RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 C1orf115Q9H7X2 142 aa14.67□□□□□ -0.06
PDPN-211ENST00000617617 LRP5O75197 1615 aa14.66□□□□□ -0.06
PDPN-211ENST00000617617 NPM2Q86SE8 214 aaKnown RBP14.66□□□□□ -0.06
PDPN-211ENST00000617617 NLRP10Q86W26 655 aa14.66□□□□□ -0.06
PDPN-211ENST00000617617 RTCBQ9Y3I0 505 aaKnown RBP14.66□□□□□ -0.06
PDPN-211ENST00000617617 ZBTB38Q8NAP3 1195 aaPredicted RBP14.66□□□□□ -0.06
PDPN-211ENST00000617617 RIC1Q4ADV7 1423 aa14.65□□□□□ -0.06
PDPN-211ENST00000617617 AKT1S1Q96B36 256 aa14.65□□□□□ -0.06
PDPN-211ENST00000617617 NUCB1Q02818 461 aa14.65□□□□□ -0.06
PDPN-211ENST00000617617 CCDC125Q86Z20 511 aa14.65□□□□□ -0.06
PDPN-211ENST00000617617 SUCLG2Q96I99 432 aa14.65□□□□□ -0.06
PDPN-211ENST00000617617 NOP58Q9Y2X3 529 aaKnown RBP14.65□□□□□ -0.06
PDPN-211ENST00000617617 EP400Q96L91 3159 aa14.65□□□□□ -0.06
PDPN-211ENST00000617617 APBA3O96018 575 aa14.65□□□□□ -0.06
PDPN-211ENST00000617617 USP42Q9H9J4 1324 aaKnown RBP14.64□□□□□ -0.07
PDPN-211ENST00000617617 A0A1B0GUL6 1792 aa14.64□□□□□ -0.07
PDPN-211ENST00000617617 ATP5J2-PTCD1G3V325 749 aa14.64□□□□□ -0.07
PDPN-211ENST00000617617 GNPATO15228 680 aa14.64□□□□□ -0.07
PDPN-211ENST00000617617 TBC1D2BQ9UPU7 963 aa14.64□□□□□ -0.07
PDPN-211ENST00000617617 UBN2Q6ZU65 1347 aa14.64□□□□□ -0.07
PDPN-211ENST00000617617 CAMKK2Q96RR4 588 aa14.63□□□□□ -0.07
PDPN-211ENST00000617617 BCL2L12Q9HB09 334 aa14.63□□□□□ -0.07
PDPN-211ENST00000617617 FOXO4P98177 505 aa14.63□□□□□ -0.07
PDPN-211ENST00000617617 PNMA6EA0A0J9YXQ4 647 aa14.62□□□□□ -0.07
PDPN-211ENST00000617617 RAB11FIP3O75154 756 aa14.62□□□□□ -0.07
PDPN-211ENST00000617617 TRAPPC3LQ5T215 181 aa14.62□□□□□ -0.07
PDPN-211ENST00000617617 PPP1R42Q7Z4L9 355 aa14.62□□□□□ -0.07
PDPN-211ENST00000617617 RTL9Q8NET4 1388 aa14.62□□□□□ -0.07
PDPN-211ENST00000617617 HSP90B1P14625 803 aaKnown RBP14.62□□□□□ -0.07
PDPN-211ENST00000617617 FLAD1Q8NFF5 587 aa14.62□□□□□ -0.07
PDPN-211ENST00000617617 ARHGEF1Q92888 912 aaKnown RBP14.62□□□□□ -0.07
PDPN-211ENST00000617617 BICC1Q9H694 974 aaKnown RBP14.62□□□□□ -0.07
PDPN-211ENST00000617617 CSF1RP07333 972 aa14.61□□□□□ -0.07
PDPN-211ENST00000617617 KCNQ4P56696 695 aa14.61□□□□□ -0.07
PDPN-211ENST00000617617 HSP90AB4PQ58FF6 505 aa14.61□□□□□ -0.07
PDPN-211ENST00000617617 UBE3BQ7Z3V4 1068 aa14.61□□□□□ -0.07
PDPN-211ENST00000617617 PDZRN3Q9UPQ7 1066 aa14.61□□□□□ -0.07
PDPN-211ENST00000617617 ZNF330Q9Y3S2 320 aaPredicted RBP14.61□□□□□ -0.07
PDPN-211ENST00000617617 ARAP2Q8WZ64 1704 aa14.6□□□□□ -0.07
PDPN-211ENST00000617617 NTSR2O95665 410 aa14.6□□□□□ -0.07
PDPN-211ENST00000617617 RFX5P48382 616 aaPredicted RBP14.6□□□□□ -0.07
PDPN-211ENST00000617617 CHD1LQ86WJ1 897 aa14.6□□□□□ -0.07
PDPN-211ENST00000617617 AMIGO3Q86WK7 504 aa14.6□□□□□ -0.07
PDPN-211ENST00000617617 COPRSQ9NQ92 184 aa14.6□□□□□ -0.07
PDPN-211ENST00000617617 FBXO3Q9UK99 471 aa14.6□□□□□ -0.07
PDPN-211ENST00000617617 SRGAP3O43295 1099 aa14.59□□□□□ -0.07
PDPN-211ENST00000617617 ZPR1O75312 459 aa14.59□□□□□ -0.07
PDPN-211ENST00000617617 EPHA10Q5JZY3 1008 aa14.59□□□□□ -0.07
PDPN-211ENST00000617617 SLC10A5Q5PT55 438 aa14.59□□□□□ -0.07
PDPN-211ENST00000617617 UTP14AQ9BVJ6 771 aaKnown RBP14.59□□□□□ -0.07
PDPN-211ENST00000617617 SPEF2Q9C093 1822 aa14.58□□□□□ -0.07
PDPN-211ENST00000617617 SUSD4Q5VX71 490 aa14.58□□□□□ -0.08
PDPN-211ENST00000617617 NYXQ9GZU5 481 aa14.58□□□□□ -0.08
PDPN-211ENST00000617617 SH3TC1Q8TE82 1336 aa14.58□□□□□ -0.08
PDPN-211ENST00000617617 USPL1Q5W0Q7 1092 aa14.58□□□□□ -0.08
PDPN-211ENST00000617617 ERC1Q8IUD2 1116 aa14.58□□□□□ -0.08
PDPN-211ENST00000617617 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.57□□□□□ -0.08
PDPN-211ENST00000617617 PDE8AO60658 829 aa14.57□□□□□ -0.08
PDPN-211ENST00000617617 RFC4P35249 363 aa14.57□□□□□ -0.08
PDPN-211ENST00000617617 NIP7Q9Y221 180 aaKnown RBP eCLIP14.57□□□□□ -0.08
PDPN-211ENST00000617617 TNRC6CQ9HCJ0 1690 aaKnown RBP14.57□□□□□ -0.08
PDPN-211ENST00000617617 CARMIL3Q8ND23 1372 aa14.57□□□□□ -0.08
PDPN-211ENST00000617617 ANKRD31Q8N7Z5 1873 aa14.57□□□□□ -0.08
PDPN-211ENST00000617617 BAG6P46379 1132 aa14.56□□□□□ -0.08
PDPN-211ENST00000617617 ZNF827Q17R98 1081 aa14.56□□□□□ -0.08
PDPN-211ENST00000617617 CIAO1O76071 339 aa14.56□□□□□ -0.08
PDPN-211ENST00000617617 TBC1D9BQ66K14 1250 aa14.56□□□□□ -0.08
PDPN-211ENST00000617617 TRMT112Q9UI30 125 aaKnown RBP14.56□□□□□ -0.08
PDPN-211ENST00000617617 GPTP24298 496 aa14.56□□□□□ -0.08
PDPN-211ENST00000617617 AK9Q5TCS8 1911 aa14.56□□□□□ -0.08
PDPN-211ENST00000617617 SALL3Q9BXA9 1300 aa14.55□□□□□ -0.08
PDPN-211ENST00000617617 IRS4O14654 1257 aaPredicted RBP14.55□□□□□ -0.08
PDPN-211ENST00000617617 GYS1P13807 737 aa14.55□□□□□ -0.08
PDPN-211ENST00000617617 TM4SF1P30408 202 aa14.55□□□□□ -0.08
PDPN-211ENST00000617617 CTSWP56202 376 aa14.55□□□□□ -0.08
PDPN-211ENST00000617617 PDE4AP27815 886 aa14.55□□□□□ -0.08
PDPN-211ENST00000617617 PTPN12Q05209 780 aaKnown RBP14.55□□□□□ -0.08
PDPN-211ENST00000617617 KIF1BPQ96EK5 621 aa14.55□□□□□ -0.08
PDPN-211ENST00000617617 FAM89AQ96GI7 184 aa14.55□□□□□ -0.08
PDPN-211ENST00000617617 LRRCC1Q9C099 1032 aa14.55□□□□□ -0.08
PDPN-211ENST00000617617 SRP68Q9UHB9 627 aaKnown RBP14.55□□□□□ -0.08
PDPN-211ENST00000617617 KIF13BQ9NQT8 1826 aa14.55□□□□□ -0.08
PDPN-211ENST00000617617 AOX1Q06278 1338 aa14.54□□□□□ -0.08
PDPN-211ENST00000617617 LMBR1LQ6UX01 489 aa14.54□□□□□ -0.08
PDPN-211ENST00000617617 SETDB2Q96T68 719 aa14.54□□□□□ -0.08
PDPN-211ENST00000617617 OSBPL3Q9H4L5 887 aa14.54□□□□□ -0.08
PDPN-211ENST00000617617 SF3B2Q13435 895 aaKnown RBP14.54□□□□□ -0.08
PDPN-211ENST00000617617 ANKRD45Q5TZF3 282 aa14.54□□□□□ -0.08
PDPN-211ENST00000617617 TTLL11Q8NHH1 800 aa14.54□□□□□ -0.08
PDPN-211ENST00000617617 ARXQ96QS3 562 aa14.54□□□□□ -0.08
PDPN-211ENST00000617617 PNPLA7Q6ZV29 1317 aa14.54□□□□□ -0.08
PDPN-211ENST00000617617 LRRC37AA6NMS7 1700 aa14.53□□□□□ -0.08
PDPN-211ENST00000617617 SF3B3Q15393 1217 aaKnown RBP14.53□□□□□ -0.08
PDPN-211ENST00000617617 DLEC1Q9Y238 1755 aa14.53□□□□□ -0.08
PDPN-211ENST00000617617 EZH2Q15910 746 aaKnown RBP14.53□□□□□ -0.08
PDPN-211ENST00000617617 SURF6O75683 361 aaKnown RBP14.52□□□□□ -0.08
PDPN-211ENST00000617617 GPR108Q9NPR9 543 aa14.52□□□□□ -0.08
PDPN-211ENST00000617617 SLC15A2Q16348 729 aa14.52□□□□□ -0.09
PDPN-211ENST00000617617 RHPN1Q8TCX5 695 aa14.52□□□□□ -0.09
PDPN-211ENST00000617617 STAP2Q9UGK3 403 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms