RNA–Protein interactions for RNA: ENST00000639083.1

TARDBP-230, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TARDBP, Length 2,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-230ENST00000639083 CHMP3Q9Y3E7 222 aa13.16□□□□□ -0.3
TARDBP-230ENST00000639083 AFDNP55196 1824 aaKnown RBP13.16□□□□□ -0.3
TARDBP-230ENST00000639083 KIF6Q6ZMV9 814 aa13.15□□□□□ -0.3
TARDBP-230ENST00000639083 C8orf37Q96NL8 207 aa13.15□□□□□ -0.3
TARDBP-230ENST00000639083 ANO2Q9NQ90 1003 aa13.15□□□□□ -0.3
TARDBP-230ENST00000639083 TLR7Q9NYK1 1049 aaKnown RBP13.15□□□□□ -0.3
TARDBP-230ENST00000639083 SLIT2O94813 1529 aa13.15□□□□□ -0.3
TARDBP-230ENST00000639083 RABEP1Q15276 862 aa13.15□□□□□ -0.3
TARDBP-230ENST00000639083 BARGINQ6ZT62 677 aa13.15□□□□□ -0.3
TARDBP-230ENST00000639083 NGLY1Q96IV0 654 aa13.15□□□□□ -0.3
TARDBP-230ENST00000639083 TUBGCP6Q96RT7 1819 aa13.15□□□□□ -0.3
TARDBP-230ENST00000639083 ZBTB1Q9Y2K1 713 aa13.15□□□□□ -0.3
TARDBP-230ENST00000639083 NRAPQ86VF7 1730 aa13.14□□□□□ -0.31
TARDBP-230ENST00000639083 TFCP2Q12800 502 aa13.14□□□□□ -0.31
TARDBP-230ENST00000639083 LRP6O75581 1613 aa13.14□□□□□ -0.31
TARDBP-230ENST00000639083 MAP3K15Q6ZN16 1313 aa13.14□□□□□ -0.31
TARDBP-230ENST00000639083 FRAT2O75474 233 aaPredicted RBP13.14□□□□□ -0.31
TARDBP-230ENST00000639083 HLFQ16534 295 aa13.14□□□□□ -0.31
TARDBP-230ENST00000639083 NUP188Q5SRE5 1749 aa13.13□□□□□ -0.31
TARDBP-230ENST00000639083 TRIM28Q13263 835 aaKnown RBP13.13□□□□□ -0.31
TARDBP-230ENST00000639083 FAM98CQ17RN3 349 aaKnown RBP13.13□□□□□ -0.31
TARDBP-230ENST00000639083 GIGYF2Q6Y7W6 1299 aaKnown RBP13.13□□□□□ -0.31
TARDBP-230ENST00000639083 K7ELQ4 463 aaPredicted RBP13.13□□□□□ -0.31
TARDBP-230ENST00000639083 FAM89AQ96GI7 184 aa13.13□□□□□ -0.31
TARDBP-230ENST00000639083 CWC27Q6UX04 472 aaKnown RBP13.12□□□□□ -0.31
TARDBP-230ENST00000639083 BOLA2Q9H3K6 86 aa13.12□□□□□ -0.31
TARDBP-230ENST00000639083 WNK3Q9BYP7 1800 aa13.12□□□□□ -0.31
TARDBP-230ENST00000639083 SGSM2O43147 1006 aa13.11□□□□□ -0.31
TARDBP-230ENST00000639083 GPTP24298 496 aa13.11□□□□□ -0.31
TARDBP-230ENST00000639083 TNNI3KQ59H18 835 aa13.11□□□□□ -0.31
TARDBP-230ENST00000639083 FPGT-TNNI3KV9GXZ4 949 aa13.11□□□□□ -0.31
TARDBP-230ENST00000639083 KCNQ2O43526 872 aa13.11□□□□□ -0.31
TARDBP-230ENST00000639083 ATP6V1AP38606 617 aa13.11□□□□□ -0.31
TARDBP-230ENST00000639083 EVI5LQ96CN4 794 aa13.11□□□□□ -0.31
TARDBP-230ENST00000639083 ZNF594Q96JF6 807 aaPredicted RBP13.11□□□□□ -0.31
TARDBP-230ENST00000639083 DBNLQ9UJU6 430 aaKnown RBP13.11□□□□□ -0.31
TARDBP-230ENST00000639083 PALD1Q9ULE6 856 aa13.11□□□□□ -0.31
TARDBP-230ENST00000639083 TBC1D2BQ9UPU7 963 aa13.11□□□□□ -0.31
TARDBP-230ENST00000639083 JCADQ9P266 1359 aa13.11□□□□□ -0.31
TARDBP-230ENST00000639083 PCCAP05165 728 aaPredicted RBP13.1□□□□□ -0.31
TARDBP-230ENST00000639083 HSP90AA1P07900 732 aaKnown RBP13.1□□□□□ -0.31
TARDBP-230ENST00000639083 IL6STP40189 918 aaPredicted RBP13.1□□□□□ -0.31
TARDBP-230ENST00000639083 ATG9AQ7Z3C6 839 aa13.1□□□□□ -0.31
TARDBP-230ENST00000639083 SYNE4Q8N205 404 aa13.1□□□□□ -0.31
TARDBP-230ENST00000639083 FOXD4L1Q9NU39 408 aa13.1□□□□□ -0.31
TARDBP-230ENST00000639083 CHMP5Q9NZZ3 219 aa13.1□□□□□ -0.31
TARDBP-230ENST00000639083 BCL9LQ86UU0 1499 aa13.1□□□□□ -0.31
TARDBP-230ENST00000639083 DOT1LQ8TEK3 1739 aa13.1□□□□□ -0.31
TARDBP-230ENST00000639083 LOC102724428A0A0B4J2F2 783 aa13.1□□□□□ -0.31
TARDBP-230ENST00000639083 MCCP23508 829 aa13.1□□□□□ -0.31
TARDBP-230ENST00000639083 SIK1P57059 783 aa13.1□□□□□ -0.31
TARDBP-230ENST00000639083 DZIP3Q86Y13 1208 aaKnown RBP13.1□□□□□ -0.31
TARDBP-230ENST00000639083 ZBTB38Q8NAP3 1195 aaPredicted RBP13.1□□□□□ -0.31
TARDBP-230ENST00000639083 DIAPH3Q9NSV4 1193 aa13.1□□□□□ -0.31
TARDBP-230ENST00000639083 VPS72Q15906 364 aa13.09□□□□□ -0.31
TARDBP-230ENST00000639083 LRRC24Q50LG9 513 aa13.09□□□□□ -0.31
TARDBP-230ENST00000639083 NLRP10Q86W26 655 aa13.09□□□□□ -0.31
TARDBP-230ENST00000639083 CCDC85AQ96PX6 553 aaPredicted RBP13.09□□□□□ -0.31
TARDBP-230ENST00000639083 NWD2Q9ULI1 1742 aa13.09□□□□□ -0.31
TARDBP-230ENST00000639083 ST18O60284 1047 aa13.09□□□□□ -0.31
TARDBP-230ENST00000639083 DDIT3P35638 169 aa13.09□□□□□ -0.31
TARDBP-230ENST00000639083 INTS5Q6P9B9 1019 aaKnown RBP13.09□□□□□ -0.31
TARDBP-230ENST00000639083 DBNDD2Q9BQY9 259 aa13.09□□□□□ -0.31
TARDBP-230ENST00000639083 TJP1Q07157 1748 aa13.09□□□□□ -0.31
TARDBP-230ENST00000639083 CRKLP46109 303 aaKnown RBP13.08□□□□□ -0.32
TARDBP-230ENST00000639083 NEK4P51957 841 aa13.08□□□□□ -0.32
TARDBP-230ENST00000639083 ITPK1Q13572 414 aa13.08□□□□□ -0.32
TARDBP-230ENST00000639083 CCDC57Q2TAC2 916 aa13.08□□□□□ -0.32
TARDBP-230ENST00000639083 HSP90AB3PQ58FF7 597 aa13.08□□□□□ -0.32
TARDBP-230ENST00000639083 FNBP4Q8N3X1 1017 aaPredicted RBP13.08□□□□□ -0.32
TARDBP-230ENST00000639083 PUS3Q9BZE2 481 aaKnown RBP13.08□□□□□ -0.32
TARDBP-230ENST00000639083 ERVV-1B6SEH8 477 aa13.08□□□□□ -0.32
TARDBP-230ENST00000639083 EYA2O00167 538 aa13.08□□□□□ -0.32
TARDBP-230ENST00000639083 EPB41L2O43491 1005 aaKnown RBP13.08□□□□□ -0.32
TARDBP-230ENST00000639083 IL15P40933 162 aaPredicted RBP13.08□□□□□ -0.32
TARDBP-230ENST00000639083 EIF5P55010 431 aaKnown RBP13.08□□□□□ -0.32
TARDBP-230ENST00000639083 ANAPC15P60006 121 aa13.08□□□□□ -0.32
TARDBP-230ENST00000639083 KIAA1211Q6ZU35 1233 aa13.08□□□□□ -0.32
TARDBP-230ENST00000639083 RUFY2Q8WXA3 655 aa13.08□□□□□ -0.32
TARDBP-230ENST00000639083 LSG1Q9H089 658 aaKnown RBP13.08□□□□□ -0.32
TARDBP-230ENST00000639083 CCDC87Q9NVE4 849 aa13.08□□□□□ -0.32
TARDBP-230ENST00000639083 ATP5JP18859 108 aa13.07□□□□□ -0.32
TARDBP-230ENST00000639083 HSPA4P34932 840 aa13.07□□□□□ -0.32
TARDBP-230ENST00000639083 TIMM10P62072 90 aa13.07□□□□□ -0.32
TARDBP-230ENST00000639083 EDC3Q96F86 508 aaKnown RBP13.07□□□□□ -0.32
TARDBP-230ENST00000639083 NEUROD6Q96NK8 337 aa13.07□□□□□ -0.32
TARDBP-230ENST00000639083 PLA2G12BQ9BX93 195 aa13.07□□□□□ -0.32
TARDBP-230ENST00000639083 PALLDQ8WX93 1383 aa13.06□□□□□ -0.32
TARDBP-230ENST00000639083 CSF1RP07333 972 aa13.06□□□□□ -0.32
TARDBP-230ENST00000639083 FAM227BQ96M60 508 aa13.06□□□□□ -0.32
TARDBP-230ENST00000639083 TRMT112Q9UI30 125 aaKnown RBP13.06□□□□□ -0.32
TARDBP-230ENST00000639083 USP21Q9UK80 565 aa13.06□□□□□ -0.32
TARDBP-230ENST00000639083 NDUFB9Q9Y6M9 179 aa13.06□□□□□ -0.32
TARDBP-230ENST00000639083 RAD50Q92878 1312 aa13.06□□□□□ -0.32
TARDBP-230ENST00000639083 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.06□□□□□ -0.32
TARDBP-230ENST00000639083 AK9Q5TCS8 1911 aa13.06□□□□□ -0.32
TARDBP-230ENST00000639083 FSD1Q9BTV5 496 aa13.06□□□□□ -0.32
TARDBP-230ENST00000639083 CIAO1O76071 339 aa13.05□□□□□ -0.32
TARDBP-230ENST00000639083 PTH1RQ03431 593 aa13.05□□□□□ -0.32
TARDBP-230ENST00000639083 NMIQ13287 307 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms