RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 KRT27Q7Z3Y8 459 aa15.2■□□□□ 0.02
NEDD8-MDP1-203ENST00000604306 DZIP3Q86Y13 1208 aaKnown RBP15.2■□□□□ 0.02
NEDD8-MDP1-203ENST00000604306 FBXO41Q8TF61 875 aa15.2■□□□□ 0.02
NEDD8-MDP1-203ENST00000604306 AK7Q96M32 723 aa15.2■□□□□ 0.02
NEDD8-MDP1-203ENST00000604306 BICC1Q9H694 974 aaKnown RBP15.2■□□□□ 0.02
NEDD8-MDP1-203ENST00000604306 TNS1Q9HBL0 1735 aaKnown RBP15.2■□□□□ 0.02
NEDD8-MDP1-203ENST00000604306 SALL3Q9BXA9 1300 aa15.19■□□□□ 0.02
NEDD8-MDP1-203ENST00000604306 CLEC4GQ6UXB4 293 aa15.19■□□□□ 0.02
NEDD8-MDP1-203ENST00000604306 PLEKHM2Q8IWE5 1019 aa15.19■□□□□ 0.02
NEDD8-MDP1-203ENST00000604306 ZBTB38Q8NAP3 1195 aaPredicted RBP15.19■□□□□ 0.02
NEDD8-MDP1-203ENST00000604306 COPRSQ9NQ92 184 aa15.19■□□□□ 0.02
NEDD8-MDP1-203ENST00000604306 HSP90B1P14625 803 aaKnown RBP15.18■□□□□ 0.02
NEDD8-MDP1-203ENST00000604306 PARP10Q53GL7 1025 aa15.18■□□□□ 0.02
NEDD8-MDP1-203ENST00000604306 UBE3BQ7Z3V4 1068 aa15.18■□□□□ 0.02
NEDD8-MDP1-203ENST00000604306 FBXO3Q9UK99 471 aa15.18■□□□□ 0.02
NEDD8-MDP1-203ENST00000604306 EXOC6BQ9Y2D4 811 aa15.18■□□□□ 0.02
NEDD8-MDP1-203ENST00000604306 ZNF652Q9Y2D9 606 aa15.18■□□□□ 0.02
NEDD8-MDP1-203ENST00000604306 ATP5J2-PTCD1G3V325 749 aa15.17■□□□□ 0.02
NEDD8-MDP1-203ENST00000604306 SURF6O75683 361 aaKnown RBP15.17■□□□□ 0.02
NEDD8-MDP1-203ENST00000604306 SLC27A3Q5K4L6 730 aa15.17■□□□□ 0.02
NEDD8-MDP1-203ENST00000604306 ZNF34Q8IZ26 560 aa15.17■□□□□ 0.02
NEDD8-MDP1-203ENST00000604306 RHPN1Q8TCX5 695 aa15.17■□□□□ 0.02
NEDD8-MDP1-203ENST00000604306 STAP2Q9UGK3 403 aa15.17■□□□□ 0.02
NEDD8-MDP1-203ENST00000604306 LRP5O75197 1615 aa15.17■□□□□ 0.02
NEDD8-MDP1-203ENST00000604306 USP42Q9H9J4 1324 aaKnown RBP15.17■□□□□ 0.02
NEDD8-MDP1-203ENST00000604306 TTC22Q5TAA0 569 aa15.16■□□□□ 0.02
NEDD8-MDP1-203ENST00000604306 NLRP10Q86W26 655 aa15.16■□□□□ 0.02
NEDD8-MDP1-203ENST00000604306 LINC00116Q8NCU8 138 aa15.16■□□□□ 0.02
NEDD8-MDP1-203ENST00000604306 RPS6KA4O75676 772 aa15.15■□□□□ 0.02
NEDD8-MDP1-203ENST00000604306 CAMTA2O94983 1202 aa15.15■□□□□ 0.02
NEDD8-MDP1-203ENST00000604306 RFX5P48382 616 aaPredicted RBP15.15■□□□□ 0.02
NEDD8-MDP1-203ENST00000604306 FOXO4P98177 505 aa15.15■□□□□ 0.02
NEDD8-MDP1-203ENST00000604306 CCNL1Q9UK58 526 aaPredicted RBP15.15■□□□□ 0.02
NEDD8-MDP1-203ENST00000604306 QSER1Q2KHR3 1735 aa15.14■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 ADRA2BP18089 450 aa15.14■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 ZNF330Q9Y3S2 320 aaPredicted RBP15.14■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 SPEF2Q9C093 1822 aa15.14■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 TTC41PQ6P2S7 1318 aa15.14■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 MX1P20591 662 aa15.13■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 PDE1AP54750 535 aa15.13■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 G3BP1Q13283 466 aaKnown RBP eCLIP15.13■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 HLFQ16534 295 aa15.13■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 EPHA10Q5JZY3 1008 aa15.13■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 CLASRPQ8N2M8 674 aaKnown RBP15.13■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 ARAP2Q8WZ64 1704 aa15.13■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 CIAO1O76071 339 aa15.12■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 CSF1RP07333 972 aa15.12■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 RXRBP28702 533 aa15.12■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 PTPN12Q05209 780 aaKnown RBP15.12■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 RTL9Q8NET4 1388 aa15.11■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 SMARCA5O60264 1052 aaPredicted RBP15.11■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 OS9Q13438 667 aaPredicted RBP15.11■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 LMBR1LQ6UX01 489 aa15.11■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 GPATCH3Q96I76 525 aa15.11■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 UPF2Q9HAU5 1272 aaKnown RBP15.11■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 GPR108Q9NPR9 543 aa15.11■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 NARFQ9UHQ1 456 aa15.11■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 TBC1D2BQ9UPU7 963 aa15.11■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 UBN2Q6ZU65 1347 aa15.11■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 A0A1B0GUL6 1792 aa15.11■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 PLSCR1O15162 318 aa15.1■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 CDC45O75419 566 aa15.1■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 PTF1AQ7RTS3 328 aa15.1■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 RTCBQ9Y3I0 505 aaKnown RBP15.1■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 SH3TC1Q8TE82 1336 aa15.1■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 RIC1Q4ADV7 1423 aa15.09■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 ERC2O15083 957 aa15.09■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 PDE8AO60658 829 aa15.09■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 GSPT1P15170 499 aaKnown RBP15.09■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 ANP32AP39687 249 aaKnown RBP15.09■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 IL15P40933 162 aaPredicted RBP15.09■□□□□ 0.01
NEDD8-MDP1-203ENST00000604306 APBB1O00213 710 aa15.08■□□□□ 0
NEDD8-MDP1-203ENST00000604306 SASH1O94885 1247 aa15.08■□□□□ 0
NEDD8-MDP1-203ENST00000604306 CTSWP56202 376 aa15.08■□□□□ 0
NEDD8-MDP1-203ENST00000604306 FAM182BQ5T319 152 aa15.08■□□□□ 0
NEDD8-MDP1-203ENST00000604306 CASC1Q6TDU7 716 aa15.08■□□□□ 0
NEDD8-MDP1-203ENST00000604306 TICAM2Q86XR7 235 aa15.08■□□□□ 0
NEDD8-MDP1-203ENST00000604306 C16orf71Q8IYS4 520 aaPredicted RBP15.08■□□□□ 0
NEDD8-MDP1-203ENST00000604306 UTP14AQ9BVJ6 771 aaKnown RBP15.08■□□□□ 0
NEDD8-MDP1-203ENST00000604306 TRMT112Q9UI30 125 aaKnown RBP15.08■□□□□ 0
NEDD8-MDP1-203ENST00000604306 IRS4O14654 1257 aaPredicted RBP15.07■□□□□ 0
NEDD8-MDP1-203ENST00000604306 GLRX3O76003 335 aaKnown RBP15.07■□□□□ 0
NEDD8-MDP1-203ENST00000604306 CCDC57Q2TAC2 916 aa15.07■□□□□ 0
NEDD8-MDP1-203ENST00000604306 OTUD7AQ8TE49 926 aaPredicted RBP15.07■□□□□ 0
NEDD8-MDP1-203ENST00000604306 ARXQ96QS3 562 aa15.07■□□□□ 0
NEDD8-MDP1-203ENST00000604306 PA2G4Q9UQ80 394 aaKnown RBP15.07■□□□□ 0
NEDD8-MDP1-203ENST00000604306 EYA2O00167 538 aa15.06■□□□□ 0
NEDD8-MDP1-203ENST00000604306 GNPATO15228 680 aa15.06■□□□□ 0
NEDD8-MDP1-203ENST00000604306 NTSR2O95665 410 aa15.06■□□□□ 0
NEDD8-MDP1-203ENST00000604306 IFIT2P09913 472 aaKnown RBP15.06■□□□□ 0
NEDD8-MDP1-203ENST00000604306 GPTP24298 496 aa15.06■□□□□ 0
NEDD8-MDP1-203ENST00000604306 SSFA2P28290 1259 aa15.06■□□□□ 0
NEDD8-MDP1-203ENST00000604306 FAM89AQ96GI7 184 aa15.06■□□□□ 0
NEDD8-MDP1-203ENST00000604306 NYXQ9GZU5 481 aa15.06■□□□□ 0
NEDD8-MDP1-203ENST00000604306 IL1RAPL2Q9NP60 686 aa15.06■□□□□ 0
NEDD8-MDP1-203ENST00000604306 ECHDC1Q9NTX5 307 aa15.06■□□□□ 0
NEDD8-MDP1-203ENST00000604306 NIP7Q9Y221 180 aaKnown RBP eCLIP15.06■□□□□ 0
NEDD8-MDP1-203ENST00000604306 ZNF609O15014 1411 aa15.06■□□□□ 0
NEDD8-MDP1-203ENST00000604306 EPB41L2O43491 1005 aaKnown RBP15.05■□□□□ -0
NEDD8-MDP1-203ENST00000604306 ZPR1O75312 459 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms