RNA–Protein interactions for RNA: ENST00000588554.1

GPATCH8-206, Transcript of G-patch domain containing 8, humanhuman

TSL 2

Gene GPATCH8, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-206ENST00000588554 KCNQ3O43525 872 aa10.16□□□□□ -0.78
GPATCH8-206ENST00000588554 ZPR1O75312 459 aa10.16□□□□□ -0.78
GPATCH8-206ENST00000588554 CAMK2BQ13554 666 aa10.16□□□□□ -0.78
GPATCH8-206ENST00000588554 NFIXQ14938 502 aa10.16□□□□□ -0.78
GPATCH8-206ENST00000588554 POTEEQ6S8J3 1075 aa10.16□□□□□ -0.78
GPATCH8-206ENST00000588554 ZNF454Q8N9F8 522 aa10.16□□□□□ -0.78
GPATCH8-206ENST00000588554 ZNF496Q96IT1 587 aaPredicted RBP10.16□□□□□ -0.78
GPATCH8-206ENST00000588554 BICDL1Q6ZP65 573 aa10.15□□□□□ -0.78
GPATCH8-206ENST00000588554 CCDC24Q8N4L8 307 aa10.15□□□□□ -0.78
GPATCH8-206ENST00000588554 NMRK2Q9NPI5 230 aa10.15□□□□□ -0.78
GPATCH8-206ENST00000588554 WDR70Q9NW82 654 aa10.15□□□□□ -0.78
GPATCH8-206ENST00000588554 PIM2Q9P1W9 311 aa10.15□□□□□ -0.78
GPATCH8-206ENST00000588554 NARFQ9UHQ1 456 aa10.15□□□□□ -0.78
GPATCH8-206ENST00000588554 MRC1P22897 1456 aa10.15□□□□□ -0.78
GPATCH8-206ENST00000588554 GNAT3A8MTJ3 354 aa10.14□□□□□ -0.79
GPATCH8-206ENST00000588554 PRKAR2BP31323 418 aa10.14□□□□□ -0.79
GPATCH8-206ENST00000588554 PIP4K2AP48426 406 aaPredicted RBP10.14□□□□□ -0.79
GPATCH8-206ENST00000588554 DALRD3Q5D0E6 543 aaKnown RBP10.14□□□□□ -0.79
GPATCH8-206ENST00000588554 C9orf131Q5VYM1 1079 aa10.14□□□□□ -0.79
GPATCH8-206ENST00000588554 TBC1D2BQ9UPU7 963 aa10.14□□□□□ -0.79
GPATCH8-206ENST00000588554 ZNF330Q9Y3S2 320 aaPredicted RBP10.14□□□□□ -0.79
GPATCH8-206ENST00000588554 COL15A1P39059 1388 aa10.14□□□□□ -0.79
GPATCH8-206ENST00000588554 VIRMAQ69YN4 1812 aaKnown RBP10.13□□□□□ -0.79
GPATCH8-206ENST00000588554 PRAMEF22A3QJZ6 481 aa10.13□□□□□ -0.79
GPATCH8-206ENST00000588554 A1BGP04217 495 aa10.13□□□□□ -0.79
GPATCH8-206ENST00000588554 SERPINB2P05120 415 aa10.13□□□□□ -0.79
GPATCH8-206ENST00000588554 FOSBP53539 338 aa10.13□□□□□ -0.79
GPATCH8-206ENST00000588554 TEFQ10587 303 aa10.13□□□□□ -0.79
GPATCH8-206ENST00000588554 ZNF790Q6PG37 636 aa10.13□□□□□ -0.79
GPATCH8-206ENST00000588554 TTC5Q8N0Z6 440 aa10.13□□□□□ -0.79
GPATCH8-206ENST00000588554 HSPA6P17066 643 aa10.12□□□□□ -0.79
GPATCH8-206ENST00000588554 PPP2R1AP30153 589 aa10.12□□□□□ -0.79
GPATCH8-206ENST00000588554 PRELPP51888 382 aa10.12□□□□□ -0.79
GPATCH8-206ENST00000588554 EIF5P55010 431 aaKnown RBP10.12□□□□□ -0.79
GPATCH8-206ENST00000588554 DCTN1Q14203 1278 aa10.12□□□□□ -0.79
GPATCH8-206ENST00000588554 TBC1D9BQ66K14 1250 aa10.12□□□□□ -0.79
GPATCH8-206ENST00000588554 MCM10Q7L590 875 aa10.12□□□□□ -0.79
GPATCH8-206ENST00000588554 VSIG10Q8N0Z9 540 aa10.12□□□□□ -0.79
GPATCH8-206ENST00000588554 RSPH6AQ9H0K4 717 aa10.12□□□□□ -0.79
GPATCH8-206ENST00000588554 CARMIL3Q8ND23 1372 aa10.12□□□□□ -0.79
GPATCH8-206ENST00000588554 NPC1L1Q9UHC9 1359 aa10.12□□□□□ -0.79
GPATCH8-206ENST00000588554 BRCA1P38398 1863 aaKnown RBP10.11□□□□□ -0.79
GPATCH8-206ENST00000588554 U2AF1L5P0DN76 240 aaPredicted RBP10.11□□□□□ -0.79
GPATCH8-206ENST00000588554 U2AF1Q01081 240 aaKnown RBP eCLIP10.11□□□□□ -0.79
GPATCH8-206ENST00000588554 RASSF7Q02833 373 aa10.11□□□□□ -0.79
GPATCH8-206ENST00000588554 GAS2L2Q8NHY3 880 aa10.11□□□□□ -0.79
GPATCH8-206ENST00000588554 RNF181Q9P0P0 153 aa10.11□□□□□ -0.79
GPATCH8-206ENST00000588554 USP16Q9Y5T5 823 aa10.11□□□□□ -0.79
GPATCH8-206ENST00000588554 HEG1Q9ULI3 1381 aa10.11□□□□□ -0.79
GPATCH8-206ENST00000588554 BTBD11A6QL63 1104 aa10.1□□□□□ -0.79
GPATCH8-206ENST00000588554 STARD3NLO95772 234 aa10.1□□□□□ -0.79
GPATCH8-206ENST00000588554 PSEN2P49810 448 aa10.1□□□□□ -0.79
GPATCH8-206ENST00000588554 C2CD5Q86YS7 1000 aa10.1□□□□□ -0.79
GPATCH8-206ENST00000588554 RRAGCQ9HB90 399 aa10.1□□□□□ -0.79
GPATCH8-206ENST00000588554 MIS18AQ9NYP9 233 aa10.1□□□□□ -0.79
GPATCH8-206ENST00000588554 UBR2Q8IWV8 1755 aa10.1□□□□□ -0.79
GPATCH8-206ENST00000588554 AFDNP55196 1824 aaKnown RBP10.1□□□□□ -0.79
GPATCH8-206ENST00000588554 DPYSL4O14531 572 aa10.09□□□□□ -0.79
GPATCH8-206ENST00000588554 HTRA3P83110 453 aa10.09□□□□□ -0.79
GPATCH8-206ENST00000588554 ZDHHC16Q969W1 377 aa10.09□□□□□ -0.79
GPATCH8-206ENST00000588554 RNF166Q96A37 237 aaPredicted RBP10.09□□□□□ -0.79
GPATCH8-206ENST00000588554 CFAP53Q96M91 514 aa10.09□□□□□ -0.79
GPATCH8-206ENST00000588554 FMNL2Q96PY5 1086 aa10.09□□□□□ -0.79
GPATCH8-206ENST00000588554 KCNK17Q96T54 332 aa10.09□□□□□ -0.79
GPATCH8-206ENST00000588554 CEMIPQ8WUJ3 1361 aa10.09□□□□□ -0.79
GPATCH8-206ENST00000588554 TK2O00142 265 aa10.08□□□□□ -0.8
GPATCH8-206ENST00000588554 TOMM70O94826 608 aa10.08□□□□□ -0.8
GPATCH8-206ENST00000588554 E2F4Q16254 413 aa10.08□□□□□ -0.8
GPATCH8-206ENST00000588554 ADGRD1Q6QNK2 874 aa10.08□□□□□ -0.8
GPATCH8-206ENST00000588554 SIPA1L3O60292 1781 aaPredicted RBP10.08□□□□□ -0.8
GPATCH8-206ENST00000588554 ARFGEF1Q9Y6D6 1849 aa10.07□□□□□ -0.8
GPATCH8-206ENST00000588554 A0A087WZG4 1122 aa10.07□□□□□ -0.8
GPATCH8-206ENST00000588554 H0YIN7 160 aa10.07□□□□□ -0.8
GPATCH8-206ENST00000588554 DMRTA1Q5VZB9 504 aa10.07□□□□□ -0.8
GPATCH8-206ENST00000588554 PRR5LQ6MZQ0 368 aa10.07□□□□□ -0.8
GPATCH8-206ENST00000588554 TTLL6Q8N841 843 aa10.07□□□□□ -0.8
GPATCH8-206ENST00000588554 ZNF622Q969S3 477 aaKnown RBP eCLIP10.07□□□□□ -0.8
GPATCH8-206ENST00000588554 TEX13AQ9BXU3 409 aaPredicted RBP10.07□□□□□ -0.8
GPATCH8-206ENST00000588554 NUDCQ9Y266 331 aa10.07□□□□□ -0.8
GPATCH8-206ENST00000588554 NRXN2Q9P2S2 1712 aa10.07□□□□□ -0.8
GPATCH8-206ENST00000588554 NBPF26B4DH59 902 aa10.06□□□□□ -0.8
GPATCH8-206ENST00000588554 CAMTA2O94983 1202 aa10.06□□□□□ -0.8
GPATCH8-206ENST00000588554 PTPREP23469 700 aa10.06□□□□□ -0.8
GPATCH8-206ENST00000588554 IL6STP40189 918 aaPredicted RBP10.06□□□□□ -0.8
GPATCH8-206ENST00000588554 NBPF10Q6P3W6 841 aaKnown RBP10.06□□□□□ -0.8
GPATCH8-206ENST00000588554 NBPF15Q8N660 670 aa10.06□□□□□ -0.8
GPATCH8-206ENST00000588554 NFKBIEO00221 500 aa10.05□□□□□ -0.8
GPATCH8-206ENST00000588554 C21orf2O43822 256 aa10.05□□□□□ -0.8
GPATCH8-206ENST00000588554 DZIP3Q86Y13 1208 aaKnown RBP10.05□□□□□ -0.8
GPATCH8-206ENST00000588554 DNAJC5GQ8N7S2 189 aa10.05□□□□□ -0.8
GPATCH8-206ENST00000588554 RTF1Q92541 710 aaKnown RBP10.05□□□□□ -0.8
GPATCH8-206ENST00000588554 SETDB2Q96T68 719 aa10.05□□□□□ -0.8
GPATCH8-206ENST00000588554 THUMPD2Q9BTF0 503 aaKnown RBP10.05□□□□□ -0.8
GPATCH8-206ENST00000588554 BRIP1Q9BX63 1249 aa10.05□□□□□ -0.8
GPATCH8-206ENST00000588554 FAM177BA6PVY3 158 aa10.04□□□□□ -0.8
GPATCH8-206ENST00000588554 SNRPA1P09661 255 aaKnown RBP10.04□□□□□ -0.8
GPATCH8-206ENST00000588554 NGEFQ8N5V2 710 aa10.04□□□□□ -0.8
GPATCH8-206ENST00000588554 FBXW7Q969H0 707 aa10.04□□□□□ -0.8
GPATCH8-206ENST00000588554 TSHZ2Q9NRE2 1034 aa10.04□□□□□ -0.8
GPATCH8-206ENST00000588554 PCDHGA10Q9Y5H3 936 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms