RNA–Protein interactions for RNA: ENST00000586443.1

GRN-205, Transcript of granulin precursor, humanhuman

TSL 3

Gene GRN, Length 1,557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-205ENST00000586443 BCL11BQ9C0K0 894 aaPredicted RBP23.23■■□□□ 1.31
GRN-205ENST00000586443 COPRSQ9NQ92 184 aa23.23■■□□□ 1.31
GRN-205ENST00000586443 AOX1Q06278 1338 aa23.23■■□□□ 1.31
GRN-205ENST00000586443 BRWD3Q6RI45 1802 aa23.23■■□□□ 1.31
GRN-205ENST00000586443 GSPT1P15170 499 aaKnown RBP23.23■■□□□ 1.31
GRN-205ENST00000586443 OS9Q13438 667 aaPredicted RBP23.23■■□□□ 1.31
GRN-205ENST00000586443 RC3H1Q5TC82 1133 aaKnown RBP23.23■■□□□ 1.31
GRN-205ENST00000586443 STAP2Q9UGK3 403 aa23.23■■□□□ 1.31
GRN-205ENST00000586443 TBC1D2BQ9UPU7 963 aa23.23■■□□□ 1.31
GRN-205ENST00000586443 MX1P20591 662 aa23.22■■□□□ 1.31
GRN-205ENST00000586443 ANP32AP39687 249 aaKnown RBP23.22■■□□□ 1.31
GRN-205ENST00000586443 RFX5P48382 616 aaPredicted RBP23.22■■□□□ 1.31
GRN-205ENST00000586443 RBM6P78332 1123 aaKnown RBP23.22■■□□□ 1.31
GRN-205ENST00000586443 FAM196AQ6ZSG2 479 aa23.22■■□□□ 1.31
GRN-205ENST00000586443 KRT27Q7Z3Y8 459 aa23.22■■□□□ 1.31
GRN-205ENST00000586443 NLRP10Q86W26 655 aa23.22■■□□□ 1.31
GRN-205ENST00000586443 ZBTB38Q8NAP3 1195 aaPredicted RBP23.22■■□□□ 1.31
GRN-205ENST00000586443 PA2G4Q9UQ80 394 aaKnown RBP23.22■■□□□ 1.31
GRN-205ENST00000586443 CDHR2Q9BYE9 1310 aa23.21■■□□□ 1.31
GRN-205ENST00000586443 RGL2O15211 777 aa23.21■■□□□ 1.31
GRN-205ENST00000586443 G3BP1Q13283 466 aaKnown RBP eCLIP23.21■■□□□ 1.31
GRN-205ENST00000586443 ZNF34Q8IZ26 560 aa23.21■■□□□ 1.31
GRN-205ENST00000586443 PLA2G12BQ9BX93 195 aa23.21■■□□□ 1.31
GRN-205ENST00000586443 BCORQ6W2J9 1755 aa23.21■■□□□ 1.31
GRN-205ENST00000586443 IL1RAPL2Q9NP60 686 aa23.2■■□□□ 1.3
GRN-205ENST00000586443 CAMTA2O94983 1202 aa23.19■■□□□ 1.3
GRN-205ENST00000586443 LMBR1LQ6UX01 489 aa23.19■■□□□ 1.3
GRN-205ENST00000586443 CCNL1Q9UK58 526 aaPredicted RBP23.19■■□□□ 1.3
GRN-205ENST00000586443 CLASRPQ8N2M8 674 aaKnown RBP23.18■■□□□ 1.3
GRN-205ENST00000586443 TAF1LQ8IZX4 1826 aa23.18■■□□□ 1.3
GRN-205ENST00000586443 SEC24BO95487 1268 aa23.18■■□□□ 1.3
GRN-205ENST00000586443 PTPN12Q05209 780 aaKnown RBP23.18■■□□□ 1.3
GRN-205ENST00000586443 BCL11AQ9H165 835 aa23.18■■□□□ 1.3
GRN-205ENST00000586443 TUBGCP6Q96RT7 1819 aa23.17■■□□□ 1.3
GRN-205ENST00000586443 CDC45O75419 566 aa23.17■■□□□ 1.3
GRN-205ENST00000586443 GPTP24298 496 aa23.17■■□□□ 1.3
GRN-205ENST00000586443 UPF2Q9HAU5 1272 aaKnown RBP23.17■■□□□ 1.3
GRN-205ENST00000586443 RTL5Q5HYW3 569 aaPredicted RBP23.16■■□□□ 1.3
GRN-205ENST00000586443 ZNF652Q9Y2D9 606 aa23.16■■□□□ 1.3
GRN-205ENST00000586443 USP42Q9H9J4 1324 aaKnown RBP23.16■■□□□ 1.3
GRN-205ENST00000586443 EIF5BO60841 1220 aaKnown RBP23.15■■□□□ 1.3
GRN-205ENST00000586443 RPS6KA4O75676 772 aa23.15■■□□□ 1.3
GRN-205ENST00000586443 SASH1O94885 1247 aa23.15■■□□□ 1.3
GRN-205ENST00000586443 PARP10Q53GL7 1025 aa23.15■■□□□ 1.3
GRN-205ENST00000586443 CLEC4GQ6UXB4 293 aa23.15■■□□□ 1.3
GRN-205ENST00000586443 UBN2Q6ZU65 1347 aa23.15■■□□□ 1.3
GRN-205ENST00000586443 SCN7AQ01118 1682 aa23.14■■□□□ 1.3
GRN-205ENST00000586443 SDSP20132 328 aa23.14■■□□□ 1.3
GRN-205ENST00000586443 FAM89AQ96GI7 184 aa23.14■■□□□ 1.3
GRN-205ENST00000586443 KLHDC4Q8TBB5 520 aa23.14■■□□□ 1.29
GRN-205ENST00000586443 TRMT112Q9UI30 125 aaKnown RBP23.14■■□□□ 1.29
GRN-205ENST00000586443 TTC41PQ6P2S7 1318 aa23.14■■□□□ 1.29
GRN-205ENST00000586443 CSF1RP07333 972 aa23.13■■□□□ 1.29
GRN-205ENST00000586443 KCNQ4P56696 695 aa23.13■■□□□ 1.29
GRN-205ENST00000586443 NUTM1Q86Y26 1132 aa23.13■■□□□ 1.29
GRN-205ENST00000586443 AK7Q96M32 723 aa23.13■■□□□ 1.29
GRN-205ENST00000586443 SIL1Q9H173 461 aa23.13■■□□□ 1.29
GRN-205ENST00000586443 C4BP0C0L5 1744 aa23.12■■□□□ 1.29
GRN-205ENST00000586443 TBC1D9Q6ZT07 1266 aa23.12■■□□□ 1.29
GRN-205ENST00000586443 CHMP3Q9Y3E7 222 aa23.12■■□□□ 1.29
GRN-205ENST00000586443 MYH3P11055 1940 aa23.11■■□□□ 1.29
GRN-205ENST00000586443 FBXO3Q9UK99 471 aa23.11■■□□□ 1.29
GRN-205ENST00000586443 IFIT2P09913 472 aaKnown RBP23.1■■□□□ 1.29
GRN-205ENST00000586443 GPATCH3Q96I76 525 aa23.1■■□□□ 1.29
GRN-205ENST00000586443 IRS4O14654 1257 aaPredicted RBP23.1■■□□□ 1.29
GRN-205ENST00000586443 CIAO1O76071 339 aa23.1■■□□□ 1.29
GRN-205ENST00000586443 PI4K2BQ8TCG2 481 aa23.1■■□□□ 1.29
GRN-205ENST00000586443 SH3TC1Q8TE82 1336 aa23.09■■□□□ 1.29
GRN-205ENST00000586443 PDE8AO60658 829 aa23.09■■□□□ 1.29
GRN-205ENST00000586443 HMGB2P26583 209 aaKnown RBP23.09■■□□□ 1.29
GRN-205ENST00000586443 CCDC57Q2TAC2 916 aa23.09■■□□□ 1.29
GRN-205ENST00000586443 SLC27A3Q5K4L6 730 aa23.09■■□□□ 1.29
GRN-205ENST00000586443 TSHZ3Q63HK5 1081 aa23.09■■□□□ 1.29
GRN-205ENST00000586443 CASC1Q6TDU7 716 aa23.09■■□□□ 1.29
GRN-205ENST00000586443 AACSQ86V21 672 aa23.09■■□□□ 1.29
GRN-205ENST00000586443 TBC1D32Q96NH3 1257 aa23.09■■□□□ 1.29
GRN-205ENST00000586443 UTP14AQ9BVJ6 771 aaKnown RBP23.09■■□□□ 1.29
GRN-205ENST00000586443 NARFQ9UHQ1 456 aa23.09■■□□□ 1.29
GRN-205ENST00000586443 RTCBQ9Y3I0 505 aaKnown RBP23.09■■□□□ 1.29
GRN-205ENST00000586443 ERC2O15083 957 aa23.08■■□□□ 1.29
GRN-205ENST00000586443 GNPATO15228 680 aa23.08■■□□□ 1.29
GRN-205ENST00000586443 HSP90B1P14625 803 aaKnown RBP23.08■■□□□ 1.29
GRN-205ENST00000586443 RXRBP28702 533 aa23.08■■□□□ 1.29
GRN-205ENST00000586443 IL15P40933 162 aaPredicted RBP23.08■■□□□ 1.29
GRN-205ENST00000586443 CTSWP56202 376 aa23.08■■□□□ 1.29
GRN-205ENST00000586443 SUSD4Q5VX71 490 aa23.08■■□□□ 1.29
GRN-205ENST00000586443 EAF2Q96CJ1 260 aaPredicted RBP23.08■■□□□ 1.29
GRN-205ENST00000586443 NIP7Q9Y221 180 aaKnown RBP eCLIP23.08■■□□□ 1.291e-6■■□□□ 11.8
GRN-205ENST00000586443 LAMB2P55268 1798 aa23.08■■□□□ 1.29
GRN-205ENST00000586443 EYA2O00167 538 aa23.07■■□□□ 1.28
GRN-205ENST00000586443 GLRX3O76003 335 aaKnown RBP23.07■■□□□ 1.28
GRN-205ENST00000586443 MFAP1P55081 439 aaKnown RBP23.07■■□□□ 1.28
GRN-205ENST00000586443 IPO9Q96P70 1041 aaKnown RBP23.07■■□□□ 1.28
GRN-205ENST00000586443 ECHDC1Q9NTX5 307 aa23.07■■□□□ 1.28
GRN-205ENST00000586443 ATG9AQ7Z3C6 839 aa23.06■■□□□ 1.28
GRN-205ENST00000586443 SYNE4Q8N205 404 aa23.06■■□□□ 1.28
GRN-205ENST00000586443 TTLL11Q8NHH1 800 aa23.06■■□□□ 1.28
GRN-205ENST00000586443 DDRGK1Q96HY6 314 aa23.06■■□□□ 1.28
GRN-205ENST00000586443 TRIM37O94972 964 aa23.06■■□□□ 1.28
GRN-205ENST00000586443 IFIT5Q13325 482 aaKnown RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms