gpr176Q80WT4 515 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Nceh1Q8BLF1 408 aaKnown RBP15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Unc119bQ8C4B4 251 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Tmem163Q8C996 288 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Faim2Q8K097 317 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Olfr108Q8VFA1 320 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 CenpnQ9CZW2 337 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Thbs4Q9Z1T2 963 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Gm8251F6VUT6 1994 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Nup214Q80U93 2085 aa15.41■□□□□ 0.06
Shh-201ENSMUST00000002708 Gm4924A0A1B0GR71 966 aa15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 Xpnpep2B1AVD1 674 aa15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 Vmn2r18E9Q280 788 aa15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 Prdx4O08807 274 aaKnown RBP15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 Kcne1P23299 129 aa15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 Wdr75Q3U821 830 aaKnown RBP15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 Ccser2Q3UHI0 833 aa15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 Rnf44Q3UHJ8 407 aa15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 Lasp1Q61792 263 aaKnown RBP15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 Nsg1Q62092 185 aa15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 Tas2r104Q7M723 302 aa15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 Poldip3Q8BG81 420 aaKnown RBP15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 Zcchc3Q8BPK2 400 aaKnown RBP15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 Tssk6Q925K9 273 aa15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 Slc25a30Q9CR58 291 aa15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 Rnf186Q9D241 226 aa15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 2200002D01RikQ9D809 114 aa15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 Ascc3E9PZJ8 2198 aaKnown RBP15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 Zbtb34A2ATY4 518 aa15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 Vmn2r98E9PZ56 857 aa15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 Gm10799F7C7U2 104 aa15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 Bhlhe40O35185 411 aa15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 Ulk1O70405 1051 aa15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 PlauP06869 433 aa15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 PnpP23492 289 aa15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 Gabra3P26049 492 aa15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 Cd63P41731 238 aa15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 Fgf1P61148 155 aa15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 Cd80Q00609 306 aa15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 Dlk1Q09163 385 aa15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 Tmem64Q3U145 381 aa15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 Ddx5Q61656 614 aaKnown RBP15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 Morn4Q6PGF2 146 aa15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 Banf2Q8BVR0 90 aa15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 Pramef8Q8CE24 480 aa15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 FlcnQ8QZS3 579 aa15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 Mat1aQ91X83 396 aaKnown RBP15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 Dnmt3lQ9CWR8 421 aaKnown RBP15.4■□□□□ 0.06
Shh-201ENSMUST00000002708 Zfp981A2A8V7 445 aa15.39■□□□□ 0.06
Shh-201ENSMUST00000002708 Dmrtb1A2A9I7 359 aa15.39■□□□□ 0.06
Shh-201ENSMUST00000002708 Vmn1r13G5E8I3 300 aa15.39■□□□□ 0.06
Shh-201ENSMUST00000002708 Vmn1r168K7N6B6 309 aa15.39■□□□□ 0.06
Shh-201ENSMUST00000002708 C1dO35473 141 aa15.39■□□□□ 0.06
Shh-201ENSMUST00000002708 P01667 111 aa15.39■□□□□ 0.06
Shh-201ENSMUST00000002708 KapP61110 121 aa15.39■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 23 ms