RNA–Protein interactions for RNA: ENST00000622698.4

PCDH11Y-207, Transcript of protocadherin 11 Y-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11Y, Length 4,824 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11Y-207ENST00000622698 MED1Q15648 1581 aaPredicted RBP13.18□□□□□ -0.3
PCDH11Y-207ENST00000622698 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.18□□□□□ -0.3
PCDH11Y-207ENST00000622698 RALYLQ86SE5 291 aaKnown RBP13.18□□□□□ -0.3
PCDH11Y-207ENST00000622698 PCCAP05165 728 aaPredicted RBP13.17□□□□□ -0.3
PCDH11Y-207ENST00000622698 PLCG2P16885 1265 aa13.17□□□□□ -0.3
PCDH11Y-207ENST00000622698 CNTNAP4Q9C0A0 1308 aa13.17□□□□□ -0.3
PCDH11Y-207ENST00000622698 COL14A1Q05707 1796 aaKnown RBP13.17□□□□□ -0.3
PCDH11Y-207ENST00000622698 ST18O60284 1047 aa13.16□□□□□ -0.3
PCDH11Y-207ENST00000622698 LRRFIP2Q9Y608 721 aaKnown RBP13.16□□□□□ -0.3
PCDH11Y-207ENST00000622698 GNL2Q13823 731 aaKnown RBP13.16□□□□□ -0.3
PCDH11Y-207ENST00000622698 GPR162Q16538 588 aa13.16□□□□□ -0.3
PCDH11Y-207ENST00000622698 SIL1Q9H173 461 aa13.16□□□□□ -0.3
PCDH11Y-207ENST00000622698 ATG3Q9NT62 314 aa13.16□□□□□ -0.3
PCDH11Y-207ENST00000622698 CDC45O75419 566 aa13.16□□□□□ -0.3
PCDH11Y-207ENST00000622698 TRIM27P14373 513 aa13.16□□□□□ -0.3
PCDH11Y-207ENST00000622698 PSMA5P28066 241 aa13.16□□□□□ -0.3
PCDH11Y-207ENST00000622698 ROBO1Q9Y6N7 1651 aa13.16□□□□□ -0.3
PCDH11Y-207ENST00000622698 C2CD5Q86YS7 1000 aa13.16□□□□□ -0.3
PCDH11Y-207ENST00000622698 CCDC34Q96HJ3 373 aa13.16□□□□□ -0.3
PCDH11Y-207ENST00000622698 ANP32EQ9BTT0 268 aa13.16□□□□□ -0.3
PCDH11Y-207ENST00000622698 GGA1Q9UJY5 639 aa13.16□□□□□ -0.3
PCDH11Y-207ENST00000622698 BBOX1O75936 387 aa13.15□□□□□ -0.3
PCDH11Y-207ENST00000622698 MARCH10Q8NA82 808 aaPredicted RBP13.15□□□□□ -0.3
PCDH11Y-207ENST00000622698 F6X3S4 739 aa13.15□□□□□ -0.3
PCDH11Y-207ENST00000622698 DPY19L2Q6NUT2 758 aa13.15□□□□□ -0.3
PCDH11Y-207ENST00000622698 DNAJC2Q99543 621 aaKnown RBP13.15□□□□□ -0.3
PCDH11Y-207ENST00000622698 PLSCR1O15162 318 aa13.15□□□□□ -0.3
PCDH11Y-207ENST00000622698 ZFYP08048 801 aaPredicted RBP13.15□□□□□ -0.3
PCDH11Y-207ENST00000622698 ATP2B4P23634 1241 aa13.14□□□□□ -0.31
PCDH11Y-207ENST00000622698 LMBR1LQ6UX01 489 aa13.14□□□□□ -0.31
PCDH11Y-207ENST00000622698 ZBTB38Q8NAP3 1195 aaPredicted RBP13.14□□□□□ -0.31
PCDH11Y-207ENST00000622698 MROH5Q6ZUA9 1318 aa13.14□□□□□ -0.31
PCDH11Y-207ENST00000622698 SLIT3O75094 1523 aa13.14□□□□□ -0.31
PCDH11Y-207ENST00000622698 TNNI2P48788 182 aa13.14□□□□□ -0.31
PCDH11Y-207ENST00000622698 ATP8B2P98198 1209 aa13.14□□□□□ -0.31
PCDH11Y-207ENST00000622698 ATP2B3Q16720 1220 aa13.14□□□□□ -0.31
PCDH11Y-207ENST00000622698 USPL1Q5W0Q7 1092 aa13.14□□□□□ -0.31
PCDH11Y-207ENST00000622698 SERPINB2P05120 415 aa13.14□□□□□ -0.31
PCDH11Y-207ENST00000622698 NIM1KQ8IY84 436 aa13.14□□□□□ -0.31
PCDH11Y-207ENST00000622698 BRPF1P55201 1214 aaPredicted RBP13.13□□□□□ -0.31
PCDH11Y-207ENST00000622698 DPP8Q6V1X1 898 aaPredicted RBP13.13□□□□□ -0.31
PCDH11Y-207ENST00000622698 TBC1D22AQ8WUA7 517 aa13.13□□□□□ -0.31
PCDH11Y-207ENST00000622698 CARMIL3Q8ND23 1372 aa13.13□□□□□ -0.31
PCDH11Y-207ENST00000622698 NPR1P16066 1061 aa13.13□□□□□ -0.31
PCDH11Y-207ENST00000622698 RGS12O14924 1447 aa13.13□□□□□ -0.31
PCDH11Y-207ENST00000622698 RTKN2Q8IZC4 609 aa13.13□□□□□ -0.31
PCDH11Y-207ENST00000622698 CHAF1AQ13111 956 aaPredicted RBP13.13□□□□□ -0.31
PCDH11Y-207ENST00000622698 GRIN3BO60391 1043 aa13.12□□□□□ -0.31
PCDH11Y-207ENST00000622698 ZRSR1Q15695 479 aaKnown RBP13.12□□□□□ -0.31
PCDH11Y-207ENST00000622698 ANXA1P04083 346 aa13.12□□□□□ -0.31
PCDH11Y-207ENST00000622698 ZNF853P0CG23 659 aa13.12□□□□□ -0.31
PCDH11Y-207ENST00000622698 DENND2AQ9ULE3 1009 aa13.12□□□□□ -0.31
PCDH11Y-207ENST00000622698 ZBTB1Q9Y2K1 713 aa13.12□□□□□ -0.31
PCDH11Y-207ENST00000622698 COL15A1P39059 1388 aa13.12□□□□□ -0.31
PCDH11Y-207ENST00000622698 EN1Q05925 392 aaPredicted RBP13.12□□□□□ -0.31
PCDH11Y-207ENST00000622698 NALCNQ8IZF0 1738 aa13.12□□□□□ -0.31
PCDH11Y-207ENST00000622698 HLA-DOAP06340 250 aa13.11□□□□□ -0.31
PCDH11Y-207ENST00000622698 GCKRQ14397 625 aa13.11□□□□□ -0.31
PCDH11Y-207ENST00000622698 MPNDQ8N594 471 aa13.11□□□□□ -0.31
PCDH11Y-207ENST00000622698 LNPKQ9C0E8 428 aa13.11□□□□□ -0.31
PCDH11Y-207ENST00000622698 USP16Q9Y5T5 823 aa13.11□□□□□ -0.31
PCDH11Y-207ENST00000622698 CCDC178Q5BJE1 867 aa13.11□□□□□ -0.31
PCDH11Y-207ENST00000622698 CCAR1Q8IX12 1150 aaKnown RBP13.11□□□□□ -0.31
PCDH11Y-207ENST00000622698 CCDC85AQ96PX6 553 aaPredicted RBP13.11□□□□□ -0.31
PCDH11Y-207ENST00000622698 TMED8Q6PL24 325 aaPredicted RBP13.11□□□□□ -0.31
PCDH11Y-207ENST00000622698 AIDAQ96BJ3 306 aa13.11□□□□□ -0.31
PCDH11Y-207ENST00000622698 NSFL1CQ9UNZ2 370 aaKnown RBP13.11□□□□□ -0.31
PCDH11Y-207ENST00000622698 RPS8P62241 208 aaKnown RBP13.1□□□□□ -0.31
PCDH11Y-207ENST00000622698 FKBP4Q02790 459 aaKnown RBP eCLIP13.1□□□□□ -0.31
PCDH11Y-207ENST00000622698 CCDC93Q567U6 631 aa13.1□□□□□ -0.31
PCDH11Y-207ENST00000622698 DALRD3Q5D0E6 543 aaKnown RBP13.1□□□□□ -0.31
PCDH11Y-207ENST00000622698 ZSCAN29Q8IWY8 852 aaPredicted RBP13.1□□□□□ -0.31
PCDH11Y-207ENST00000622698 ANKRD44Q8N8A2 993 aa13.1□□□□□ -0.31
PCDH11Y-207ENST00000622698 KRT32Q14532 448 aa13.1□□□□□ -0.31
PCDH11Y-207ENST00000622698 CHD1LQ86WJ1 897 aa13.1□□□□□ -0.31
PCDH11Y-207ENST00000622698 LARGE2Q8N3Y3 721 aa13.1□□□□□ -0.31
PCDH11Y-207ENST00000622698 MASTLQ96GX5 879 aa13.1□□□□□ -0.31
PCDH11Y-207ENST00000622698 CYP19A1P11511 503 aaPredicted RBP13.1□□□□□ -0.31
PCDH11Y-207ENST00000622698 TNIP1Q15025 636 aa13.1□□□□□ -0.31
PCDH11Y-207ENST00000622698 ECHDC1Q9NTX5 307 aa13.1□□□□□ -0.31
PCDH11Y-207ENST00000622698 PIM2Q9P1W9 311 aa13.1□□□□□ -0.31
PCDH11Y-207ENST00000622698 NRKQ7Z2Y5 1582 aa13.1□□□□□ -0.31
PCDH11Y-207ENST00000622698 SLC15A2Q16348 729 aa13.09□□□□□ -0.31
PCDH11Y-207ENST00000622698 FAM161AQ3B820 660 aa13.09□□□□□ -0.31
PCDH11Y-207ENST00000622698 ILDR1Q86SU0 546 aaPredicted RBP13.09□□□□□ -0.31
PCDH11Y-207ENST00000622698 WDR66Q8TBY9 1149 aa13.09□□□□□ -0.31
PCDH11Y-207ENST00000622698 RNF41Q9H4P4 317 aaPredicted RBP13.09□□□□□ -0.31
PCDH11Y-207ENST00000622698 ZNF219Q9P2Y4 722 aaPredicted RBP13.09□□□□□ -0.31
PCDH11Y-207ENST00000622698 ABCF2Q9UG63 623 aa13.09□□□□□ -0.31
PCDH11Y-207ENST00000622698 IGSF3O75054 1194 aa13.09□□□□□ -0.31
PCDH11Y-207ENST00000622698 PUM3Q15397 648 aaKnown RBP13.09□□□□□ -0.31
PCDH11Y-207ENST00000622698 LEMD3Q9Y2U8 911 aa13.09□□□□□ -0.31
PCDH11Y-207ENST00000622698 EYA2O00167 538 aa13.09□□□□□ -0.31
PCDH11Y-207ENST00000622698 USP5P45974 858 aa13.09□□□□□ -0.31
PCDH11Y-207ENST00000622698 CTSWP56202 376 aa13.08□□□□□ -0.32
PCDH11Y-207ENST00000622698 NEURL1BA8MQ27 555 aa13.08□□□□□ -0.32
PCDH11Y-207ENST00000622698 MX1P20591 662 aa13.08□□□□□ -0.32
PCDH11Y-207ENST00000622698 TSPYL6Q8N831 410 aa13.08□□□□□ -0.32
PCDH11Y-207ENST00000622698 TTLL6Q8N841 843 aa13.08□□□□□ -0.32
PCDH11Y-207ENST00000622698 IDH1O75874 414 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms