RNA–Protein interactions for RNA: ENST00000624688.2

C3orf56-201, Transcript of chromosome 3 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf56, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56-201ENST00000624688 KIF6Q6ZMV9 814 aa16.18■□□□□ 0.18
C3orf56-201ENST00000624688 ACSBG1Q96GR2 724 aa16.18■□□□□ 0.18
C3orf56-201ENST00000624688 C8orf37Q96NL8 207 aa16.18■□□□□ 0.18
C3orf56-201ENST00000624688 ECHDC1Q9NTX5 307 aa16.18■□□□□ 0.18
C3orf56-201ENST00000624688 KAT6BQ8WYB5 2073 aa16.18■□□□□ 0.18
C3orf56-201ENST00000624688 GLRX3O76003 335 aaKnown RBP16.17■□□□□ 0.18
C3orf56-201ENST00000624688 TRIM28Q13263 835 aaKnown RBP16.17■□□□□ 0.18
C3orf56-201ENST00000624688 VPS72Q15906 364 aa16.17■□□□□ 0.18
C3orf56-201ENST00000624688 RTL5Q5HYW3 569 aaPredicted RBP16.17■□□□□ 0.18
C3orf56-201ENST00000624688 ZBTB1Q9Y2K1 713 aa16.17■□□□□ 0.18
C3orf56-201ENST00000624688 CICQ96RK0 1608 aaPredicted RBP16.17■□□□□ 0.18
C3orf56-201ENST00000624688 HSCBQ8IWL3 235 aa16.16■□□□□ 0.18
C3orf56-201ENST00000624688 NGLY1Q96IV0 654 aa16.16■□□□□ 0.18
C3orf56-201ENST00000624688 CD2BP2O95400 341 aaKnown RBP16.16■□□□□ 0.18
C3orf56-201ENST00000624688 HLFQ16534 295 aa16.16■□□□□ 0.18
C3orf56-201ENST00000624688 GIGYF2Q6Y7W6 1299 aaKnown RBP16.16■□□□□ 0.18
C3orf56-201ENST00000624688 FNBP4Q8N3X1 1017 aaPredicted RBP16.16■□□□□ 0.18
C3orf56-201ENST00000624688 CCDC8Q9H0W5 538 aaPredicted RBP16.16■□□□□ 0.18
C3orf56-201ENST00000624688 TLR7Q9NYK1 1049 aaKnown RBP16.16■□□□□ 0.18
C3orf56-201ENST00000624688 ANKRD36CQ5JPF3 1778 aa16.16■□□□□ 0.18
C3orf56-201ENST00000624688 RREB1Q92766 1687 aa16.15■□□□□ 0.18
C3orf56-201ENST00000624688 FAM98CQ17RN3 349 aaKnown RBP16.15■□□□□ 0.18
C3orf56-201ENST00000624688 CNTROBQ8N137 903 aa16.15■□□□□ 0.18
C3orf56-201ENST00000624688 IL25Q9H293 177 aa16.15■□□□□ 0.18
C3orf56-201ENST00000624688 SLKQ9H2G2 1235 aaPredicted RBP16.15■□□□□ 0.18
C3orf56-201ENST00000624688 GPATCH3Q96I76 525 aa16.14■□□□□ 0.17
C3orf56-201ENST00000624688 IL6STP40189 918 aaPredicted RBP16.14■□□□□ 0.17
C3orf56-201ENST00000624688 TFCP2Q12800 502 aa16.14■□□□□ 0.17
C3orf56-201ENST00000624688 RABEP1Q15276 862 aa16.14■□□□□ 0.17
C3orf56-201ENST00000624688 INTS5Q6P9B9 1019 aaKnown RBP16.14■□□□□ 0.17
C3orf56-201ENST00000624688 SPATA31A6Q5VVP1 1343 aa16.13■□□□□ 0.17
C3orf56-201ENST00000624688 PCCAP05165 728 aaPredicted RBP16.13■□□□□ 0.17
C3orf56-201ENST00000624688 SPRYD3Q8NCJ5 442 aa16.13■□□□□ 0.17
C3orf56-201ENST00000624688 NUP98P52948 1817 aa16.13■□□□□ 0.17
C3orf56-201ENST00000624688 KCNQ2O43526 872 aa16.12■□□□□ 0.17
C3orf56-201ENST00000624688 TNNI3KQ59H18 835 aa16.12■□□□□ 0.17
C3orf56-201ENST00000624688 ATG9AQ7Z3C6 839 aa16.12■□□□□ 0.17
C3orf56-201ENST00000624688 CHMP3Q9Y3E7 222 aa16.12■□□□□ 0.17
C3orf56-201ENST00000624688 FPGT-TNNI3KV9GXZ4 949 aa16.12■□□□□ 0.17
C3orf56-201ENST00000624688 PALLDQ8WX93 1383 aa16.11■□□□□ 0.17
C3orf56-201ENST00000624688 LOC102724428A0A0B4J2F2 783 aa16.11■□□□□ 0.17
C3orf56-201ENST00000624688 A0A0G2JS52 829 aa16.11■□□□□ 0.17
C3orf56-201ENST00000624688 ERVV-1B6SEH8 477 aa16.11■□□□□ 0.17
C3orf56-201ENST00000624688 ATP6V1AP38606 617 aa16.11■□□□□ 0.17
C3orf56-201ENST00000624688 SIK1P57059 783 aa16.11■□□□□ 0.17
C3orf56-201ENST00000624688 ITPK1Q13572 414 aa16.11■□□□□ 0.17
C3orf56-201ENST00000624688 NFKBIBQ15653 356 aa16.11■□□□□ 0.17
C3orf56-201ENST00000624688 NLRP10Q86W26 655 aa16.11■□□□□ 0.17
C3orf56-201ENST00000624688 ZBTB38Q8NAP3 1195 aaPredicted RBP16.11■□□□□ 0.17
C3orf56-201ENST00000624688 CERKQ8TCT0 537 aa16.11■□□□□ 0.17
C3orf56-201ENST00000624688 ARXQ96QS3 562 aa16.11■□□□□ 0.17
C3orf56-201ENST00000624688 PLA2G12BQ9BX93 195 aa16.11■□□□□ 0.17
C3orf56-201ENST00000624688 THSD7AQ9UPZ6 1657 aa16.11■□□□□ 0.17
C3orf56-201ENST00000624688 SGSM2O43147 1006 aa16.11■□□□□ 0.17
C3orf56-201ENST00000624688 EIF5P55010 431 aaKnown RBP16.11■□□□□ 0.17
C3orf56-201ENST00000624688 DZIP3Q86Y13 1208 aaKnown RBP16.11■□□□□ 0.17
C3orf56-201ENST00000624688 FAM89AQ96GI7 184 aa16.11■□□□□ 0.17
C3orf56-201ENST00000624688 CCDC87Q9NVE4 849 aa16.11■□□□□ 0.17
C3orf56-201ENST00000624688 DBNLQ9UJU6 430 aaKnown RBP16.11■□□□□ 0.17
C3orf56-201ENST00000624688 CRKLP46109 303 aaKnown RBP16.1■□□□□ 0.17
C3orf56-201ENST00000624688 HSP90AB3PQ58FF7 597 aa16.1■□□□□ 0.17
C3orf56-201ENST00000624688 EVI5LQ96CN4 794 aa16.1■□□□□ 0.17
C3orf56-201ENST00000624688 ANO2Q9NQ90 1003 aa16.1■□□□□ 0.17
C3orf56-201ENST00000624688 TBC1D2BQ9UPU7 963 aa16.1■□□□□ 0.17
C3orf56-201ENST00000624688 ZNF831Q5JPB2 1677 aa16.1■□□□□ 0.17
C3orf56-201ENST00000624688 CDHR2Q9BYE9 1310 aa16.1■□□□□ 0.17
C3orf56-201ENST00000624688 COL5A3P25940 1745 aaPredicted RBP16.09■□□□□ 0.17
C3orf56-201ENST00000624688 K7ELQ4 463 aaPredicted RBP16.09■□□□□ 0.17
C3orf56-201ENST00000624688 EPB41L2O43491 1005 aaKnown RBP16.09■□□□□ 0.17
C3orf56-201ENST00000624688 GPTP24298 496 aa16.09■□□□□ 0.17
C3orf56-201ENST00000624688 DDIT3P35638 169 aa16.09■□□□□ 0.17
C3orf56-201ENST00000624688 SYNE4Q8N205 404 aa16.09■□□□□ 0.17
C3orf56-201ENST00000624688 IL17RAQ96F46 866 aa16.09■□□□□ 0.17
C3orf56-201ENST00000624688 ZNF594Q96JF6 807 aaPredicted RBP16.09■□□□□ 0.17
C3orf56-201ENST00000624688 USP21Q9UK80 565 aa16.09■□□□□ 0.17
C3orf56-201ENST00000624688 MYH14Q7Z406 1995 aaKnown RBP16.09■□□□□ 0.17
C3orf56-201ENST00000624688 CSF1RP07333 972 aa16.08■□□□□ 0.17
C3orf56-201ENST00000624688 SMARCC1Q92922 1105 aaPredicted RBP16.08■□□□□ 0.17
C3orf56-201ENST00000624688 EYA2O00167 538 aa16.08■□□□□ 0.16
C3orf56-201ENST00000624688 CIAO1O76071 339 aa16.08■□□□□ 0.16
C3orf56-201ENST00000624688 LRRC24Q50LG9 513 aa16.08■□□□□ 0.16
C3orf56-201ENST00000624688 ZNF34Q8IZ26 560 aa16.08■□□□□ 0.16
C3orf56-201ENST00000624688 BOLA2Q9H3K6 86 aa16.08■□□□□ 0.16
C3orf56-201ENST00000624688 PALD1Q9ULE6 856 aa16.08■□□□□ 0.16
C3orf56-201ENST00000624688 UBN2Q6ZU65 1347 aa16.07■□□□□ 0.16
C3orf56-201ENST00000624688 ATP5JP18859 108 aa16.07■□□□□ 0.16
C3orf56-201ENST00000624688 IL15P40933 162 aaPredicted RBP16.07■□□□□ 0.16
C3orf56-201ENST00000624688 CWC27Q6UX04 472 aaKnown RBP16.07■□□□□ 0.16
C3orf56-201ENST00000624688 DBNDD2Q9BQY9 259 aa16.07■□□□□ 0.16
C3orf56-201ENST00000624688 PUS3Q9BZE2 481 aaKnown RBP16.07■□□□□ 0.16
C3orf56-201ENST00000624688 LSG1Q9H089 658 aaKnown RBP16.07■□□□□ 0.16
C3orf56-201ENST00000624688 GPR108Q9NPR9 543 aa16.07■□□□□ 0.16
C3orf56-201ENST00000624688 DIAPH3Q9NSV4 1193 aa16.06■□□□□ 0.16
C3orf56-201ENST00000624688 RAD50Q92878 1312 aa16.06■□□□□ 0.16
C3orf56-201ENST00000624688 MCCP23508 829 aa16.05■□□□□ 0.16
C3orf56-201ENST00000624688 HSPA4P34932 840 aa16.05■□□□□ 0.16
C3orf56-201ENST00000624688 ANAPC15P60006 121 aa16.05■□□□□ 0.16
C3orf56-201ENST00000624688 ZNF609O15014 1411 aa16.05■□□□□ 0.16
C3orf56-201ENST00000624688 MYH3P11055 1940 aa16.05■□□□□ 0.16
C3orf56-201ENST00000624688 FRAT2O75474 233 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms