RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 TRIM28Q13263 835 aaKnown RBP23.23■■□□□ 1.31
PSPC1-206ENST00000619300 SPRYD3Q8NCJ5 442 aa23.23■■□□□ 1.31
PSPC1-206ENST00000619300 MARCH10Q8NA82 808 aaPredicted RBP23.23■■□□□ 1.31
PSPC1-206ENST00000619300 CCDC8Q9H0W5 538 aaPredicted RBP23.21■■□□□ 1.31
PSPC1-206ENST00000619300 NWD2Q9ULI1 1742 aa23.2■■□□□ 1.31
PSPC1-206ENST00000619300 CD2BP2O95400 341 aaKnown RBP23.2■■□□□ 1.3
PSPC1-206ENST00000619300 MAP3K15Q6ZN16 1313 aa23.2■■□□□ 1.3
PSPC1-206ENST00000619300 ARXQ96QS3 562 aa23.19■■□□□ 1.3
PSPC1-206ENST00000619300 ANO2Q9NQ90 1003 aa23.19■■□□□ 1.3
PSPC1-206ENST00000619300 K7ELQ4 463 aaPredicted RBP23.18■■□□□ 1.3
PSPC1-206ENST00000619300 CHMP3Q9Y3E7 222 aa23.18■■□□□ 1.3
PSPC1-206ENST00000619300 KAT6BQ8WYB5 2073 aa23.18■■□□□ 1.3
PSPC1-206ENST00000619300 EPB41L2O43491 1005 aaKnown RBP23.18■■□□□ 1.3
PSPC1-206ENST00000619300 GIGYF2Q6Y7W6 1299 aaKnown RBP23.18■■□□□ 1.3
PSPC1-206ENST00000619300 ACSBG1Q96GR2 724 aa23.18■■□□□ 1.3
PSPC1-206ENST00000619300 JCADQ9P266 1359 aa23.17■■□□□ 1.3
PSPC1-206ENST00000619300 TFCP2Q12800 502 aa23.17■■□□□ 1.3
PSPC1-206ENST00000619300 NGLY1Q96IV0 654 aa23.17■■□□□ 1.3
PSPC1-206ENST00000619300 ZBTB1Q9Y2K1 713 aa23.17■■□□□ 1.3
PSPC1-206ENST00000619300 MCCP23508 829 aa23.16■■□□□ 1.3
PSPC1-206ENST00000619300 EVI5LQ96CN4 794 aa23.16■■□□□ 1.3
PSPC1-206ENST00000619300 TLR7Q9NYK1 1049 aaKnown RBP23.16■■□□□ 1.3
PSPC1-206ENST00000619300 SGSM2O43147 1006 aa23.16■■□□□ 1.3
PSPC1-206ENST00000619300 C8orf37Q96NL8 207 aa23.16■■□□□ 1.3
PSPC1-206ENST00000619300 DOT1LQ8TEK3 1739 aa23.15■■□□□ 1.3
PSPC1-206ENST00000619300 PCCAP05165 728 aaPredicted RBP23.15■■□□□ 1.3
PSPC1-206ENST00000619300 IL6STP40189 918 aaPredicted RBP23.15■■□□□ 1.3
PSPC1-206ENST00000619300 TNNI3KQ59H18 835 aa23.15■■□□□ 1.3
PSPC1-206ENST00000619300 IL25Q9H293 177 aa23.15■■□□□ 1.3
PSPC1-206ENST00000619300 CHMP5Q9NZZ3 219 aa23.15■■□□□ 1.3
PSPC1-206ENST00000619300 FPGT-TNNI3KV9GXZ4 949 aa23.15■■□□□ 1.3
PSPC1-206ENST00000619300 A0A0G2JS52 829 aa23.15■■□□□ 1.3
PSPC1-206ENST00000619300 VPS72Q15906 364 aa23.15■■□□□ 1.3
PSPC1-206ENST00000619300 HLFQ16534 295 aa23.15■■□□□ 1.3
PSPC1-206ENST00000619300 HSP90AB3PQ58FF7 597 aa23.15■■□□□ 1.3
PSPC1-206ENST00000619300 TJP1Q07157 1748 aa23.14■■□□□ 1.3
PSPC1-206ENST00000619300 ZBTB38Q8NAP3 1195 aaPredicted RBP23.14■■□□□ 1.29
PSPC1-206ENST00000619300 ANAPC15P60006 121 aa23.13■■□□□ 1.29
PSPC1-206ENST00000619300 FRAT2O75474 233 aaPredicted RBP23.13■■□□□ 1.29
PSPC1-206ENST00000619300 FAM98CQ17RN3 349 aaKnown RBP23.13■■□□□ 1.29
PSPC1-206ENST00000619300 DIAPH3Q9NSV4 1193 aa23.13■■□□□ 1.29
PSPC1-206ENST00000619300 ERVV-1B6SEH8 477 aa23.12■■□□□ 1.29
PSPC1-206ENST00000619300 ST18O60284 1047 aa23.12■■□□□ 1.29
PSPC1-206ENST00000619300 DDIT3P35638 169 aa23.12■■□□□ 1.29
PSPC1-206ENST00000619300 CWC27Q6UX04 472 aaKnown RBP23.12■■□□□ 1.29
PSPC1-206ENST00000619300 ATG9AQ7Z3C6 839 aa23.12■■□□□ 1.29
PSPC1-206ENST00000619300 BCL9LQ86UU0 1499 aa23.12■■□□□ 1.29
PSPC1-206ENST00000619300 RUFY2Q8WXA3 655 aa23.12■■□□□ 1.29
PSPC1-206ENST00000619300 PLA2G12BQ9BX93 195 aa23.12■■□□□ 1.29
PSPC1-206ENST00000619300 ATP6V1AP38606 617 aa23.11■■□□□ 1.29
PSPC1-206ENST00000619300 FNBP4Q8N3X1 1017 aaPredicted RBP23.11■■□□□ 1.29
PSPC1-206ENST00000619300 FAM89AQ96GI7 184 aa23.11■■□□□ 1.29
PSPC1-206ENST00000619300 BOLA2Q9H3K6 86 aa23.11■■□□□ 1.29
PSPC1-206ENST00000619300 DBNLQ9UJU6 430 aaKnown RBP23.11■■□□□ 1.29
PSPC1-206ENST00000619300 LOC102724428A0A0B4J2F2 783 aa23.11■■□□□ 1.29
PSPC1-206ENST00000619300 IL15P40933 162 aaPredicted RBP23.11■■□□□ 1.29
PSPC1-206ENST00000619300 SIK1P57059 783 aa23.11■■□□□ 1.29
PSPC1-206ENST00000619300 NLRP10Q86W26 655 aa23.11■■□□□ 1.29
PSPC1-206ENST00000619300 IL17RAQ96F46 866 aa23.11■■□□□ 1.29
PSPC1-206ENST00000619300 HSP90AA1P07900 732 aaKnown RBP23.1■■□□□ 1.29
PSPC1-206ENST00000619300 ATP5JP18859 108 aa23.1■■□□□ 1.29
PSPC1-206ENST00000619300 DZIP3Q86Y13 1208 aaKnown RBP23.1■■□□□ 1.29
PSPC1-206ENST00000619300 AK9Q5TCS8 1911 aa23.1■■□□□ 1.29
PSPC1-206ENST00000619300 EYA2O00167 538 aa23.09■■□□□ 1.29
PSPC1-206ENST00000619300 INTS5Q6P9B9 1019 aaKnown RBP23.09■■□□□ 1.29
PSPC1-206ENST00000619300 PALD1Q9ULE6 856 aa23.09■■□□□ 1.29
PSPC1-206ENST00000619300 HIP1O00291 1037 aa23.09■■□□□ 1.29
PSPC1-206ENST00000619300 CIAO1O76071 339 aa23.09■■□□□ 1.29
PSPC1-206ENST00000619300 GPTP24298 496 aa23.09■■□□□ 1.29
PSPC1-206ENST00000619300 EIF5P55010 431 aaKnown RBP23.09■■□□□ 1.29
PSPC1-206ENST00000619300 KIAA1211Q6ZU35 1233 aa23.09■■□□□ 1.29
PSPC1-206ENST00000619300 LSG1Q9H089 658 aaKnown RBP23.09■■□□□ 1.29
PSPC1-206ENST00000619300 GPR108Q9NPR9 543 aa23.09■■□□□ 1.29
PSPC1-206ENST00000619300 CCDC87Q9NVE4 849 aa23.09■■□□□ 1.29
PSPC1-206ENST00000619300 TBC1D2BQ9UPU7 963 aa23.09■■□□□ 1.29
PSPC1-206ENST00000619300 CSF1RP07333 972 aa23.08■■□□□ 1.29
PSPC1-206ENST00000619300 HSPA4P34932 840 aa23.08■■□□□ 1.29
PSPC1-206ENST00000619300 CCDC57Q2TAC2 916 aa23.08■■□□□ 1.29
PSPC1-206ENST00000619300 SMARCC1Q92922 1105 aaPredicted RBP23.08■■□□□ 1.29
PSPC1-206ENST00000619300 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.08■■□□□ 1.28
PSPC1-206ENST00000619300 CDHR2Q9BYE9 1310 aa23.08■■□□□ 1.28
PSPC1-206ENST00000619300 ZNF594Q96JF6 807 aaPredicted RBP23.08■■□□□ 1.28
PSPC1-206ENST00000619300 CIZ1Q9ULV3 898 aaPredicted RBP23.08■■□□□ 1.28
PSPC1-206ENST00000619300 SPATA31A6Q5VVP1 1343 aa23.07■■□□□ 1.28
PSPC1-206ENST00000619300 RAD50Q92878 1312 aa23.07■■□□□ 1.28
PSPC1-206ENST00000619300 KCNQ2O43526 872 aa23.07■■□□□ 1.28
PSPC1-206ENST00000619300 CRKLP46109 303 aaKnown RBP23.07■■□□□ 1.28
PSPC1-206ENST00000619300 DBNDD2Q9BQY9 259 aa23.07■■□□□ 1.28
PSPC1-206ENST00000619300 ITPK1Q13572 414 aa23.06■■□□□ 1.28
PSPC1-206ENST00000619300 LRRC24Q50LG9 513 aa23.06■■□□□ 1.28
PSPC1-206ENST00000619300 PALLDQ8WX93 1383 aa23.06■■□□□ 1.28
PSPC1-206ENST00000619300 NEK4P51957 841 aa23.06■■□□□ 1.28
PSPC1-206ENST00000619300 FBXO3Q9UK99 471 aa23.06■■□□□ 1.28
PSPC1-206ENST00000619300 SYNE4Q8N205 404 aa23.05■■□□□ 1.28
PSPC1-206ENST00000619300 ZNF34Q8IZ26 560 aa23.04■■□□□ 1.28
PSPC1-206ENST00000619300 FSD1Q9BTV5 496 aa23.04■■□□□ 1.28
PSPC1-206ENST00000619300 PUS3Q9BZE2 481 aaKnown RBP23.04■■□□□ 1.28
PSPC1-206ENST00000619300 FOXD4L1Q9NU39 408 aa23.04■■□□□ 1.28
PSPC1-206ENST00000619300 TRMT112Q9UI30 125 aaKnown RBP23.04■■□□□ 1.28
PSPC1-206ENST00000619300 USP21Q9UK80 565 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms