RNA–Protein interactions for RNA: ENST00000634403.1

SMARCA2-222, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 2

Gene SMARCA2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-222	ENST00000634403	FOXO3	O43524	673 aa		7.58	□□□□□ -1.2
SMARCA2-222	ENST00000634403	PPP1R12B	O60237	982 aa	Predicted RBP	7.58	□□□□□ -1.2
SMARCA2-222	ENST00000634403	CTC1	Q2NKJ3	1217 aa		7.58	□□□□□ -1.2
SMARCA2-222	ENST00000634403	FOXD4L5	Q5VV16	416 aa	Predicted RBP	7.58	□□□□□ -1.2
SMARCA2-222	ENST00000634403	TXNDC2	Q86VQ3	553 aa		7.58	□□□□□ -1.2
SMARCA2-222	ENST00000634403	NBPF15	Q8N660	670 aa		7.58	□□□□□ -1.2
SMARCA2-222	ENST00000634403	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	7.58	□□□□□ -1.2
SMARCA2-222	ENST00000634403	PODXL2	Q9NZ53	605 aa		7.58	□□□□□ -1.2
SMARCA2-222	ENST00000634403	GNE	Q9Y223	722 aa	Known RBP	7.58	□□□□□ -1.2
SMARCA2-222	ENST00000634403	FAM135A	Q9P2D6	1515 aa		7.57	□□□□□ -1.2
SMARCA2-222	ENST00000634403	SPAG9	O60271	1321 aa	Known RBP	7.57	□□□□□ -1.2
SMARCA2-222	ENST00000634403	FANCA	O15360	1455 aa		7.57	□□□□□ -1.2
SMARCA2-222	ENST00000634403	IQGAP3	Q86VI3	1631 aa		7.57	□□□□□ -1.2
SMARCA2-222	ENST00000634403	CDK2AP1	O14519	115 aa		7.57	□□□□□ -1.2
SMARCA2-222	ENST00000634403	CENPB	P07199	599 aa	Predicted RBP	7.57	□□□□□ -1.2
SMARCA2-222	ENST00000634403	ARID4A	P29374	1257 aa	Predicted RBP	7.57	□□□□□ -1.2
SMARCA2-222	ENST00000634403	GPC1	P35052	558 aa		7.57	□□□□□ -1.2
SMARCA2-222	ENST00000634403	CTSO	P43234	321 aa	Predicted RBP	7.57	□□□□□ -1.2
SMARCA2-222	ENST00000634403	SMCP	P49901	116 aa	Predicted RBP	7.57	□□□□□ -1.2
SMARCA2-222	ENST00000634403	NBPF8	Q3BBV2	869 aa		7.57	□□□□□ -1.2
SMARCA2-222	ENST00000634403	SLC27A3	Q5K4L6	730 aa		7.57	□□□□□ -1.2
SMARCA2-222	ENST00000634403	CAPN12	Q6ZSI9	719 aa		7.57	□□□□□ -1.2
SMARCA2-222	ENST00000634403	TRIM46	Q7Z4K8	759 aa		7.57	□□□□□ -1.2
SMARCA2-222	ENST00000634403	UHRF1BP1	Q6BDS2	1440 aa		7.56	□□□□□ -1.2
SMARCA2-222	ENST00000634403	AXIN1	O15169	862 aa		7.56	□□□□□ -1.2
SMARCA2-222	ENST00000634403	SERPINB4	P48594	390 aa		7.56	□□□□□ -1.2
SMARCA2-222	ENST00000634403	RNF144A	P50876	292 aa	Predicted RBP	7.56	□□□□□ -1.2
SMARCA2-222	ENST00000634403	PSMA6	P60900	246 aa	Known RBP	7.56	□□□□□ -1.2
SMARCA2-222	ENST00000634403	SCARF1	Q14162	830 aa		7.56	□□□□□ -1.2
SMARCA2-222	ENST00000634403	TMEM214	Q6NUQ4	689 aa	Known RBP	7.56	□□□□□ -1.2
SMARCA2-222	ENST00000634403	GRIP2	Q9C0E4	1043 aa		7.56	□□□□□ -1.2
SMARCA2-222	ENST00000634403	GZF1	Q9H116	711 aa	Predicted RBP	7.56	□□□□□ -1.2
SMARCA2-222	ENST00000634403	SCAPER	Q9BY12	1400 aa		7.55	□□□□□ -1.2
SMARCA2-222	ENST00000634403	ST8SIA5	O15466	376 aa		7.55	□□□□□ -1.2
SMARCA2-222	ENST00000634403	HSPA5	P11021	654 aa	Known RBP	7.55	□□□□□ -1.2
SMARCA2-222	ENST00000634403	GTF2E1	P29083	439 aa	Predicted RBP	7.55	□□□□□ -1.2
SMARCA2-222	ENST00000634403	DDX10	Q13206	875 aa	Known RBP	7.55	□□□□□ -1.2
SMARCA2-222	ENST00000634403	LAPTM4A	Q15012	233 aa		7.55	□□□□□ -1.2
SMARCA2-222	ENST00000634403	ZNF295-AS1	Q8N0V1	137 aa		7.55	□□□□□ -1.2
SMARCA2-222	ENST00000634403	CRIPAK	Q8N1N5	446 aa		7.55	□□□□□ -1.2
SMARCA2-222	ENST00000634403	AFAP1	Q8N556	730 aa		7.55	□□□□□ -1.2
SMARCA2-222	ENST00000634403	ZDHHC1	Q8WTX9	485 aa		7.55	□□□□□ -1.2
SMARCA2-222	ENST00000634403	VTI1A	Q96AJ9	217 aa		7.55	□□□□□ -1.2
SMARCA2-222	ENST00000634403	C2orf49	Q9BVC5	232 aa	Predicted RBP	7.55	□□□□□ -1.2
SMARCA2-222	ENST00000634403	CABP1	Q9NZU7	370 aa		7.55	□□□□□ -1.2
SMARCA2-222	ENST00000634403	SEPT3	Q9UH03	358 aa		7.55	□□□□□ -1.2
SMARCA2-222	ENST00000634403	CHMP3	Q9Y3E7	222 aa		7.55	□□□□□ -1.2
SMARCA2-222	ENST00000634403	ZFYVE16	Q7Z3T8	1539 aa		7.55	□□□□□ -1.2
SMARCA2-222	ENST00000634403	ATP10A	O60312	1499 aa		7.55	□□□□□ -1.2
SMARCA2-222	ENST00000634403	ADGRL1	O94910	1474 aa		7.55	□□□□□ -1.2
SMARCA2-222	ENST00000634403	CFAP74	Q9C0B2	1584 aa		7.54	□□□□□ -1.2
SMARCA2-222	ENST00000634403	INO80	Q9ULG1	1556 aa	Predicted RBP	7.54	□□□□□ -1.2
SMARCA2-222	ENST00000634403	PTCD1	O75127	700 aa	Known RBP	7.54	□□□□□ -1.2
SMARCA2-222	ENST00000634403	GNAS	Q5JWF2	1037 aa		7.54	□□□□□ -1.2
SMARCA2-222	ENST00000634403	SH3PXD2A	Q5TCZ1	1133 aa		7.54	□□□□□ -1.2
SMARCA2-222	ENST00000634403	STAG2	Q8N3U4	1231 aa		7.54	□□□□□ -1.2
SMARCA2-222	ENST00000634403	RNF217	Q8TC41	542 aa		7.54	□□□□□ -1.2
SMARCA2-222	ENST00000634403	RHBDD1	Q8TEB9	315 aa		7.54	□□□□□ -1.2
SMARCA2-222	ENST00000634403	MTMR7	Q9Y216	660 aa		7.54	□□□□□ -1.2
SMARCA2-222	ENST00000634403	PARP3	Q9Y6F1	533 aa		7.54	□□□□□ -1.2
SMARCA2-222	ENST00000634403	CD109	Q6YHK3	1445 aa		7.53	□□□□□ -1.2
SMARCA2-222	ENST00000634403	SPATA31E1	Q6ZUB1	1445 aa		7.53	□□□□□ -1.2
SMARCA2-222	ENST00000634403	ATP7A	Q04656	1500 aa		7.53	□□□□□ -1.2
SMARCA2-222	ENST00000634403	SERTM1	A2A2V5	107 aa		7.53	□□□□□ -1.2
SMARCA2-222	ENST00000634403	TTLL8	A6PVC2	850 aa		7.53	□□□□□ -1.2
SMARCA2-222	ENST00000634403	EML1	O00423	815 aa		7.53	□□□□□ -1.2
SMARCA2-222	ENST00000634403	ABL1	P00519	1130 aa		7.53	□□□□□ -1.2
SMARCA2-222	ENST00000634403	NAA30	Q147X3	362 aa	Predicted RBP	7.53	□□□□□ -1.2
SMARCA2-222	ENST00000634403	TEAD4	Q15561	434 aa		7.53	□□□□□ -1.2
SMARCA2-222	ENST00000634403	COL26A1	Q96A83	441 aa		7.53	□□□□□ -1.2
SMARCA2-222	ENST00000634403	HIRIP3	Q9BW71	556 aa	Predicted RBP	7.53	□□□□□ -1.2
SMARCA2-222	ENST00000634403	NIFK	Q9BYG3	293 aa	Known RBP	7.53	□□□□□ -1.2
SMARCA2-222	ENST00000634403	ZNF232	Q9UNY5	417 aa		7.53	□□□□□ -1.2
SMARCA2-222	ENST00000634403	DHX29	Q7Z478	1369 aa	Known RBP	7.53	□□□□□ -1.2
SMARCA2-222	ENST00000634403	PLA2R1	Q13018	1463 aa		7.53	□□□□□ -1.2
SMARCA2-222	ENST00000634403	NOS2	P35228	1153 aa		7.52	□□□□□ -1.21
SMARCA2-222	ENST00000634403	PLA2G4A	P47712	749 aa		7.52	□□□□□ -1.21
SMARCA2-222	ENST00000634403	ZNF211	Q13398	564 aa	Predicted RBP	7.52	□□□□□ -1.21
SMARCA2-222	ENST00000634403	C4orf17	Q53FE4	359 aa		7.52	□□□□□ -1.21
SMARCA2-222	ENST00000634403	POTEA	Q6S8J7	498 aa		7.52	□□□□□ -1.21
SMARCA2-222	ENST00000634403	NGLY1	Q96IV0	654 aa		7.52	□□□□□ -1.21
SMARCA2-222	ENST00000634403	ZFP42	Q96MM3	310 aa		7.52	□□□□□ -1.21
SMARCA2-222	ENST00000634403	IRX2	Q9BZI1	471 aa	Predicted RBP	7.52	□□□□□ -1.21
SMARCA2-222	ENST00000634403	AAAS	Q9NRG9	546 aa		7.52	□□□□□ -1.21
SMARCA2-222	ENST00000634403	DEPDC5	O75140	1603 aa		7.52	□□□□□ -1.21
SMARCA2-222	ENST00000634403	EIF2AK4	Q9P2K8	1649 aa	Known RBP	7.52	□□□□□ -1.21
SMARCA2-222	ENST00000634403	SOS2	Q07890	1332 aa	Predicted RBP	7.52	□□□□□ -1.21
SMARCA2-222	ENST00000634403	VWDE	Q8N2E2	1590 aa		7.51	□□□□□ -1.21
SMARCA2-222	ENST00000634403	ZNF518A	Q6AHZ1	1483 aa		7.51	□□□□□ -1.21
SMARCA2-222	ENST00000634403	RALGAPB	Q86X10	1494 aa		7.51	□□□□□ -1.21
SMARCA2-222	ENST00000634403	NEO1	Q92859	1461 aa		7.51	□□□□□ -1.21
SMARCA2-222	ENST00000634403	SPATA31C2	B4DYI2	1134 aa		7.51	□□□□□ -1.21
SMARCA2-222	ENST00000634403	PHKA2	P46019	1235 aa		7.51	□□□□□ -1.21
SMARCA2-222	ENST00000634403	PRICKLE2	Q7Z3G6	844 aa		7.51	□□□□□ -1.21
SMARCA2-222	ENST00000634403	GTF3C2	Q8WUA4	911 aa	Predicted RBP	7.51	□□□□□ -1.21
SMARCA2-222	ENST00000634403	ATP13A2	Q9NQ11	1180 aa		7.51	□□□□□ -1.21
SMARCA2-222	ENST00000634403	ANO2	Q9NQ90	1003 aa		7.51	□□□□□ -1.21
SMARCA2-222	ENST00000634403	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	7.51	□□□□□ -1.21
SMARCA2-222	ENST00000634403	CCDC144A	A2RUR9	1427 aa		7.51	□□□□□ -1.21
SMARCA2-222	ENST00000634403	GLI2	P10070	1586 aa		7.5	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms