RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 MEX3CQ5U5Q3 659 aaKnown RBP9.58□□□□□ -0.88
NEK3-207ENST00000617054 DDRGK1Q96HY6 314 aa9.58□□□□□ -0.88
NEK3-207ENST00000617054 TLR7Q9NYK1 1049 aaKnown RBP9.58□□□□□ -0.88
NEK3-207ENST00000617054 KIF1BPQ96EK5 621 aa9.58□□□□□ -0.88
NEK3-207ENST00000617054 ZNF594Q96JF6 807 aaPredicted RBP9.58□□□□□ -0.88
NEK3-207ENST00000617054 PLEKHG2Q9H7P9 1386 aa9.58□□□□□ -0.88
NEK3-207ENST00000617054 TNS2Q63HR2 1409 aa9.58□□□□□ -0.88
NEK3-207ENST00000617054 UTYO14607 1347 aa9.58□□□□□ -0.88
NEK3-207ENST00000617054 BCL9LQ86UU0 1499 aa9.58□□□□□ -0.88
NEK3-207ENST00000617054 SLKQ9H2G2 1235 aaPredicted RBP9.58□□□□□ -0.88
NEK3-207ENST00000617054 SLIT2O94813 1529 aa9.58□□□□□ -0.88
NEK3-207ENST00000617054 G3BP1Q13283 466 aaKnown RBP eCLIP9.57□□□□□ -0.88
NEK3-207ENST00000617054 MTX1Q13505 466 aa9.57□□□□□ -0.88
NEK3-207ENST00000617054 AACSQ86V21 672 aa9.57□□□□□ -0.88
NEK3-207ENST00000617054 CWC25Q9NXE8 425 aaPredicted RBP9.57□□□□□ -0.88
NEK3-207ENST00000617054 THRAP3Q9Y2W1 955 aaKnown RBP9.57□□□□□ -0.88
NEK3-207ENST00000617054 NDUFB9Q9Y6M9 179 aa9.57□□□□□ -0.88
NEK3-207ENST00000617054 JCADQ9P266 1359 aa9.57□□□□□ -0.88
NEK3-207ENST00000617054 EAF2Q96CJ1 260 aaPredicted RBP9.57□□□□□ -0.88
NEK3-207ENST00000617054 IL25Q9H293 177 aa9.57□□□□□ -0.88
NEK3-207ENST00000617054 UBR2Q8IWV8 1755 aa9.57□□□□□ -0.88
NEK3-207ENST00000617054 RAB11FIP3O75154 756 aa9.57□□□□□ -0.88
NEK3-207ENST00000617054 CASP7P55210 303 aa9.57□□□□□ -0.88
NEK3-207ENST00000617054 ITPK1Q13572 414 aa9.57□□□□□ -0.88
NEK3-207ENST00000617054 TBC1D2Q9BYX2 928 aa9.57□□□□□ -0.88
NEK3-207ENST00000617054 FOXO4P98177 505 aa9.56□□□□□ -0.88
NEK3-207ENST00000617054 PTPN12Q05209 780 aaKnown RBP9.56□□□□□ -0.88
NEK3-207ENST00000617054 CLASRPQ8N2M8 674 aaKnown RBP9.56□□□□□ -0.88
NEK3-207ENST00000617054 OSBPL3Q9H4L5 887 aa9.56□□□□□ -0.88
NEK3-207ENST00000617054 N4BP2Q86UW6 1770 aaPredicted RBP9.56□□□□□ -0.88
NEK3-207ENST00000617054 LRP6O75581 1613 aa9.56□□□□□ -0.88
NEK3-207ENST00000617054 LOC102724428A0A0B4J2F2 783 aa9.56□□□□□ -0.88
NEK3-207ENST00000617054 SIK1P57059 783 aa9.56□□□□□ -0.88
NEK3-207ENST00000617054 KIF6Q6ZMV9 814 aa9.56□□□□□ -0.88
NEK3-207ENST00000617054 PI4K2BQ8TCG2 481 aa9.56□□□□□ -0.88
NEK3-207ENST00000617054 ARFGEF2Q9Y6D5 1785 aa9.56□□□□□ -0.88
NEK3-207ENST00000617054 H7C1W4 665 aa9.55□□□□□ -0.88
NEK3-207ENST00000617054 CD2BP2O95400 341 aaKnown RBP9.55□□□□□ -0.88
NEK3-207ENST00000617054 IFIT2P09913 472 aaKnown RBP9.55□□□□□ -0.88
NEK3-207ENST00000617054 TFCP2Q12800 502 aa9.55□□□□□ -0.88
NEK3-207ENST00000617054 TCIRG1Q13488 830 aa9.55□□□□□ -0.88
NEK3-207ENST00000617054 BARGINQ6ZT62 677 aa9.55□□□□□ -0.88
NEK3-207ENST00000617054 KIF2CQ99661 725 aa9.55□□□□□ -0.88
NEK3-207ENST00000617054 AFDNP55196 1824 aaKnown RBP9.55□□□□□ -0.88
NEK3-207ENST00000617054 NRAPQ86VF7 1730 aa9.55□□□□□ -0.88
NEK3-207ENST00000617054 CRKLP46109 303 aaKnown RBP9.55□□□□□ -0.88
NEK3-207ENST00000617054 RFX5P48382 616 aaPredicted RBP9.55□□□□□ -0.88
NEK3-207ENST00000617054 CDCA7Q9BWT1 371 aaPredicted RBP9.55□□□□□ -0.88
NEK3-207ENST00000617054 TEX13AQ9BXU3 409 aaPredicted RBP9.55□□□□□ -0.88
NEK3-207ENST00000617054 VPS72Q15906 364 aa9.55□□□□□ -0.88
NEK3-207ENST00000617054 DZIP3Q86Y13 1208 aaKnown RBP9.55□□□□□ -0.88
NEK3-207ENST00000617054 FNBP4Q8N3X1 1017 aaPredicted RBP9.55□□□□□ -0.88
NEK3-207ENST00000617054 EDC3Q96F86 508 aaKnown RBP9.55□□□□□ -0.88
NEK3-207ENST00000617054 PUS3Q9BZE2 481 aaKnown RBP9.55□□□□□ -0.88
NEK3-207ENST00000617054 ERBB4Q15303 1308 aa9.55□□□□□ -0.88
NEK3-207ENST00000617054 DOT1LQ8TEK3 1739 aa9.54□□□□□ -0.88
NEK3-207ENST00000617054 PAPPAQ13219 1627 aa9.54□□□□□ -0.88
NEK3-207ENST00000617054 LRRC24Q50LG9 513 aa9.54□□□□□ -0.88
NEK3-207ENST00000617054 INTS5Q6P9B9 1019 aaKnown RBP9.54□□□□□ -0.88
NEK3-207ENST00000617054 BOLA2Q9H3K6 86 aa9.54□□□□□ -0.88
NEK3-207ENST00000617054 STAP2Q9UGK3 403 aa9.54□□□□□ -0.88
NEK3-207ENST00000617054 HSP90AB4PQ58FF6 505 aa9.54□□□□□ -0.88
NEK3-207ENST00000617054 CCDC191Q8NCU4 936 aa9.54□□□□□ -0.88
NEK3-207ENST00000617054 USP26Q9BXU7 913 aa9.54□□□□□ -0.88
NEK3-207ENST00000617054 LAMB4A4D0S4 1761 aa9.54□□□□□ -0.88
NEK3-207ENST00000617054 CHGBP05060 677 aa9.53□□□□□ -0.88
NEK3-207ENST00000617054 SPOCK2Q92563 424 aa9.53□□□□□ -0.88
NEK3-207ENST00000617054 MAP3K15Q6ZN16 1313 aa9.53□□□□□ -0.88
NEK3-207ENST00000617054 UTRNP46939 3433 aa9.53□□□□□ -0.88
NEK3-207ENST00000617054 CHMLP26374 656 aa9.53□□□□□ -0.88
NEK3-207ENST00000617054 AFF2P51816 1311 aa9.53□□□□□ -0.88
NEK3-207ENST00000617054 TIMM10P62072 90 aa9.53□□□□□ -0.88
NEK3-207ENST00000617054 GIGYF2Q6Y7W6 1299 aaKnown RBP9.53□□□□□ -0.88
NEK3-207ENST00000617054 PALLDQ8WX93 1383 aa9.53□□□□□ -0.88
NEK3-207ENST00000617054 ISCA1Q9BUE6 129 aa9.53□□□□□ -0.88
NEK3-207ENST00000617054 HDAC5Q9UQL6 1122 aa9.53□□□□□ -0.88
NEK3-207ENST00000617054 RBM25P49756 843 aaKnown RBP9.53□□□□□ -0.88
NEK3-207ENST00000617054 RABL6Q3YEC7 729 aaPredicted RBP9.53□□□□□ -0.88
NEK3-207ENST00000617054 CWC27Q6UX04 472 aaKnown RBP9.53□□□□□ -0.88
NEK3-207ENST00000617054 CASC1Q6TDU7 716 aa9.52□□□□□ -0.89
NEK3-207ENST00000617054 NEUROD6Q96NK8 337 aa9.52□□□□□ -0.89
NEK3-207ENST00000617054 ANO2Q9NQ90 1003 aa9.52□□□□□ -0.89
NEK3-207ENST00000617054 TRMT112Q9UI30 125 aaKnown RBP9.52□□□□□ -0.89
NEK3-207ENST00000617054 NLRP10Q86W26 655 aa9.52□□□□□ -0.89
NEK3-207ENST00000617054 UBN2Q6ZU65 1347 aa9.52□□□□□ -0.89
NEK3-207ENST00000617054 GJD4Q96KN9 370 aaPredicted RBP9.51□□□□□ -0.89
NEK3-207ENST00000617054 CCDC87Q9NVE4 849 aa9.51□□□□□ -0.89
NEK3-207ENST00000617054 ERC2O15083 957 aa9.51□□□□□ -0.89
NEK3-207ENST00000617054 HCLS1P14317 486 aaPredicted RBP9.51□□□□□ -0.89
NEK3-207ENST00000617054 BECN1Q14457 450 aa9.51□□□□□ -0.89
NEK3-207ENST00000617054 BICDL1Q6ZP65 573 aa9.51□□□□□ -0.89
NEK3-207ENST00000617054 ERC1Q8IUD2 1116 aa9.51□□□□□ -0.89
NEK3-207ENST00000617054 LINC00116Q8NCU8 138 aa9.51□□□□□ -0.89
NEK3-207ENST00000617054 DBNDD2Q9BQY9 259 aa9.51□□□□□ -0.89
NEK3-207ENST00000617054 ESYT1Q9BSJ8 1104 aa9.51□□□□□ -0.89
NEK3-207ENST00000617054 COPRSQ9NQ92 184 aa9.51□□□□□ -0.89
NEK3-207ENST00000617054 ECHDC1Q9NTX5 307 aa9.51□□□□□ -0.89
NEK3-207ENST00000617054 DBNLQ9UJU6 430 aaKnown RBP9.51□□□□□ -0.89
NEK3-207ENST00000617054 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.51□□□□□ -0.89
NEK3-207ENST00000617054 ATG9AQ7Z3C6 839 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms