RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 ISCA1Q9BUE6 129 aa13.54□□□□□ -0.24
SKA2-204ENST00000578519 HSP90AA1P07900 732 aaKnown RBP13.53□□□□□ -0.24
SKA2-204ENST00000578519 CHMLP26374 656 aa13.53□□□□□ -0.24
SKA2-204ENST00000578519 PIP4K2AP48426 406 aaPredicted RBP13.53□□□□□ -0.24
SKA2-204ENST00000578519 SLC4A3P48751 1232 aa13.53□□□□□ -0.24
SKA2-204ENST00000578519 MCM2P49736 904 aa13.53□□□□□ -0.24
SKA2-204ENST00000578519 ANAPC15P60006 121 aa13.53□□□□□ -0.24
SKA2-204ENST00000578519 GIGYF2Q6Y7W6 1299 aaKnown RBP13.53□□□□□ -0.24
SKA2-204ENST00000578519 EVI5LQ96CN4 794 aa13.53□□□□□ -0.24
SKA2-204ENST00000578519 KAZALD1Q96I82 304 aa13.53□□□□□ -0.24
SKA2-204ENST00000578519 ARXQ96QS3 562 aa13.53□□□□□ -0.24
SKA2-204ENST00000578519 ZBTB3Q9H5J0 574 aa13.53□□□□□ -0.24
SKA2-204ENST00000578519 MAP3K15Q6ZN16 1313 aa13.53□□□□□ -0.24
SKA2-204ENST00000578519 SLIT2O94813 1529 aa13.53□□□□□ -0.24
SKA2-204ENST00000578519 NWD2Q9ULI1 1742 aa13.53□□□□□ -0.24
SKA2-204ENST00000578519 PCCAP05165 728 aaPredicted RBP13.52□□□□□ -0.25
SKA2-204ENST00000578519 CYP19A1P11511 503 aaPredicted RBP13.52□□□□□ -0.25
SKA2-204ENST00000578519 LMBR1LQ6UX01 489 aa13.52□□□□□ -0.25
SKA2-204ENST00000578519 GPR108Q9NPR9 543 aa13.52□□□□□ -0.25
SKA2-204ENST00000578519 DIAPH3Q9NSV4 1193 aa13.52□□□□□ -0.25
SKA2-204ENST00000578519 PA2G4Q9UQ80 394 aaKnown RBP13.52□□□□□ -0.25
SKA2-204ENST00000578519 CHMP3Q9Y3E7 222 aa13.52□□□□□ -0.25
SKA2-204ENST00000578519 ZNF330Q9Y3S2 320 aaPredicted RBP13.52□□□□□ -0.25
SKA2-204ENST00000578519 SHANK3Q9BYB0 1731 aa13.52□□□□□ -0.25
SKA2-204ENST00000578519 HMGB2P26583 209 aaKnown RBP13.51□□□□□ -0.25
SKA2-204ENST00000578519 IL15P40933 162 aaPredicted RBP13.51□□□□□ -0.25
SKA2-204ENST00000578519 CASP7P55210 303 aa13.51□□□□□ -0.25
SKA2-204ENST00000578519 CCDC57Q2TAC2 916 aa13.51□□□□□ -0.25
SKA2-204ENST00000578519 ZBTB38Q8NAP3 1195 aaPredicted RBP13.51□□□□□ -0.25
SKA2-204ENST00000578519 PI4K2BQ8TCG2 481 aa13.51□□□□□ -0.25
SKA2-204ENST00000578519 PLA2G12BQ9BX93 195 aa13.51□□□□□ -0.25
SKA2-204ENST00000578519 CHMP5Q9NZZ3 219 aa13.51□□□□□ -0.25
SKA2-204ENST00000578519 ZNF219Q9P2Y4 722 aaPredicted RBP13.51□□□□□ -0.25
SKA2-204ENST00000578519 A0A0G2JS52 829 aa13.5□□□□□ -0.25
SKA2-204ENST00000578519 CIAO1O76071 339 aa13.5□□□□□ -0.25
SKA2-204ENST00000578519 AK7Q96M32 723 aa13.5□□□□□ -0.25
SKA2-204ENST00000578519 CIZ1Q9ULV3 898 aaPredicted RBP13.5□□□□□ -0.25
SKA2-204ENST00000578519 AKAP2Q9Y2D5 859 aa13.5□□□□□ -0.25
SKA2-204ENST00000578519 CDHR2Q9BYE9 1310 aa13.49□□□□□ -0.25
SKA2-204ENST00000578519 K7ELQ4 463 aaPredicted RBP13.49□□□□□ -0.25
SKA2-204ENST00000578519 SASH1O94885 1247 aa13.49□□□□□ -0.25
SKA2-204ENST00000578519 RFX5P48382 616 aaPredicted RBP13.49□□□□□ -0.25
SKA2-204ENST00000578519 FOXO4P98177 505 aa13.49□□□□□ -0.25
SKA2-204ENST00000578519 PTPN12Q05209 780 aaKnown RBP13.49□□□□□ -0.25
SKA2-204ENST00000578519 LRRFIP1Q32MZ4 808 aaKnown RBP13.49□□□□□ -0.25
SKA2-204ENST00000578519 TAF7LQ5H9L4 462 aa13.49□□□□□ -0.25
SKA2-204ENST00000578519 FNBP4Q8N3X1 1017 aaPredicted RBP13.49□□□□□ -0.25
SKA2-204ENST00000578519 C8orf37Q96NL8 207 aa13.49□□□□□ -0.25
SKA2-204ENST00000578519 SIL1Q9H173 461 aa13.49□□□□□ -0.25
SKA2-204ENST00000578519 ANO2Q9NQ90 1003 aa13.49□□□□□ -0.25
SKA2-204ENST00000578519 CCDC87Q9NVE4 849 aa13.49□□□□□ -0.25
SKA2-204ENST00000578519 ATP6V1AP38606 617 aa13.48□□□□□ -0.25
SKA2-204ENST00000578519 NBR1Q14596 966 aa13.48□□□□□ -0.25
SKA2-204ENST00000578519 EPHA10Q5JZY3 1008 aa13.48□□□□□ -0.25
SKA2-204ENST00000578519 MEX3CQ5U5Q3 659 aaKnown RBP13.48□□□□□ -0.25
SKA2-204ENST00000578519 DZIP3Q86Y13 1208 aaKnown RBP13.48□□□□□ -0.25
SKA2-204ENST00000578519 MARCH10Q8NA82 808 aaPredicted RBP13.48□□□□□ -0.25
SKA2-204ENST00000578519 ZNF652Q9Y2D9 606 aa13.48□□□□□ -0.25
SKA2-204ENST00000578519 GLI3P10071 1580 aa13.48□□□□□ -0.25
SKA2-204ENST00000578519 ARFGEF2Q9Y6D5 1785 aa13.48□□□□□ -0.25
SKA2-204ENST00000578519 NRAPQ86VF7 1730 aa13.47□□□□□ -0.25
SKA2-204ENST00000578519 RAD50Q92878 1312 aa13.47□□□□□ -0.25
SKA2-204ENST00000578519 EYA2O00167 538 aa13.47□□□□□ -0.25
SKA2-204ENST00000578519 RGL2O15211 777 aa13.47□□□□□ -0.25
SKA2-204ENST00000578519 ATP5JP18859 108 aa13.47□□□□□ -0.25
SKA2-204ENST00000578519 PARP10Q53GL7 1025 aa13.47□□□□□ -0.25
SKA2-204ENST00000578519 TNNI3KQ59H18 835 aa13.47□□□□□ -0.25
SKA2-204ENST00000578519 TSHZ3Q63HK5 1081 aa13.47□□□□□ -0.25
SKA2-204ENST00000578519 CERKQ8TCT0 537 aa13.47□□□□□ -0.25
SKA2-204ENST00000578519 EAF2Q96CJ1 260 aaPredicted RBP13.47□□□□□ -0.25
SKA2-204ENST00000578519 CEP126Q9P2H0 1117 aa13.47□□□□□ -0.25
SKA2-204ENST00000578519 FPGT-TNNI3KV9GXZ4 949 aa13.47□□□□□ -0.25
SKA2-204ENST00000578519 TOGARAM1Q9Y4F4 1720 aa13.47□□□□□ -0.25
SKA2-204ENST00000578519 LOC102724428A0A0B4J2F2 783 aa13.46□□□□□ -0.25
SKA2-204ENST00000578519 SGSM2O43147 1006 aa13.46□□□□□ -0.25
SKA2-204ENST00000578519 PTMSP20962 102 aa13.46□□□□□ -0.25
SKA2-204ENST00000578519 SIK1P57059 783 aa13.46□□□□□ -0.25
SKA2-204ENST00000578519 IFIT5Q13325 482 aaKnown RBP13.46□□□□□ -0.25
SKA2-204ENST00000578519 CCDC8Q9H0W5 538 aaPredicted RBP13.46□□□□□ -0.25
SKA2-204ENST00000578519 CWC22Q9HCG8 908 aaKnown RBP13.46□□□□□ -0.25
SKA2-204ENST00000578519 USP21Q9UK80 565 aa13.46□□□□□ -0.25
SKA2-204ENST00000578519 WNK3Q9BYP7 1800 aa13.46□□□□□ -0.26
SKA2-204ENST00000578519 TFCP2Q12800 502 aa13.45□□□□□ -0.26
SKA2-204ENST00000578519 FAM98CQ17RN3 349 aaKnown RBP13.45□□□□□ -0.26
SKA2-204ENST00000578519 NLRP10Q86W26 655 aa13.45□□□□□ -0.26
SKA2-204ENST00000578519 ACSBG1Q96GR2 724 aa13.45□□□□□ -0.26
SKA2-204ENST00000578519 KIF2CQ99661 725 aa13.45□□□□□ -0.26
SKA2-204ENST00000578519 SLKQ9H2G2 1235 aaPredicted RBP13.45□□□□□ -0.26
SKA2-204ENST00000578519 ZBTB1Q9Y2K1 713 aa13.45□□□□□ -0.26
SKA2-204ENST00000578519 AFDNP55196 1824 aaKnown RBP13.45□□□□□ -0.26
SKA2-204ENST00000578519 RFX7Q2KHR2 1363 aa13.45□□□□□ -0.26
SKA2-204ENST00000578519 ITGB4P16144 1822 aa13.44□□□□□ -0.26
SKA2-204ENST00000578519 ANKRD18BA2A2Z9 1011 aa13.44□□□□□ -0.26
SKA2-204ENST00000578519 PDE8AO60658 829 aa13.44□□□□□ -0.26
SKA2-204ENST00000578519 CSF1RP07333 972 aa13.44□□□□□ -0.26
SKA2-204ENST00000578519 EIF5P55010 431 aaKnown RBP13.44□□□□□ -0.26
SKA2-204ENST00000578519 NFKBIBQ15653 356 aa13.44□□□□□ -0.26
SKA2-204ENST00000578519 JARID2Q92833 1246 aaPredicted RBP13.44□□□□□ -0.26
SKA2-204ENST00000578519 IL17RAQ96F46 866 aa13.44□□□□□ -0.26
SKA2-204ENST00000578519 FSD1Q9BTV5 496 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms