RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 LMBR1LQ6UX01 489 aa21.17■□□□□ 0.98
PCDHGC3-205ENST00000617641 CNTROBQ8N137 903 aa21.17■□□□□ 0.98
PCDHGC3-205ENST00000617641 GPATCH3Q96I76 525 aa21.17■□□□□ 0.98
PCDHGC3-205ENST00000617641 CCDC8Q9H0W5 538 aaPredicted RBP21.17■□□□□ 0.98
PCDHGC3-205ENST00000617641 A0A0G2JS52 829 aa21.16■□□□□ 0.98
PCDHGC3-205ENST00000617641 CYP19A1P11511 503 aaPredicted RBP21.16■□□□□ 0.98
PCDHGC3-205ENST00000617641 RABEP1Q15276 862 aa21.16■□□□□ 0.98
PCDHGC3-205ENST00000617641 KIF6Q6ZMV9 814 aa21.16■□□□□ 0.98
PCDHGC3-205ENST00000617641 MARCH10Q8NA82 808 aaPredicted RBP21.16■□□□□ 0.98
PCDHGC3-205ENST00000617641 ARXQ96QS3 562 aa21.16■□□□□ 0.98
PCDHGC3-205ENST00000617641 ISCA1Q9BUE6 129 aa21.16■□□□□ 0.98
PCDHGC3-205ENST00000617641 TLR7Q9NYK1 1049 aaKnown RBP21.16■□□□□ 0.98
PCDHGC3-205ENST00000617641 TCIRG1Q13488 830 aa21.15■□□□□ 0.98
PCDHGC3-205ENST00000617641 ACSBG1Q96GR2 724 aa21.15■□□□□ 0.98
PCDHGC3-205ENST00000617641 IL25Q9H293 177 aa21.15■□□□□ 0.98
PCDHGC3-205ENST00000617641 CHMP3Q9Y3E7 222 aa21.15■□□□□ 0.98
PCDHGC3-205ENST00000617641 ANO2Q9NQ90 1003 aa21.15■□□□□ 0.98
PCDHGC3-205ENST00000617641 ZBTB1Q9Y2K1 713 aa21.13■□□□□ 0.97
PCDHGC3-205ENST00000617641 BARGINQ6ZT62 677 aa21.13■□□□□ 0.97
PCDHGC3-205ENST00000617641 K7ELQ4 463 aaPredicted RBP21.12■□□□□ 0.97
PCDHGC3-205ENST00000617641 FRAT2O75474 233 aaPredicted RBP21.12■□□□□ 0.97
PCDHGC3-205ENST00000617641 TFCP2Q12800 502 aa21.12■□□□□ 0.97
PCDHGC3-205ENST00000617641 MAP3K15Q6ZN16 1313 aa21.12■□□□□ 0.97
PCDHGC3-205ENST00000617641 C8orf37Q96NL8 207 aa21.11■□□□□ 0.97
PCDHGC3-205ENST00000617641 HLFQ16534 295 aa21.1■□□□□ 0.97
PCDHGC3-205ENST00000617641 TRIM28Q13263 835 aaKnown RBP21.1■□□□□ 0.97
PCDHGC3-205ENST00000617641 SGSM2O43147 1006 aa21.09■□□□□ 0.97
PCDHGC3-205ENST00000617641 TNNI3KQ59H18 835 aa21.09■□□□□ 0.97
PCDHGC3-205ENST00000617641 GIGYF2Q6Y7W6 1299 aaKnown RBP21.09■□□□□ 0.97
PCDHGC3-205ENST00000617641 NGLY1Q96IV0 654 aa21.09■□□□□ 0.97
PCDHGC3-205ENST00000617641 FPGT-TNNI3KV9GXZ4 949 aa21.09■□□□□ 0.97
PCDHGC3-205ENST00000617641 JCADQ9P266 1359 aa21.09■□□□□ 0.97
PCDHGC3-205ENST00000617641 FAM98CQ17RN3 349 aaKnown RBP21.09■□□□□ 0.97
PCDHGC3-205ENST00000617641 CWC27Q6UX04 472 aaKnown RBP21.08■□□□□ 0.97
PCDHGC3-205ENST00000617641 CHMP5Q9NZZ3 219 aa21.08■□□□□ 0.97
PCDHGC3-205ENST00000617641 PALD1Q9ULE6 856 aa21.08■□□□□ 0.97
PCDHGC3-205ENST00000617641 MCCP23508 829 aa21.07■□□□□ 0.96
PCDHGC3-205ENST00000617641 EVI5LQ96CN4 794 aa21.07■□□□□ 0.96
PCDHGC3-205ENST00000617641 FAM89AQ96GI7 184 aa21.07■□□□□ 0.96
PCDHGC3-205ENST00000617641 BOLA2Q9H3K6 86 aa21.07■□□□□ 0.96
PCDHGC3-205ENST00000617641 FOXD4L1Q9NU39 408 aa21.07■□□□□ 0.96
PCDHGC3-205ENST00000617641 DBNLQ9UJU6 430 aaKnown RBP21.07■□□□□ 0.96
PCDHGC3-205ENST00000617641 BCL9LQ86UU0 1499 aa21.07■□□□□ 0.96
PCDHGC3-205ENST00000617641 GPTP24298 496 aa21.07■□□□□ 0.96
PCDHGC3-205ENST00000617641 DIAPH3Q9NSV4 1193 aa21.07■□□□□ 0.96
PCDHGC3-205ENST00000617641 PCCAP05165 728 aaPredicted RBP21.06■□□□□ 0.96
PCDHGC3-205ENST00000617641 DDIT3P35638 169 aa21.06■□□□□ 0.96
PCDHGC3-205ENST00000617641 ATG9AQ7Z3C6 839 aa21.06■□□□□ 0.96
PCDHGC3-205ENST00000617641 HSP90AA1P07900 732 aaKnown RBP21.06■□□□□ 0.96
PCDHGC3-205ENST00000617641 ZNF594Q96JF6 807 aaPredicted RBP21.06■□□□□ 0.96
PCDHGC3-205ENST00000617641 IL6STP40189 918 aaPredicted RBP21.05■□□□□ 0.96
PCDHGC3-205ENST00000617641 TBC1D2BQ9UPU7 963 aa21.05■□□□□ 0.96
PCDHGC3-205ENST00000617641 ATP6V1AP38606 617 aa21.05■□□□□ 0.96
PCDHGC3-205ENST00000617641 VPS72Q15906 364 aa21.05■□□□□ 0.96
PCDHGC3-205ENST00000617641 ZBTB38Q8NAP3 1195 aaPredicted RBP21.05■□□□□ 0.96
PCDHGC3-205ENST00000617641 KCNQ2O43526 872 aa21.04■□□□□ 0.96
PCDHGC3-205ENST00000617641 ST18O60284 1047 aa21.04■□□□□ 0.96
PCDHGC3-205ENST00000617641 NLRP10Q86W26 655 aa21.04■□□□□ 0.96
PCDHGC3-205ENST00000617641 DZIP3Q86Y13 1208 aaKnown RBP21.04■□□□□ 0.96
PCDHGC3-205ENST00000617641 SYNE4Q8N205 404 aa21.04■□□□□ 0.96
PCDHGC3-205ENST00000617641 ANKRD36CQ5JPF3 1778 aa21.04■□□□□ 0.96
PCDHGC3-205ENST00000617641 LOC102724428A0A0B4J2F2 783 aa21.04■□□□□ 0.96
PCDHGC3-205ENST00000617641 SIK1P57059 783 aa21.04■□□□□ 0.96
PCDHGC3-205ENST00000617641 LRRC24Q50LG9 513 aa21.04■□□□□ 0.96
PCDHGC3-205ENST00000617641 DBNDD2Q9BQY9 259 aa21.04■□□□□ 0.96
PCDHGC3-205ENST00000617641 LSG1Q9H089 658 aaKnown RBP21.04■□□□□ 0.96
PCDHGC3-205ENST00000617641 RAD50Q92878 1312 aa21.03■□□□□ 0.96
PCDHGC3-205ENST00000617641 EPB41L2O43491 1005 aaKnown RBP21.03■□□□□ 0.96
PCDHGC3-205ENST00000617641 HSP90AB3PQ58FF7 597 aa21.03■□□□□ 0.96
PCDHGC3-205ENST00000617641 INTS5Q6P9B9 1019 aaKnown RBP21.03■□□□□ 0.96
PCDHGC3-205ENST00000617641 NUP98P52948 1817 aa21.03■□□□□ 0.96
PCDHGC3-205ENST00000617641 ANAPC15P60006 121 aa21.03■□□□□ 0.96
PCDHGC3-205ENST00000617641 CCDC85AQ96PX6 553 aaPredicted RBP21.03■□□□□ 0.96
PCDHGC3-205ENST00000617641 CCDC87Q9NVE4 849 aa21.03■□□□□ 0.96
PCDHGC3-205ENST00000617641 PALLDQ8WX93 1383 aa21.02■□□□□ 0.96
PCDHGC3-205ENST00000617641 IL15P40933 162 aaPredicted RBP21.02■□□□□ 0.96
PCDHGC3-205ENST00000617641 CRKLP46109 303 aaKnown RBP21.02■□□□□ 0.96
PCDHGC3-205ENST00000617641 ITPK1Q13572 414 aa21.02■□□□□ 0.96
PCDHGC3-205ENST00000617641 RUFY2Q8WXA3 655 aa21.02■□□□□ 0.96
PCDHGC3-205ENST00000617641 EYA2O00167 538 aa21.01■□□□□ 0.95
PCDHGC3-205ENST00000617641 ATP5JP18859 108 aa21.01■□□□□ 0.95
PCDHGC3-205ENST00000617641 HSPA4P34932 840 aa21.01■□□□□ 0.95
PCDHGC3-205ENST00000617641 NEK4P51957 841 aa21.01■□□□□ 0.95
PCDHGC3-205ENST00000617641 PLA2G12BQ9BX93 195 aa21.01■□□□□ 0.95
PCDHGC3-205ENST00000617641 PUS3Q9BZE2 481 aaKnown RBP21.01■□□□□ 0.95
PCDHGC3-205ENST00000617641 ERVV-1B6SEH8 477 aa21.01■□□□□ 0.95
PCDHGC3-205ENST00000617641 CCDC57Q2TAC2 916 aa21.01■□□□□ 0.95
PCDHGC3-205ENST00000617641 KIAA1211Q6ZU35 1233 aa21.01■□□□□ 0.95
PCDHGC3-205ENST00000617641 EDC3Q96F86 508 aaKnown RBP21.01■□□□□ 0.95
PCDHGC3-205ENST00000617641 EIF5P55010 431 aaKnown RBP21■□□□□ 0.95
PCDHGC3-205ENST00000617641 FNBP4Q8N3X1 1017 aaPredicted RBP21■□□□□ 0.95
PCDHGC3-205ENST00000617641 FSD1Q9BTV5 496 aa21■□□□□ 0.95
PCDHGC3-205ENST00000617641 FAM227BQ96M60 508 aa21■□□□□ 0.95
PCDHGC3-205ENST00000617641 IL17RAQ96F46 866 aa20.99■□□□□ 0.95
PCDHGC3-205ENST00000617641 NDUFB9Q9Y6M9 179 aa20.99■□□□□ 0.95
PCDHGC3-205ENST00000617641 CDHR2Q9BYE9 1310 aa20.99■□□□□ 0.95
PCDHGC3-205ENST00000617641 CIAO1O76071 339 aa20.99■□□□□ 0.95
PCDHGC3-205ENST00000617641 CSF1RP07333 972 aa20.99■□□□□ 0.95
PCDHGC3-205ENST00000617641 NMIQ13287 307 aaPredicted RBP20.99■□□□□ 0.95
PCDHGC3-205ENST00000617641 NEUROD6Q96NK8 337 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms