RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 COL5A3P25940 1745 aaPredicted RBP21.49■■□□□ 1.03
PCF11-207ENST00000624931 LINS1Q8NG48 757 aa21.49■■□□□ 1.03
PCF11-207ENST00000624931 PLBD2Q8NHP8 589 aa21.49■■□□□ 1.03
PCF11-207ENST00000624931 DCTPP1Q9H773 170 aa21.49■■□□□ 1.03
PCF11-207ENST00000624931 RREB1Q92766 1687 aa21.48■■□□□ 1.03
PCF11-207ENST00000624931 ALDH1L1O75891 902 aa21.48■■□□□ 1.03
PCF11-207ENST00000624931 RBM6P78332 1123 aaKnown RBP21.48■■□□□ 1.03
PCF11-207ENST00000624931 CASC1Q6TDU7 716 aa21.48■■□□□ 1.03
PCF11-207ENST00000624931 ATP5J2-PTCD1G3V325 749 aa21.47■■□□□ 1.03
PCF11-207ENST00000624931 PPP1R9BQ96SB3 815 aa21.47■■□□□ 1.03
PCF11-207ENST00000624931 MYH14Q7Z406 1995 aaKnown RBP21.47■■□□□ 1.03
PCF11-207ENST00000624931 NEURL1BA8MQ27 555 aa21.46■■□□□ 1.03
PCF11-207ENST00000624931 KRT27Q7Z3Y8 459 aa21.46■■□□□ 1.03
PCF11-207ENST00000624931 RPAP2Q8IXW5 612 aaPredicted RBP21.46■■□□□ 1.03
PCF11-207ENST00000624931 RGS17Q9UGC6 210 aaPredicted RBP21.46■■□□□ 1.03
PCF11-207ENST00000624931 CRKLP46109 303 aaKnown RBP21.46■■□□□ 1.03
PCF11-207ENST00000624931 INTS5Q6P9B9 1019 aaKnown RBP21.46■■□□□ 1.03
PCF11-207ENST00000624931 RRP9O43818 475 aaKnown RBP21.45■■□□□ 1.02
PCF11-207ENST00000624931 NEXNQ0ZGT2 675 aa21.45■■□□□ 1.02
PCF11-207ENST00000624931 LINC00116Q8NCU8 138 aa21.45■■□□□ 1.02
PCF11-207ENST00000624931 JARID2Q92833 1246 aaPredicted RBP21.45■■□□□ 1.02
PCF11-207ENST00000624931 ZNF831Q5JPB2 1677 aa21.45■■□□□ 1.02
PCF11-207ENST00000624931 TTC22Q5TAA0 569 aa21.44■■□□□ 1.02
PCF11-207ENST00000624931 PLEKHM2Q8IWE5 1019 aa21.44■■□□□ 1.02
PCF11-207ENST00000624931 CCDC87Q9NVE4 849 aa21.44■■□□□ 1.02
PCF11-207ENST00000624931 C9orf78Q9NZ63 289 aaPredicted RBP21.44■■□□□ 1.02
PCF11-207ENST00000624931 PNMA6EA0A0J9YXQ4 647 aa21.43■■□□□ 1.02
PCF11-207ENST00000624931 BAG4O95429 457 aaKnown RBP21.43■■□□□ 1.02
PCF11-207ENST00000624931 TPM2P07951 284 aa21.43■■□□□ 1.02
PCF11-207ENST00000624931 LY75O60449 1722 aa21.43■■□□□ 1.02
PCF11-207ENST00000624931 GRM8O00222 908 aa21.43■■□□□ 1.02
PCF11-207ENST00000624931 ZNF445P59923 1031 aa21.43■■□□□ 1.02
PCF11-207ENST00000624931 HS1BP3Q53T59 392 aa21.43■■□□□ 1.02
PCF11-207ENST00000624931 GAS2L3Q86XJ1 694 aa21.43■■□□□ 1.02
PCF11-207ENST00000624931 GCKRQ14397 625 aa21.42■■□□□ 1.02
PCF11-207ENST00000624931 KIF6Q6ZMV9 814 aa21.42■■□□□ 1.02
PCF11-207ENST00000624931 SUCLG2Q96I99 432 aa21.41■■□□□ 1.02
PCF11-207ENST00000624931 DDX49Q9Y6V7 483 aaKnown RBP21.41■■□□□ 1.02
PCF11-207ENST00000624931 CD2BP2O95400 341 aaKnown RBP21.41■■□□□ 1.02
PCF11-207ENST00000624931 SSFA2P28290 1259 aa21.41■■□□□ 1.02
PCF11-207ENST00000624931 NASPP49321 788 aaPredicted RBP21.41■■□□□ 1.02
PCF11-207ENST00000624931 POTEAQ6S8J7 498 aa21.41■■□□□ 1.02
PCF11-207ENST00000624931 USP26Q9BXU7 913 aa21.41■■□□□ 1.02
PCF11-207ENST00000624931 ST18O60284 1047 aa21.4■■□□□ 1.02
PCF11-207ENST00000624931 RXRBP28702 533 aa21.4■■□□□ 1.02
PCF11-207ENST00000624931 HLFQ16534 295 aa21.4■■□□□ 1.02
PCF11-207ENST00000624931 TBC1D2BQ9UPU7 963 aa21.4■■□□□ 1.02
PCF11-207ENST00000624931 UTYO14607 1347 aa21.39■■□□□ 1.02
PCF11-207ENST00000624931 MAP3K15Q6ZN16 1313 aa21.39■■□□□ 1.02
PCF11-207ENST00000624931 GSPT1P15170 499 aaKnown RBP21.39■■□□□ 1.01
PCF11-207ENST00000624931 IL6STP40189 918 aaPredicted RBP21.39■■□□□ 1.01
PCF11-207ENST00000624931 ATP8B2P98198 1209 aa21.39■■□□□ 1.01
PCF11-207ENST00000624931 FAM196AQ6ZSG2 479 aa21.39■■□□□ 1.01
PCF11-207ENST00000624931 SMIM5Q71RC9 77 aa21.39■■□□□ 1.01
PCF11-207ENST00000624931 KAZALD1Q96I82 304 aa21.39■■□□□ 1.01
PCF11-207ENST00000624931 BCL11BQ9C0K0 894 aaPredicted RBP21.39■■□□□ 1.01
PCF11-207ENST00000624931 APBB1O00213 710 aa21.38■■□□□ 1.01
PCF11-207ENST00000624931 TRIM37O94972 964 aa21.38■■□□□ 1.01
PCF11-207ENST00000624931 REC8O95072 547 aa21.38■■□□□ 1.01
PCF11-207ENST00000624931 CYP2E1P05181 493 aaPredicted RBP21.38■■□□□ 1.01
PCF11-207ENST00000624931 EIF5P55010 431 aaKnown RBP21.38■■□□□ 1.01
PCF11-207ENST00000624931 PPP1R42Q7Z4L9 355 aa21.38■■□□□ 1.01
PCF11-207ENST00000624931 CCNL1Q9UK58 526 aaPredicted RBP21.38■■□□□ 1.01
PCF11-207ENST00000624931 UBE3BQ7Z3V4 1068 aa21.38■■□□□ 1.01
PCF11-207ENST00000624931 DZIP3Q86Y13 1208 aaKnown RBP21.38■■□□□ 1.01
PCF11-207ENST00000624931 ANKRD36CQ5JPF3 1778 aa21.38■■□□□ 1.01
PCF11-207ENST00000624931 TAF1LQ8IZX4 1826 aa21.37■■□□□ 1.01
PCF11-207ENST00000624931 HMMRO75330 724 aa21.37■■□□□ 1.01
PCF11-207ENST00000624931 TERF1P54274 439 aa21.37■■□□□ 1.01
PCF11-207ENST00000624931 ZSCAN30Q86W11 494 aa21.37■■□□□ 1.01
PCF11-207ENST00000624931 NUP98P52948 1817 aa21.36■■□□□ 1.01
PCF11-207ENST00000624931 A0A087WZG4 1122 aa21.36■■□□□ 1.01
PCF11-207ENST00000624931 EPHA10Q5JZY3 1008 aa21.36■■□□□ 1.01
PCF11-207ENST00000624931 BICC1Q9H694 974 aaKnown RBP21.36■■□□□ 1.01
PCF11-207ENST00000624931 EXOC6BQ9Y2D4 811 aa21.36■■□□□ 1.01
PCF11-207ENST00000624931 TCIRG1Q13488 830 aa21.35■■□□□ 1.01
PCF11-207ENST00000624931 ISCA1Q9BUE6 129 aa21.35■■□□□ 1.01
PCF11-207ENST00000624931 CWC25Q9NXE8 425 aaPredicted RBP21.35■■□□□ 1.01
PCF11-207ENST00000624931 COL15A1P39059 1388 aa21.35■■□□□ 1.01
PCF11-207ENST00000624931 GPTP24298 496 aa21.35■■□□□ 1.01
PCF11-207ENST00000624931 CASP7P55210 303 aa21.35■■□□□ 1.01
PCF11-207ENST00000624931 HSP90AA2PQ14568 343 aaPredicted RBP21.35■■□□□ 1.01
PCF11-207ENST00000624931 SRGAP3O43295 1099 aa21.34■■□□□ 1.01
PCF11-207ENST00000624931 SMARCA5O60264 1052 aaPredicted RBP21.34■■□□□ 1.01
PCF11-207ENST00000624931 MCM2P49736 904 aa21.34■■□□□ 1.01
PCF11-207ENST00000624931 POLA2Q14181 598 aa21.34■■□□□ 1.01
PCF11-207ENST00000624931 GIGYF2Q6Y7W6 1299 aaKnown RBP21.34■■□□□ 1.01
PCF11-207ENST00000624931 FOXD4L1Q9NU39 408 aa21.34■■□□□ 1.01
PCF11-207ENST00000624931 CNTNAP4Q9C0A0 1308 aa21.34■■□□□ 1.01
PCF11-207ENST00000624931 SSH3Q8TE77 659 aa21.33■■□□□ 1.01
PCF11-207ENST00000624931 BCORQ6W2J9 1755 aa21.33■■□□□ 1
PCF11-207ENST00000624931 AMIGO3Q86WK7 504 aa21.32■■□□□ 1
PCF11-207ENST00000624931 EP400Q96L91 3159 aa21.32■■□□□ 1
PCF11-207ENST00000624931 C4BP0C0L5 1744 aa21.32■■□□□ 1
PCF11-207ENST00000624931 CCDC191Q8NCU4 936 aa21.32■■□□□ 1
PCF11-207ENST00000624931 OSBPL3Q9H4L5 887 aa21.32■■□□□ 1
PCF11-207ENST00000624931 LRRC4BQ9NT99 713 aa21.32■■□□□ 1
PCF11-207ENST00000624931 H7C1W4 665 aa21.31■■□□□ 1
PCF11-207ENST00000624931 CAMTA2O94983 1202 aa21.31■■□□□ 1
PCF11-207ENST00000624931 LMBRD1Q9NUN5 540 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms