RNA–Protein interactions for RNA: ENST00000590834.5

RUNDC3A-205, Transcript of RUN domain containing 3A, humanhuman

TSL 2

Gene RUNDC3A, Length 2,373 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-205ENST00000590834 EAF2Q96CJ1 260 aaPredicted RBP27.23■■□□□ 1.95
RUNDC3A-205ENST00000590834 MAP3K15Q6ZN16 1313 aa27.22■■□□□ 1.95
RUNDC3A-205ENST00000590834 IFIT2P09913 472 aaKnown RBP27.22■■□□□ 1.95
RUNDC3A-205ENST00000590834 FNBP4Q8N3X1 1017 aaPredicted RBP27.22■■□□□ 1.95
RUNDC3A-205ENST00000590834 REC8O95072 547 aa27.22■■□□□ 1.95
RUNDC3A-205ENST00000590834 MAP4K4O95819 1239 aaPredicted RBP27.22■■□□□ 1.95
RUNDC3A-205ENST00000590834 A0A0G2JS52 829 aa27.21■■□□□ 1.95
RUNDC3A-205ENST00000590834 TRIM28Q13263 835 aaKnown RBP27.21■■□□□ 1.95
RUNDC3A-205ENST00000590834 ESYT1Q9BSJ8 1104 aa27.21■■□□□ 1.95
RUNDC3A-205ENST00000590834 ECHDC1Q9NTX5 307 aa27.21■■□□□ 1.95
RUNDC3A-205ENST00000590834 GLRX3O76003 335 aaKnown RBP27.2■■□□□ 1.95
RUNDC3A-205ENST00000590834 SNX21Q969T3 373 aa27.2■■□□□ 1.95
RUNDC3A-205ENST00000590834 AK9Q5TCS8 1911 aa27.2■■□□□ 1.94
RUNDC3A-205ENST00000590834 SPATA31A6Q5VVP1 1343 aa27.19■■□□□ 1.94
RUNDC3A-205ENST00000590834 GIGYF2Q6Y7W6 1299 aaKnown RBP27.19■■□□□ 1.94
RUNDC3A-205ENST00000590834 HLFQ16534 295 aa27.19■■□□□ 1.94
RUNDC3A-205ENST00000590834 CERKQ8TCT0 537 aa27.19■■□□□ 1.94
RUNDC3A-205ENST00000590834 ARXQ96QS3 562 aa27.19■■□□□ 1.94
RUNDC3A-205ENST00000590834 CCDC8Q9H0W5 538 aaPredicted RBP27.18■■□□□ 1.94
RUNDC3A-205ENST00000590834 GPATCH3Q96I76 525 aa27.17■■□□□ 1.94
RUNDC3A-205ENST00000590834 TLR7Q9NYK1 1049 aaKnown RBP27.17■■□□□ 1.94
RUNDC3A-205ENST00000590834 IL6STP40189 918 aaPredicted RBP27.17■■□□□ 1.94
RUNDC3A-205ENST00000590834 HSCBQ8IWL3 235 aa27.17■■□□□ 1.94
RUNDC3A-205ENST00000590834 CNTROBQ8N137 903 aa27.17■■□□□ 1.94
RUNDC3A-205ENST00000590834 KCNQ2O43526 872 aa27.16■■□□□ 1.94
RUNDC3A-205ENST00000590834 CHMP3Q9Y3E7 222 aa27.16■■□□□ 1.94
RUNDC3A-205ENST00000590834 SLKQ9H2G2 1235 aaPredicted RBP27.15■■□□□ 1.94
RUNDC3A-205ENST00000590834 LOC102724428A0A0B4J2F2 783 aa27.15■■□□□ 1.94
RUNDC3A-205ENST00000590834 ATP6V1AP38606 617 aa27.15■■□□□ 1.94
RUNDC3A-205ENST00000590834 SIK1P57059 783 aa27.15■■□□□ 1.94
RUNDC3A-205ENST00000590834 ANTXR1Q9H6X2 564 aa27.15■■□□□ 1.94
RUNDC3A-205ENST00000590834 TFCP2Q12800 502 aa27.14■■□□□ 1.94
RUNDC3A-205ENST00000590834 IL25Q9H293 177 aa27.14■■□□□ 1.94
RUNDC3A-205ENST00000590834 CICQ96RK0 1608 aaPredicted RBP27.14■■□□□ 1.94
RUNDC3A-205ENST00000590834 CD2BP2O95400 341 aaKnown RBP27.14■■□□□ 1.93
RUNDC3A-205ENST00000590834 PCCAP05165 728 aaPredicted RBP27.14■■□□□ 1.93
RUNDC3A-205ENST00000590834 INTS5Q6P9B9 1019 aaKnown RBP27.14■■□□□ 1.93
RUNDC3A-205ENST00000590834 USP21Q9UK80 565 aa27.14■■□□□ 1.93
RUNDC3A-205ENST00000590834 PALLDQ8WX93 1383 aa27.14■■□□□ 1.93
RUNDC3A-205ENST00000590834 ANKRD36CQ5JPF3 1778 aa27.13■■□□□ 1.93
RUNDC3A-205ENST00000590834 ITPK1Q13572 414 aa27.12■■□□□ 1.93
RUNDC3A-205ENST00000590834 FAM89AQ96GI7 184 aa27.12■■□□□ 1.93
RUNDC3A-205ENST00000590834 HSP90AB3PQ58FF7 597 aa27.12■■□□□ 1.93
RUNDC3A-205ENST00000590834 NLRP10Q86W26 655 aa27.12■■□□□ 1.93
RUNDC3A-205ENST00000590834 DZIP3Q86Y13 1208 aaKnown RBP27.12■■□□□ 1.93
RUNDC3A-205ENST00000590834 ZBTB38Q8NAP3 1195 aaPredicted RBP27.12■■□□□ 1.93
RUNDC3A-205ENST00000590834 TBC1D2BQ9UPU7 963 aa27.12■■□□□ 1.93
RUNDC3A-205ENST00000590834 GPTP24298 496 aa27.11■■□□□ 1.93
RUNDC3A-205ENST00000590834 EIF5P55010 431 aaKnown RBP27.11■■□□□ 1.93
RUNDC3A-205ENST00000590834 TNNI3KQ59H18 835 aa27.11■■□□□ 1.93
RUNDC3A-205ENST00000590834 SPRYD3Q8NCJ5 442 aa27.11■■□□□ 1.93
RUNDC3A-205ENST00000590834 CCDC87Q9NVE4 849 aa27.11■■□□□ 1.93
RUNDC3A-205ENST00000590834 FPGT-TNNI3KV9GXZ4 949 aa27.11■■□□□ 1.93
RUNDC3A-205ENST00000590834 NUP98P52948 1817 aa27.11■■□□□ 1.93
RUNDC3A-205ENST00000590834 ERVV-1B6SEH8 477 aa27.11■■□□□ 1.93
RUNDC3A-205ENST00000590834 CRKLP46109 303 aaKnown RBP27.11■■□□□ 1.93
RUNDC3A-205ENST00000590834 RABEP1Q15276 862 aa27.11■■□□□ 1.93
RUNDC3A-205ENST00000590834 ATG9AQ7Z3C6 839 aa27.11■■□□□ 1.93
RUNDC3A-205ENST00000590834 RREB1Q92766 1687 aa27.11■■□□□ 1.93
RUNDC3A-205ENST00000590834 PLA2G12BQ9BX93 195 aa27.09■■□□□ 1.93
RUNDC3A-205ENST00000590834 ANO2Q9NQ90 1003 aa27.09■■□□□ 1.93
RUNDC3A-205ENST00000590834 DBNLQ9UJU6 430 aaKnown RBP27.09■■□□□ 1.93
RUNDC3A-205ENST00000590834 SMARCC1Q92922 1105 aaPredicted RBP27.08■■□□□ 1.93
RUNDC3A-205ENST00000590834 THSD7AQ9UPZ6 1657 aa27.08■■□□□ 1.93
RUNDC3A-205ENST00000590834 SGSM2O43147 1006 aa27.07■■□□□ 1.92
RUNDC3A-205ENST00000590834 SYNE4Q8N205 404 aa27.07■■□□□ 1.92
RUNDC3A-205ENST00000590834 EVI5LQ96CN4 794 aa27.07■■□□□ 1.92
RUNDC3A-205ENST00000590834 ZNF594Q96JF6 807 aaPredicted RBP27.07■■□□□ 1.92
RUNDC3A-205ENST00000590834 MYH14Q7Z406 1995 aaKnown RBP27.07■■□□□ 1.92
RUNDC3A-205ENST00000590834 CDHR2Q9BYE9 1310 aa27.07■■□□□ 1.92
RUNDC3A-205ENST00000590834 HSPA1LP34931 641 aa27.07■■□□□ 1.92
RUNDC3A-205ENST00000590834 BOLA2Q9H3K6 86 aa27.06■■□□□ 1.92
RUNDC3A-205ENST00000590834 CSF1RP07333 972 aa27.05■■□□□ 1.92
RUNDC3A-205ENST00000590834 LRRC24Q50LG9 513 aa27.05■■□□□ 1.92
RUNDC3A-205ENST00000590834 EYA2O00167 538 aa27.05■■□□□ 1.92
RUNDC3A-205ENST00000590834 IL15P40933 162 aaPredicted RBP27.05■■□□□ 1.92
RUNDC3A-205ENST00000590834 UBN2Q6ZU65 1347 aa27.04■■□□□ 1.92
RUNDC3A-205ENST00000590834 COL5A3P25940 1745 aaPredicted RBP27.04■■□□□ 1.92
RUNDC3A-205ENST00000590834 K7ELQ4 463 aaPredicted RBP27.04■■□□□ 1.92
RUNDC3A-205ENST00000590834 NFKBIBQ15653 356 aa27.04■■□□□ 1.92
RUNDC3A-205ENST00000590834 CWC27Q6UX04 472 aaKnown RBP27.04■■□□□ 1.92
RUNDC3A-205ENST00000590834 ZNF34Q8IZ26 560 aa27.04■■□□□ 1.92
RUNDC3A-205ENST00000590834 EPB41L2O43491 1005 aaKnown RBP27.04■■□□□ 1.92
RUNDC3A-205ENST00000590834 AEBP2Q6ZN18 517 aaPredicted RBP27.04■■□□□ 1.92
RUNDC3A-205ENST00000590834 CIAO1O76071 339 aa27.03■■□□□ 1.92
RUNDC3A-205ENST00000590834 DBNDD2Q9BQY9 259 aa27.03■■□□□ 1.92
RUNDC3A-205ENST00000590834 ZNF831Q5JPB2 1677 aa27.03■■□□□ 1.92
RUNDC3A-205ENST00000590834 CCDC57Q2TAC2 916 aa27.02■■□□□ 1.92
RUNDC3A-205ENST00000590834 PTF1AQ7RTS3 328 aa27.02■■□□□ 1.92
RUNDC3A-205ENST00000590834 PUS3Q9BZE2 481 aaKnown RBP27.02■■□□□ 1.92
RUNDC3A-205ENST00000590834 PALD1Q9ULE6 856 aa27.02■■□□□ 1.92
RUNDC3A-205ENST00000590834 ATP5JP18859 108 aa27.02■■□□□ 1.92
RUNDC3A-205ENST00000590834 DIAPH3Q9NSV4 1193 aa27.02■■□□□ 1.92
RUNDC3A-205ENST00000590834 MEX3CQ5U5Q3 659 aaKnown RBP27.01■■□□□ 1.92
RUNDC3A-205ENST00000590834 CCDC85AQ96PX6 553 aaPredicted RBP27.01■■□□□ 1.92
RUNDC3A-205ENST00000590834 GPR108Q9NPR9 543 aa27.01■■□□□ 1.92
RUNDC3A-205ENST00000590834 TRMT112Q9UI30 125 aaKnown RBP27.01■■□□□ 1.92
RUNDC3A-205ENST00000590834 MCCP23508 829 aa27■■□□□ 1.91
RUNDC3A-205ENST00000590834 CAMTA2O94983 1202 aa27■■□□□ 1.91
RUNDC3A-205ENST00000590834 LSG1Q9H089 658 aaKnown RBP27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms