RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 ZNF34Q8IZ26 560 aa25.83■■□□□ 1.73
PNKP-203ENST00000593946 GNPATO15228 680 aa25.82■■□□□ 1.72
PNKP-203ENST00000593946 PCCAP05165 728 aaPredicted RBP25.82■■□□□ 1.72
PNKP-203ENST00000593946 GPTP24298 496 aa25.82■■□□□ 1.72
PNKP-203ENST00000593946 RGPD3A6NKT7 1758 aaPredicted RBP25.81■■□□□ 1.72
PNKP-203ENST00000593946 RGPD4Q7Z3J3 1758 aa25.81■■□□□ 1.72
PNKP-203ENST00000593946 ZBTB38Q8NAP3 1195 aaPredicted RBP25.81■■□□□ 1.72
PNKP-203ENST00000593946 UBN2Q6ZU65 1347 aa25.8■■□□□ 1.72
PNKP-203ENST00000593946 RGL2O15211 777 aa25.8■■□□□ 1.72
PNKP-203ENST00000593946 NOP58Q9Y2X3 529 aaKnown RBP25.8■■□□□ 1.72
PNKP-203ENST00000593946 FOXO4P98177 505 aa25.8■■□□□ 1.72
PNKP-203ENST00000593946 RTCBQ9Y3I0 505 aaKnown RBP25.8■■□□□ 1.72
PNKP-203ENST00000593946 SURF6O75683 361 aaKnown RBP25.79■■□□□ 1.72
PNKP-203ENST00000593946 RTL5Q5HYW3 569 aaPredicted RBP25.79■■□□□ 1.72
PNKP-203ENST00000593946 CLEC4GQ6UXB4 293 aa25.79■■□□□ 1.72
PNKP-203ENST00000593946 TSHZ2Q9NRE2 1034 aa25.79■■□□□ 1.72
PNKP-203ENST00000593946 ZBTB47Q9UFB7 747 aaPredicted RBP25.79■■□□□ 1.72
PNKP-203ENST00000593946 APBB1O00213 710 aa25.78■■□□□ 1.72
PNKP-203ENST00000593946 PLSCR1O15162 318 aa25.78■■□□□ 1.72
PNKP-203ENST00000593946 ZNF652Q9Y2D9 606 aa25.78■■□□□ 1.72
PNKP-203ENST00000593946 CDHR2Q9BYE9 1310 aa25.78■■□□□ 1.72
PNKP-203ENST00000593946 RAB11FIP3O75154 756 aa25.77■■□□□ 1.72
PNKP-203ENST00000593946 AMIGO3Q86WK7 504 aa25.77■■□□□ 1.72
PNKP-203ENST00000593946 LRRCC1Q9C099 1032 aa25.77■■□□□ 1.72
PNKP-203ENST00000593946 SMARCA5O60264 1052 aaPredicted RBP25.77■■□□□ 1.72
PNKP-203ENST00000593946 TXNRD1Q16881 649 aa25.77■■□□□ 1.72
PNKP-203ENST00000593946 HSP90AB4PQ58FF6 505 aa25.77■■□□□ 1.72
PNKP-203ENST00000593946 PROM2Q8N271 834 aa25.77■■□□□ 1.72
PNKP-203ENST00000593946 FAM89AQ96GI7 184 aa25.77■■□□□ 1.72
PNKP-203ENST00000593946 AK7Q96M32 723 aa25.77■■□□□ 1.72
PNKP-203ENST00000593946 PLA2G12BQ9BX93 195 aa25.77■■□□□ 1.72
PNKP-203ENST00000593946 NARFQ9UHQ1 456 aa25.77■■□□□ 1.72
PNKP-203ENST00000593946 SMIM5Q71RC9 77 aa25.76■■□□□ 1.71
PNKP-203ENST00000593946 LAMB2P55268 1798 aa25.76■■□□□ 1.71
PNKP-203ENST00000593946 PARP10Q53GL7 1025 aa25.75■■□□□ 1.71
PNKP-203ENST00000593946 LMBR1LQ6UX01 489 aa25.75■■□□□ 1.71
PNKP-203ENST00000593946 APBA3O96018 575 aa25.74■■□□□ 1.71
PNKP-203ENST00000593946 HMGB2P26583 209 aaKnown RBP25.74■■□□□ 1.71
PNKP-203ENST00000593946 PA2G4Q9UQ80 394 aaKnown RBP25.74■■□□□ 1.71
PNKP-203ENST00000593946 COL24A1Q17RW2 1714 aa25.74■■□□□ 1.71
PNKP-203ENST00000593946 RFX5P48382 616 aaPredicted RBP25.74■■□□□ 1.71
PNKP-203ENST00000593946 TRMT112Q9UI30 125 aaKnown RBP25.74■■□□□ 1.71
PNKP-203ENST00000593946 DDX60Q8IY21 1712 aaKnown RBP25.73■■□□□ 1.71
PNKP-203ENST00000593946 ARHGEF1Q92888 912 aaKnown RBP25.73■■□□□ 1.71
PNKP-203ENST00000593946 NIP7Q9Y221 180 aaKnown RBP eCLIP25.73■■□□□ 1.71
PNKP-203ENST00000593946 ADRA2BP18089 450 aa25.72■■□□□ 1.71
PNKP-203ENST00000593946 SUSD4Q5VX71 490 aa25.72■■□□□ 1.71
PNKP-203ENST00000593946 SYNE4Q8N205 404 aa25.72■■□□□ 1.71
PNKP-203ENST00000593946 KIF1BPQ96EK5 621 aa25.72■■□□□ 1.71
PNKP-203ENST00000593946 BCL2L12Q9HB09 334 aa25.72■■□□□ 1.71
PNKP-203ENST00000593946 COPRSQ9NQ92 184 aa25.72■■□□□ 1.71
PNKP-203ENST00000593946 PLEKHM2Q8IWE5 1019 aa25.71■■□□□ 1.71
PNKP-203ENST00000593946 C16orf71Q8IYS4 520 aaPredicted RBP25.71■■□□□ 1.71
PNKP-203ENST00000593946 RHPN1Q8TCX5 695 aa25.71■■□□□ 1.71
PNKP-203ENST00000593946 ZPR1O75312 459 aa25.71■■□□□ 1.71
PNKP-203ENST00000593946 USPL1Q5W0Q7 1092 aa25.71■■□□□ 1.71
PNKP-203ENST00000593946 SRP68Q9UHB9 627 aaKnown RBP25.71■■□□□ 1.71
PNKP-203ENST00000593946 PTPN12Q05209 780 aaKnown RBP25.7■■□□□ 1.7
PNKP-203ENST00000593946 TRAPPC3LQ5T215 181 aa25.7■■□□□ 1.7
PNKP-203ENST00000593946 UTP14AQ9BVJ6 771 aaKnown RBP25.7■■□□□ 1.7
PNKP-203ENST00000593946 USP42Q9H9J4 1324 aaKnown RBP25.7■■□□□ 1.7
PNKP-203ENST00000593946 IRS4O14654 1257 aaPredicted RBP25.69■■□□□ 1.7
PNKP-203ENST00000593946 FAM161AQ3B820 660 aa25.69■■□□□ 1.7
PNKP-203ENST00000593946 ERC1Q8IUD2 1116 aa25.69■■□□□ 1.7
PNKP-203ENST00000593946 OTUD7AQ8TE49 926 aaPredicted RBP25.69■■□□□ 1.7
PNKP-203ENST00000593946 BACH2Q9BYV9 841 aa25.69■■□□□ 1.7
PNKP-203ENST00000593946 TUBGCP6Q96RT7 1819 aa25.69■■□□□ 1.7
PNKP-203ENST00000593946 CASZ1Q86V15 1759 aa25.69■■□□□ 1.7
PNKP-203ENST00000593946 NTSR2O95665 410 aa25.68■■□□□ 1.7
PNKP-203ENST00000593946 CSF1RP07333 972 aa25.68■■□□□ 1.7
PNKP-203ENST00000593946 OS9Q13438 667 aaPredicted RBP25.68■■□□□ 1.7
PNKP-203ENST00000593946 C8orf34Q49A92 452 aa25.68■■□□□ 1.7
PNKP-203ENST00000593946 KLHDC4Q8TBB5 520 aa25.68■■□□□ 1.7
PNKP-203ENST00000593946 SH3TC1Q8TE82 1336 aa25.68■■□□□ 1.7
PNKP-203ENST00000593946 SALL3Q9BXA9 1300 aa25.68■■□□□ 1.7
PNKP-203ENST00000593946 PHF14O94880 888 aa25.68■■□□□ 1.7
PNKP-203ENST00000593946 CHMP3Q9Y3E7 222 aa25.68■■□□□ 1.7
PNKP-203ENST00000593946 SSFA2P28290 1259 aa25.67■■□□□ 1.7
PNKP-203ENST00000593946 RFC4P35249 363 aa25.67■■□□□ 1.7
PNKP-203ENST00000593946 G3BP1Q13283 466 aaKnown RBP eCLIP25.67■■□□□ 1.7
PNKP-203ENST00000593946 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.66■■□□□ 1.7
PNKP-203ENST00000593946 TBC1D9BQ66K14 1250 aa25.66■■□□□ 1.7
PNKP-203ENST00000593946 BCL11AQ9H165 835 aa25.66■■□□□ 1.7
PNKP-203ENST00000593946 SIL1Q9H173 461 aa25.66■■□□□ 1.7
PNKP-203ENST00000593946 IL1RAPL2Q9NP60 686 aa25.66■■□□□ 1.7
PNKP-203ENST00000593946 PDE8AO60658 829 aa25.66■■□□□ 1.7
PNKP-203ENST00000593946 CTSWP56202 376 aa25.66■■□□□ 1.7
PNKP-203ENST00000593946 BMP2KLQ5H9B9 411 aa25.66■■□□□ 1.7
PNKP-203ENST00000593946 SASH1O94885 1247 aa25.65■■□□□ 1.7
PNKP-203ENST00000593946 OSBPL3Q9H4L5 887 aa25.65■■□□□ 1.7
PNKP-203ENST00000593946 TTLL11Q8NHH1 800 aa25.64■■□□□ 1.7
PNKP-203ENST00000593946 FAM177BA6PVY3 158 aa25.63■■□□□ 1.69
PNKP-203ENST00000593946 PDE1AP54750 535 aa25.63■■□□□ 1.69
PNKP-203ENST00000593946 TTC22Q5TAA0 569 aa25.62■■□□□ 1.69
PNKP-203ENST00000593946 ILDR1Q86SU0 546 aaPredicted RBP25.62■■□□□ 1.69
PNKP-203ENST00000593946 HSP90B1P14625 803 aaKnown RBP25.61■■□□□ 1.69
PNKP-203ENST00000593946 MX1P20591 662 aa25.61■■□□□ 1.69
PNKP-203ENST00000593946 CCDC57Q2TAC2 916 aa25.61■■□□□ 1.69
PNKP-203ENST00000593946 BICDL1Q6ZP65 573 aa25.61■■□□□ 1.69
PNKP-203ENST00000593946 AKT1S1Q96B36 256 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms