RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 HDAC9Q9UKV0 1011 aa8.92□□□□□ -0.98
DNMT1-222ENST00000590619 MKI67P46013 3256 aaKnown RBP8.92□□□□□ -0.98
DNMT1-222ENST00000590619 POTEFA5A3E0 1075 aa8.91□□□□□ -0.98
DNMT1-222ENST00000590619 TBC1D8O95759 1140 aa8.91□□□□□ -0.98
DNMT1-222ENST00000590619 GMPSP49915 693 aaPredicted RBP8.91□□□□□ -0.98
DNMT1-222ENST00000590619 FBXO46Q6PJ61 603 aaPredicted RBP8.91□□□□□ -0.98
DNMT1-222ENST00000590619 CLEC4GQ6UXB4 293 aa8.91□□□□□ -0.98
DNMT1-222ENST00000590619 SLC51AQ86UW1 340 aa8.91□□□□□ -0.98
DNMT1-222ENST00000590619 DZIP3Q86Y13 1208 aaKnown RBP8.91□□□□□ -0.98
DNMT1-222ENST00000590619 ZNF496Q96IT1 587 aaPredicted RBP8.91□□□□□ -0.98
DNMT1-222ENST00000590619 TEX13AQ9BXU3 409 aaPredicted RBP8.91□□□□□ -0.98
DNMT1-222ENST00000590619 GBA2Q9HCG7 927 aaPredicted RBP8.91□□□□□ -0.98
DNMT1-222ENST00000590619 SZT2Q5T011 3432 aa8.9□□□□□ -0.98
DNMT1-222ENST00000590619 SHTN1A0MZ66 631 aa8.9□□□□□ -0.98
DNMT1-222ENST00000590619 NIM1KQ8IY84 436 aa8.9□□□□□ -0.98
DNMT1-222ENST00000590619 C2orf69Q8N8R5 385 aa8.9□□□□□ -0.98
DNMT1-222ENST00000590619 TRPM4Q8TD43 1214 aa8.9□□□□□ -0.98
DNMT1-222ENST00000590619 NPC1L1Q9UHC9 1359 aa8.89□□□□□ -0.99
DNMT1-222ENST00000590619 FAM177BA6PVY3 158 aa8.89□□□□□ -0.99
DNMT1-222ENST00000590619 SLC10A3P09131 477 aa8.89□□□□□ -0.99
DNMT1-222ENST00000590619 CRY2Q49AN0 593 aa8.89□□□□□ -0.99
DNMT1-222ENST00000590619 GRIPAP1Q4V328 841 aa8.89□□□□□ -0.99
DNMT1-222ENST00000590619 NPM2Q86SE8 214 aaKnown RBP8.89□□□□□ -0.99
DNMT1-222ENST00000590619 REM2Q8IYK8 340 aaPredicted RBP8.89□□□□□ -0.99
DNMT1-222ENST00000590619 CNOT7Q9UIV1 285 aaKnown RBP8.89□□□□□ -0.99
DNMT1-222ENST00000590619 ZNRF3Q9ULT6 936 aa8.89□□□□□ -0.99
DNMT1-222ENST00000590619 A0A0C4DFX4 3053 aa8.89□□□□□ -0.99
DNMT1-222ENST00000590619 TCERG1O14776 1098 aaKnown RBP8.88□□□□□ -0.99
DNMT1-222ENST00000590619 PPIP5K2O43314 1243 aa8.88□□□□□ -0.99
DNMT1-222ENST00000590619 PIP4K2AP48426 406 aaPredicted RBP8.88□□□□□ -0.99
DNMT1-222ENST00000590619 AOC3Q16853 763 aa8.88□□□□□ -0.99
DNMT1-222ENST00000590619 OTUD5Q96G74 571 aa8.88□□□□□ -0.99
DNMT1-222ENST00000590619 VPS33BQ9H267 617 aa8.88□□□□□ -0.99
DNMT1-222ENST00000590619 NIP7Q9Y221 180 aaKnown RBP eCLIP8.88□□□□□ -0.99
DNMT1-222ENST00000590619 USP16Q9Y5T5 823 aa8.88□□□□□ -0.99
DNMT1-222ENST00000590619 GPR25O00155 361 aa8.87□□□□□ -0.99
DNMT1-222ENST00000590619 EN2P19622 333 aaPredicted RBP8.87□□□□□ -0.99
DNMT1-222ENST00000590619 HOXA10P31260 410 aaPredicted RBP8.87□□□□□ -0.99
DNMT1-222ENST00000590619 IL13P35225 146 aa8.87□□□□□ -0.99
DNMT1-222ENST00000590619 MTHFSDQ2M296 383 aaKnown RBP8.87□□□□□ -0.99
DNMT1-222ENST00000590619 CDCA8Q53HL2 280 aa8.87□□□□□ -0.99
DNMT1-222ENST00000590619 ZNF790Q6PG37 636 aa8.87□□□□□ -0.99
DNMT1-222ENST00000590619 KRT26Q7Z3Y9 468 aa8.87□□□□□ -0.99
DNMT1-222ENST00000590619 TTC5Q8N0Z6 440 aa8.87□□□□□ -0.99
DNMT1-222ENST00000590619 BCL2L13Q9BXK5 485 aa8.87□□□□□ -0.99
DNMT1-222ENST00000590619 HEG1Q9ULI3 1381 aa8.86□□□□□ -0.99
DNMT1-222ENST00000590619 ARFGEF2Q9Y6D5 1785 aa8.86□□□□□ -0.99
DNMT1-222ENST00000590619 H7C1D1 291 aa8.86□□□□□ -0.99
DNMT1-222ENST00000590619 RAD17O75943 681 aa8.86□□□□□ -0.99
DNMT1-222ENST00000590619 GTF2E1P29083 439 aaPredicted RBP8.86□□□□□ -0.99
DNMT1-222ENST00000590619 SAMD7Q7Z3H4 446 aa8.86□□□□□ -0.99
DNMT1-222ENST00000590619 R3HDMLQ9H3Y0 253 aa8.86□□□□□ -0.99
DNMT1-222ENST00000590619 ADM5C9JUS6 153 aa8.85□□□□□ -0.99
DNMT1-222ENST00000590619 KCNQ3O43525 872 aa8.85□□□□□ -0.99
DNMT1-222ENST00000590619 EGFRP00533 1210 aa8.85□□□□□ -0.99
DNMT1-222ENST00000590619 TM4SF4P48230 202 aa8.85□□□□□ -0.99
DNMT1-222ENST00000590619 TNIP1Q15025 636 aa8.85□□□□□ -0.99
DNMT1-222ENST00000590619 HLFQ16534 295 aa8.85□□□□□ -0.99
DNMT1-222ENST00000590619 NOM1Q5C9Z4 860 aaKnown RBP8.85□□□□□ -0.99
DNMT1-222ENST00000590619 INTS3Q68E01 1043 aaKnown RBP8.85□□□□□ -0.99
DNMT1-222ENST00000590619 NUTM1Q86Y26 1132 aa8.85□□□□□ -0.99
DNMT1-222ENST00000590619 RASAL3Q86YV0 1011 aa8.85□□□□□ -0.99
DNMT1-222ENST00000590619 IL17REQ8NFR9 667 aa8.85□□□□□ -0.99
DNMT1-222ENST00000590619 CRAMP1Q96RY5 1269 aa8.85□□□□□ -0.99
DNMT1-222ENST00000590619 ZNF652Q9Y2D9 606 aa8.85□□□□□ -0.99
DNMT1-222ENST00000590619 YDJCA8MPS7 323 aa8.84□□□□□ -0.99
DNMT1-222ENST00000590619 MICALL2Q8IY33 904 aa8.84□□□□□ -0.99
DNMT1-222ENST00000590619 DCPSQ96C86 337 aaKnown RBP8.84□□□□□ -0.99
DNMT1-222ENST00000590619 RTFDC1Q9BY42 306 aaPredicted RBP8.84□□□□□ -0.99
DNMT1-222ENST00000590619 ANKRD26Q9UPS8 1709 aa8.84□□□□□ -0.99
DNMT1-222ENST00000590619 ZBTB12Q9Y330 459 aaPredicted RBP8.84□□□□□ -0.99
DNMT1-222ENST00000590619 KIF20BQ96Q89 1820 aa8.84□□□□□ -0.99
DNMT1-222ENST00000590619 MRC1P22897 1456 aa8.83□□□□□ -1
DNMT1-222ENST00000590619 CDHR2Q9BYE9 1310 aa8.83□□□□□ -1
DNMT1-222ENST00000590619 PRAMEF22A3QJZ6 481 aa8.83□□□□□ -1
DNMT1-222ENST00000590619 H0YGN5 161 aa8.83□□□□□ -1
DNMT1-222ENST00000590619 PPEF1O14829 653 aaPredicted RBP8.83□□□□□ -1
DNMT1-222ENST00000590619 FKTNO75072 461 aa8.83□□□□□ -1
DNMT1-222ENST00000590619 TBC1D10BQ4KMP7 808 aaPredicted RBP8.83□□□□□ -1
DNMT1-222ENST00000590619 RBM26Q5T8P6 1007 aaKnown RBP8.83□□□□□ -1
DNMT1-222ENST00000590619 DPF2Q92785 391 aa8.83□□□□□ -1
DNMT1-222ENST00000590619 RPGRQ92834 1020 aaKnown RBP8.83□□□□□ -1
DNMT1-222ENST00000590619 RBM17Q96I25 401 aaKnown RBP8.83□□□□□ -1
DNMT1-222ENST00000590619 FMNL2Q96PY5 1086 aa8.83□□□□□ -1
DNMT1-222ENST00000590619 SCN11AQ9UI33 1791 aa8.83□□□□□ -1
DNMT1-222ENST00000590619 TRIOBPQ9H2D6 2365 aa8.83□□□□□ -1
DNMT1-222ENST00000590619 KIF7Q2M1P5 1343 aa8.82□□□□□ -1
DNMT1-222ENST00000590619 AKAP11Q9UKA4 1901 aa8.82□□□□□ -1
DNMT1-222ENST00000590619 NBPF26B4DH59 902 aa8.82□□□□□ -1
DNMT1-222ENST00000590619 RGL2O15211 777 aa8.82□□□□□ -1
DNMT1-222ENST00000590619 HMOX1P09601 288 aa8.82□□□□□ -1
DNMT1-222ENST00000590619 MNX1P50219 401 aaPredicted RBP8.82□□□□□ -1
DNMT1-222ENST00000590619 NBPF10Q6P3W6 841 aaKnown RBP8.82□□□□□ -1
DNMT1-222ENST00000590619 SUPT20HQ8NEM7 779 aa8.82□□□□□ -1
DNMT1-222ENST00000590619 RBM27Q9P2N5 1060 aaKnown RBP8.82□□□□□ -1
DNMT1-222ENST00000590619 ATP6V0A2Q9Y487 856 aa8.82□□□□□ -1
DNMT1-222ENST00000590619 BCORQ6W2J9 1755 aa8.81□□□□□ -1
DNMT1-222ENST00000590619 KIAA2012Q0VF49 1180 aa8.81□□□□□ -1
DNMT1-222ENST00000590619 C3orf67Q6ZVT6 689 aa8.81□□□□□ -1
DNMT1-222ENST00000590619 MOB2Q70IA6 237 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms