RNA–Protein interactions for RNA: ENST00000639895.1

SPIN3-231, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 4,234 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-231	ENST00000639895	RAD50	Q92878	1312 aa		13.13	□□□□□ -0.31
SPIN3-231	ENST00000639895	GOLGA6L7	A0A1B0GV03	622 aa		13.13	□□□□□ -0.31
SPIN3-231	ENST00000639895	TUBB4A	P04350	444 aa		13.13	□□□□□ -0.31
SPIN3-231	ENST00000639895	CCAR1	Q8IX12	1150 aa	Known RBP	13.13	□□□□□ -0.31
SPIN3-231	ENST00000639895	CXorf56	Q9H5V9	222 aa		13.13	□□□□□ -0.31
SPIN3-231	ENST00000639895	SLC4A2	P04920	1241 aa		13.13	□□□□□ -0.31
SPIN3-231	ENST00000639895	KARS	Q15046	597 aa	Known RBP	13.13	□□□□□ -0.31
SPIN3-231	ENST00000639895	CPLX3	Q8WVH0	158 aa		13.13	□□□□□ -0.31
SPIN3-231	ENST00000639895	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	13.13	□□□□□ -0.31
SPIN3-231	ENST00000639895	HSP90AA4P	Q58FG1	418 aa		13.13	□□□□□ -0.31
SPIN3-231	ENST00000639895	ERC1	Q8IUD2	1116 aa		13.13	□□□□□ -0.31
SPIN3-231	ENST00000639895	PCMTD1	Q96MG8	357 aa	Predicted RBP	13.13	□□□□□ -0.31
SPIN3-231	ENST00000639895	KCNF1	Q9H3M0	494 aa		13.13	□□□□□ -0.31
SPIN3-231	ENST00000639895	ADCY10	Q96PN6	1610 aa		13.12	□□□□□ -0.31
SPIN3-231	ENST00000639895	EIF3CL	B5ME19	914 aa	Known RBP	13.12	□□□□□ -0.31
SPIN3-231	ENST00000639895	EPB41L2	O43491	1005 aa	Known RBP	13.12	□□□□□ -0.31
SPIN3-231	ENST00000639895	GSPT1	P15170	499 aa	Known RBP	13.12	□□□□□ -0.31
SPIN3-231	ENST00000639895	GUCY2C	P25092	1073 aa		13.12	□□□□□ -0.31
SPIN3-231	ENST00000639895	ANAPC15	P60006	121 aa		13.12	□□□□□ -0.31
SPIN3-231	ENST00000639895	EIF3C	Q99613	913 aa	Known RBP	13.12	□□□□□ -0.31
SPIN3-231	ENST00000639895	YY1AP1	Q9H869	796 aa		13.12	□□□□□ -0.31
SPIN3-231	ENST00000639895	ADAM21	Q9UKJ8	722 aa		13.12	□□□□□ -0.31
SPIN3-231	ENST00000639895	ZNF853	P0CG23	659 aa		13.12	□□□□□ -0.31
SPIN3-231	ENST00000639895	ST5	P78524	1137 aa		13.12	□□□□□ -0.31
SPIN3-231	ENST00000639895	DYDC1	Q8WWB3	177 aa		13.12	□□□□□ -0.31
SPIN3-231	ENST00000639895	SAMD9L	Q8IVG5	1584 aa		13.12	□□□□□ -0.31
SPIN3-231	ENST00000639895	UBTFL1	P0CB47	393 aa	Predicted RBP	13.12	□□□□□ -0.31
SPIN3-231	ENST00000639895	PDE1A	P54750	535 aa		13.12	□□□□□ -0.31
SPIN3-231	ENST00000639895	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.12	□□□□□ -0.31
SPIN3-231	ENST00000639895	SRL	Q86TD4	932 aa		13.12	□□□□□ -0.31
SPIN3-231	ENST00000639895	COG3	Q96JB2	828 aa		13.12	□□□□□ -0.31
SPIN3-231	ENST00000639895	ZDHHC9	Q9Y397	364 aa		13.12	□□□□□ -0.31
SPIN3-231	ENST00000639895	NPC1L1	Q9UHC9	1359 aa		13.12	□□□□□ -0.31
SPIN3-231	ENST00000639895	GOLGA6L9	A6NEM1	432 aa		13.12	□□□□□ -0.31
SPIN3-231	ENST00000639895	AK2	P54819	239 aa		13.12	□□□□□ -0.31
SPIN3-231	ENST00000639895	ANKRD1	Q15327	319 aa		13.12	□□□□□ -0.31
SPIN3-231	ENST00000639895	MMS22L	Q6ZRQ5	1243 aa		13.12	□□□□□ -0.31
SPIN3-231	ENST00000639895	PDE11A	Q9HCR9	933 aa		13.12	□□□□□ -0.31
SPIN3-231	ENST00000639895	GNAI3	P08754	354 aa		13.11	□□□□□ -0.31
SPIN3-231	ENST00000639895	EIF5	P55010	431 aa	Known RBP	13.11	□□□□□ -0.31
SPIN3-231	ENST00000639895	GUCY1B3	Q02153	619 aa		13.11	□□□□□ -0.31
SPIN3-231	ENST00000639895	BIRC2	Q13490	618 aa		13.11	□□□□□ -0.31
SPIN3-231	ENST00000639895	TCEANC2	Q96MN5	208 aa		13.11	□□□□□ -0.31
SPIN3-231	ENST00000639895	PRAM1	Q96QH2	718 aa		13.11	□□□□□ -0.31
SPIN3-231	ENST00000639895	KIF2C	Q99661	725 aa		13.11	□□□□□ -0.31
SPIN3-231	ENST00000639895	JPH2	Q9BR39	696 aa	Predicted RBP	13.11	□□□□□ -0.31
SPIN3-231	ENST00000639895	ABCC2	Q92887	1545 aa		13.11	□□□□□ -0.31
SPIN3-231	ENST00000639895	CPA1	P15085	419 aa		13.11	□□□□□ -0.31
SPIN3-231	ENST00000639895	DDIT3	P35638	169 aa		13.11	□□□□□ -0.31
SPIN3-231	ENST00000639895	AFAP1L1	Q8TED9	768 aa		13.11	□□□□□ -0.31
SPIN3-231	ENST00000639895	EXOC4	Q96A65	974 aa		13.11	□□□□□ -0.31
SPIN3-231	ENST00000639895	SLC24A3	Q9HC58	644 aa		13.11	□□□□□ -0.31
SPIN3-231	ENST00000639895	SUFU	Q9UMX1	484 aa		13.11	□□□□□ -0.31
SPIN3-231	ENST00000639895	ELP1	O95163	1332 aa		13.11	□□□□□ -0.31
SPIN3-231	ENST00000639895	FRMD3	A2A2Y4	597 aa		13.11	□□□□□ -0.31
SPIN3-231	ENST00000639895	TULP1	O00294	542 aa	Predicted RBP	13.11	□□□□□ -0.31
SPIN3-231	ENST00000639895	PPFIA3	O75145	1194 aa		13.11	□□□□□ -0.31
SPIN3-231	ENST00000639895	WDHD1	O75717	1129 aa	Predicted RBP	13.11	□□□□□ -0.31
SPIN3-231	ENST00000639895	PEX19	P40855	299 aa		13.11	□□□□□ -0.31
SPIN3-231	ENST00000639895	NAP1L1	P55209	391 aa	Known RBP	13.11	□□□□□ -0.31
SPIN3-231	ENST00000639895	UBASH3A	P57075	661 aa		13.11	□□□□□ -0.31
SPIN3-231	ENST00000639895	ARID5B	Q14865	1188 aa		13.11	□□□□□ -0.31
SPIN3-231	ENST00000639895	MEX3C	Q5U5Q3	659 aa	Known RBP	13.11	□□□□□ -0.31
SPIN3-231	ENST00000639895	CCDC30	Q5VVM6	783 aa		13.11	□□□□□ -0.31
SPIN3-231	ENST00000639895	STK11IP	Q8N1F8	1099 aa		13.11	□□□□□ -0.31
SPIN3-231	ENST00000639895	ZEB2	O60315	1214 aa		13.1	□□□□□ -0.31
SPIN3-231	ENST00000639895	ODF2	Q5BJF6	829 aa		13.1	□□□□□ -0.31
SPIN3-231	ENST00000639895	CDC42BPA	Q5VT25	1732 aa		13.1	□□□□□ -0.31
SPIN3-231	ENST00000639895	GCK	P35557	465 aa		13.1	□□□□□ -0.31
SPIN3-231	ENST00000639895	ETF1	P62495	437 aa	Known RBP	13.1	□□□□□ -0.31
SPIN3-231	ENST00000639895	CCDC148	Q8NFR7	591 aa		13.1	□□□□□ -0.31
SPIN3-231	ENST00000639895	FSD1	Q9BTV5	496 aa		13.1	□□□□□ -0.31
SPIN3-231	ENST00000639895	POLR3A	O14802	1390 aa	Predicted RBP	13.1	□□□□□ -0.31
SPIN3-231	ENST00000639895	CTAGE15	A4D2H0	777 aa		13.1	□□□□□ -0.31
SPIN3-231	ENST00000639895	GOLGA6L10	A6NI86	522 aa		13.1	□□□□□ -0.31
SPIN3-231	ENST00000639895	CTAGE8	P0CG41	777 aa		13.1	□□□□□ -0.31
SPIN3-231	ENST00000639895	CTAGE6	Q86UF2	777 aa		13.1	□□□□□ -0.31
SPIN3-231	ENST00000639895	CTAGE4	Q8IX94	777 aa		13.1	□□□□□ -0.31
SPIN3-231	ENST00000639895	OSCAR	Q8IYS5	282 aa		13.1	□□□□□ -0.31
SPIN3-231	ENST00000639895	CLASRP	Q8N2M8	674 aa	Known RBP	13.1	□□□□□ -0.31
SPIN3-231	ENST00000639895	CARD14	Q9BXL6	1004 aa		13.1	□□□□□ -0.31
SPIN3-231	ENST00000639895	DCTPP1	Q9H773	170 aa		13.1	□□□□□ -0.31
SPIN3-231	ENST00000639895	C14orf93	Q9H972	538 aa	Known RBP	13.1	□□□□□ -0.31
SPIN3-231	ENST00000639895	ZBTB7B	O15156	539 aa	Predicted RBP	13.09	□□□□□ -0.31
SPIN3-231	ENST00000639895	FMNL3	Q8IVF7	1028 aa		13.09	□□□□□ -0.31
SPIN3-231	ENST00000639895	ATRIP	Q8WXE1	791 aa		13.09	□□□□□ -0.31
SPIN3-231	ENST00000639895	LZTFL1	Q9NQ48	299 aa		13.09	□□□□□ -0.31
SPIN3-231	ENST00000639895	MYO6	Q9UM54	1294 aa		13.09	□□□□□ -0.31
SPIN3-231	ENST00000639895	CAPN7	Q9Y6W3	813 aa		13.09	□□□□□ -0.31
SPIN3-231	ENST00000639895	SLC3A2	P08195	630 aa	Known RBP	13.09	□□□□□ -0.31
SPIN3-231	ENST00000639895	FILIP1L	Q4L180	1135 aa		13.09	□□□□□ -0.31
SPIN3-231	ENST00000639895	CROCC2	H7BZ55	1655 aa		13.09	□□□□□ -0.31
SPIN3-231	ENST00000639895	GPR161	Q8N6U8	529 aa	Known RBP	13.09	□□□□□ -0.31
SPIN3-231	ENST00000639895	RASSF8	Q8NHQ8	419 aa		13.09	□□□□□ -0.31
SPIN3-231	ENST00000639895	AP1AR	Q63HQ0	302 aa		13.09	□□□□□ -0.31
SPIN3-231	ENST00000639895	EFCAB13	Q8IY85	973 aa		13.09	□□□□□ -0.31
SPIN3-231	ENST00000639895	VEZT	Q9HBM0	779 aa		13.09	□□□□□ -0.31
SPIN3-231	ENST00000639895	SLC52A1	Q9NWF4	448 aa		13.09	□□□□□ -0.31
SPIN3-231	ENST00000639895	RTEL1-TNFRSF6B	F6WH68	1400 aa		13.08	□□□□□ -0.32
SPIN3-231	ENST00000639895	ATAD2	Q6PL18	1390 aa		13.08	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms