RNA–Protein interactions for RNA: ENST00000621453.4

FMR1-219, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 1,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-219ENST00000621453 PTPN12Q05209 780 aaKnown RBP34.07■■■■□ 3.04
FMR1-219ENST00000621453 RTL5Q5HYW3 569 aaPredicted RBP34.06■■■■□ 3.04
FMR1-219ENST00000621453 LMBR1LQ6UX01 489 aa34.06■■■■□ 3.04
FMR1-219ENST00000621453 LOC102724428A0A0B4J2F2 783 aa34.05■■■■□ 3.04
FMR1-219ENST00000621453 IFIT2P09913 472 aaKnown RBP34.05■■■■□ 3.04
FMR1-219ENST00000621453 HSPA1LP34931 641 aa34.05■■■■□ 3.04
FMR1-219ENST00000621453 ATP6V1AP38606 617 aa34.05■■■■□ 3.04
FMR1-219ENST00000621453 SIK1P57059 783 aa34.05■■■■□ 3.04
FMR1-219ENST00000621453 PALLDQ8WX93 1383 aa34.05■■■■□ 3.04
FMR1-219ENST00000621453 ANKRD36CQ5JPF3 1778 aa34.05■■■■□ 3.04
FMR1-219ENST00000621453 SMARCC1Q92922 1105 aaPredicted RBP34.04■■■■□ 3.04
FMR1-219ENST00000621453 KCNQ2O43526 872 aa34.03■■■■□ 3.04
FMR1-219ENST00000621453 AACSQ86V21 672 aa34.03■■■■□ 3.04
FMR1-219ENST00000621453 THSD7AQ9UPZ6 1657 aa34.03■■■■□ 3.04
FMR1-219ENST00000621453 HSP90AB3PQ58FF7 597 aa34.03■■■■□ 3.04
FMR1-219ENST00000621453 MEX3CQ5U5Q3 659 aaKnown RBP34.03■■■■□ 3.04
FMR1-219ENST00000621453 GPATCH3Q96I76 525 aa34.03■■■■□ 3.04
FMR1-219ENST00000621453 ERC2O15083 957 aa34.02■■■■□ 3.04
FMR1-219ENST00000621453 MYT1Q01538 1121 aa34.02■■■■□ 3.04
FMR1-219ENST00000621453 HLFQ16534 295 aa34.02■■■■□ 3.04
FMR1-219ENST00000621453 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP34.02■■■■□ 3.04
FMR1-219ENST00000621453 NUP98P52948 1817 aa34.01■■■■□ 3.04
FMR1-219ENST00000621453 GLRX3O76003 335 aaKnown RBP34.01■■■■□ 3.04
FMR1-219ENST00000621453 USP26Q9BXU7 913 aa34.01■■■■□ 3.04
FMR1-219ENST00000621453 TBC1D2Q9BYX2 928 aa34.01■■■■□ 3.04
FMR1-219ENST00000621453 RREB1Q92766 1687 aa34.01■■■■□ 3.03
FMR1-219ENST00000621453 REC8O95072 547 aa34.01■■■■□ 3.03
FMR1-219ENST00000621453 EAF2Q96CJ1 260 aaPredicted RBP34.01■■■■□ 3.03
FMR1-219ENST00000621453 ECHDC1Q9NTX5 307 aa34.01■■■■□ 3.03
FMR1-219ENST00000621453 CHMP3Q9Y3E7 222 aa34.01■■■■□ 3.03
FMR1-219ENST00000621453 CCDC87Q9NVE4 849 aa34■■■■□ 3.03
FMR1-219ENST00000621453 CHMLP26374 656 aa33.99■■■■□ 3.03
FMR1-219ENST00000621453 DZIP3Q86Y13 1208 aaKnown RBP33.99■■■■□ 3.03
FMR1-219ENST00000621453 ERVV-1B6SEH8 477 aa33.99■■■■□ 3.03
FMR1-219ENST00000621453 PCCAP05165 728 aaPredicted RBP33.99■■■■□ 3.03
FMR1-219ENST00000621453 INTS5Q6P9B9 1019 aaKnown RBP33.99■■■■□ 3.03
FMR1-219ENST00000621453 KIF2CQ99661 725 aa33.99■■■■□ 3.03
FMR1-219ENST00000621453 CRKLP46109 303 aaKnown RBP33.98■■■■□ 3.03
FMR1-219ENST00000621453 CNTROBQ8N137 903 aa33.98■■■■□ 3.03
FMR1-219ENST00000621453 EIF5P55010 431 aaKnown RBP33.97■■■■□ 3.03
FMR1-219ENST00000621453 ITPK1Q13572 414 aa33.97■■■■□ 3.03
FMR1-219ENST00000621453 ZBTB38Q8NAP3 1195 aaPredicted RBP33.97■■■■□ 3.03
FMR1-219ENST00000621453 ESYT1Q9BSJ8 1104 aa33.97■■■■□ 3.03
FMR1-219ENST00000621453 ZNF831Q5JPB2 1677 aa33.96■■■■□ 3.03
FMR1-219ENST00000621453 MAP4K4O95819 1239 aaPredicted RBP33.96■■■■□ 3.03
FMR1-219ENST00000621453 CCDC8Q9H0W5 538 aaPredicted RBP33.95■■■■□ 3.03
FMR1-219ENST00000621453 TBC1D2BQ9UPU7 963 aa33.95■■■■□ 3.03
FMR1-219ENST00000621453 MYH14Q7Z406 1995 aaKnown RBP33.95■■■■□ 3.03
FMR1-219ENST00000621453 NLRP10Q86W26 655 aa33.95■■■■□ 3.02
FMR1-219ENST00000621453 COL5A3P25940 1745 aaPredicted RBP33.94■■■■□ 3.02
FMR1-219ENST00000621453 GPTP24298 496 aa33.94■■■■□ 3.02
FMR1-219ENST00000621453 PLA2G12BQ9BX93 195 aa33.94■■■■□ 3.02
FMR1-219ENST00000621453 AFF2P51816 1311 aa33.93■■■■□ 3.02
FMR1-219ENST00000621453 FAM89AQ96GI7 184 aa33.93■■■■□ 3.02
FMR1-219ENST00000621453 GJD4Q96KN9 370 aaPredicted RBP33.93■■■■□ 3.02
FMR1-219ENST00000621453 TFCP2Q12800 502 aa33.93■■■■□ 3.02
FMR1-219ENST00000621453 CDHR2Q9BYE9 1310 aa33.91■■■■□ 3.02
FMR1-219ENST00000621453 TLR7Q9NYK1 1049 aaKnown RBP33.91■■■■□ 3.02
FMR1-219ENST00000621453 TNNI3KQ59H18 835 aa33.9■■■■□ 3.02
FMR1-219ENST00000621453 SNX21Q969T3 373 aa33.9■■■■□ 3.02
FMR1-219ENST00000621453 FPGT-TNNI3KV9GXZ4 949 aa33.9■■■■□ 3.02
FMR1-219ENST00000621453 HSCBQ8IWL3 235 aa33.9■■■■□ 3.02
FMR1-219ENST00000621453 NHSQ6T4R5 1651 aa33.88■■■■□ 3.01
FMR1-219ENST00000621453 ATG9AQ7Z3C6 839 aa33.87■■■■□ 3.01
FMR1-219ENST00000621453 ZNF34Q8IZ26 560 aa33.87■■■■□ 3.01
FMR1-219ENST00000621453 BTAF1O14981 1849 aa33.86■■■■□ 3.01
FMR1-219ENST00000621453 MYH3P11055 1940 aa33.86■■■■□ 3.01
FMR1-219ENST00000621453 ATRNO75882 1429 aa33.86■■■■□ 3.01
FMR1-219ENST00000621453 CSF1RP07333 972 aa33.86■■■■□ 3.01
FMR1-219ENST00000621453 IL15P40933 162 aaPredicted RBP33.86■■■■□ 3.01
FMR1-219ENST00000621453 CCDC57Q2TAC2 916 aa33.86■■■■□ 3.01
FMR1-219ENST00000621453 EVI5LQ96CN4 794 aa33.85■■■■□ 3.01
FMR1-219ENST00000621453 EYA2O00167 538 aa33.84■■■■□ 3.01
FMR1-219ENST00000621453 ZNF594Q96JF6 807 aaPredicted RBP33.84■■■■□ 3.01
FMR1-219ENST00000621453 TRMT112Q9UI30 125 aaKnown RBP33.84■■■■□ 3.01
FMR1-219ENST00000621453 TRPC5Q9UL62 973 aaPredicted RBP33.84■■■■□ 3.01
FMR1-219ENST00000621453 UBN2Q6ZU65 1347 aa33.84■■■■□ 3.01
FMR1-219ENST00000621453 CIAO1O76071 339 aa33.84■■■■□ 3.01
FMR1-219ENST00000621453 SYNE4Q8N205 404 aa33.84■■■■□ 3.01
FMR1-219ENST00000621453 DBNLQ9UJU6 430 aaKnown RBP33.84■■■■□ 3.01
FMR1-219ENST00000621453 RABEP1Q15276 862 aa33.82■■■■□ 3.01
FMR1-219ENST00000621453 PTF1AQ7RTS3 328 aa33.82■■■■□ 3.01
FMR1-219ENST00000621453 ANO2Q9NQ90 1003 aa33.82■■■■□ 3.01
FMR1-219ENST00000621453 CAMTA2O94983 1202 aa33.82■■■■□ 3
FMR1-219ENST00000621453 LRRC24Q50LG9 513 aa33.82■■■■□ 3
FMR1-219ENST00000621453 GPR108Q9NPR9 543 aa33.82■■■■□ 3
FMR1-219ENST00000621453 ONECUT3O60422 494 aaPredicted RBP33.81■■■■□ 3
FMR1-219ENST00000621453 LINC00116Q8NCU8 138 aa33.81■■■■□ 3
FMR1-219ENST00000621453 FBXO3Q9UK99 471 aa33.81■■■■□ 3
FMR1-219ENST00000621453 IRS4O14654 1257 aaPredicted RBP33.8■■■■□ 3
FMR1-219ENST00000621453 EPB41L2O43491 1005 aaKnown RBP33.8■■■■□ 3
FMR1-219ENST00000621453 IL25Q9H293 177 aa33.8■■■■□ 3
FMR1-219ENST00000621453 BOLA2Q9H3K6 86 aa33.8■■■■□ 3
FMR1-219ENST00000621453 SGSM2O43147 1006 aa33.8■■■■□ 3
FMR1-219ENST00000621453 IFIT5Q13325 482 aaKnown RBP33.79■■■■□ 3
FMR1-219ENST00000621453 FAM182BQ5T319 152 aa33.79■■■■□ 3
FMR1-219ENST00000621453 ATP5JP18859 108 aa33.78■■■■□ 3
FMR1-219ENST00000621453 SLKQ9H2G2 1235 aaPredicted RBP33.78■■■■□ 3
FMR1-219ENST00000621453 BCORQ6W2J9 1755 aa33.78■■■■□ 3
FMR1-219ENST00000621453 CTSWP56202 376 aa33.78■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms