RNA–Protein interactions for RNA: ENST00000575338.1

SMG6-217, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-217ENST00000575338 PDIA4P13667 645 aaKnown RBP8.23□□□□□ -1.09
SMG6-217ENST00000575338 IL15P40933 162 aaPredicted RBP8.23□□□□□ -1.09
SMG6-217ENST00000575338 TCIRG1Q13488 830 aa8.23□□□□□ -1.09
SMG6-217ENST00000575338 DDB1Q16531 1140 aa8.23□□□□□ -1.09
SMG6-217ENST00000575338 SKOR2Q2VWA4 1001 aaPredicted RBP8.23□□□□□ -1.09
SMG6-217ENST00000575338 RNF20Q5VTR2 975 aa8.23□□□□□ -1.09
SMG6-217ENST00000575338 BARGINQ6ZT62 677 aa8.23□□□□□ -1.09
SMG6-217ENST00000575338 ILDR2Q71H61 639 aa8.23□□□□□ -1.09
SMG6-217ENST00000575338 SMARCC1Q92922 1105 aaPredicted RBP8.23□□□□□ -1.09
SMG6-217ENST00000575338 RREB1Q92766 1687 aa8.23□□□□□ -1.09
SMG6-217ENST00000575338 NBPF26B4DH59 902 aa8.22□□□□□ -1.09
SMG6-217ENST00000575338 ERVV-1B6SEH8 477 aa8.22□□□□□ -1.09
SMG6-217ENST00000575338 SGSM2O43147 1006 aa8.22□□□□□ -1.09
SMG6-217ENST00000575338 ZKSCAN1P17029 563 aaPredicted RBP8.22□□□□□ -1.09
SMG6-217ENST00000575338 IL6STP40189 918 aaPredicted RBP8.22□□□□□ -1.09
SMG6-217ENST00000575338 NBPF14Q5TI25 921 aa8.22□□□□□ -1.09
SMG6-217ENST00000575338 NBPF10Q6P3W6 841 aaKnown RBP8.22□□□□□ -1.09
SMG6-217ENST00000575338 NBPF15Q8N660 670 aa8.22□□□□□ -1.09
SMG6-217ENST00000575338 PIGBQ92521 554 aa8.22□□□□□ -1.09
SMG6-217ENST00000575338 KAZALD1Q96I82 304 aa8.22□□□□□ -1.09
SMG6-217ENST00000575338 AK7Q96M32 723 aa8.22□□□□□ -1.09
SMG6-217ENST00000575338 RBM42Q9BTD8 480 aaKnown RBP8.22□□□□□ -1.09
SMG6-217ENST00000575338 AKAP2Q9Y2D5 859 aa8.22□□□□□ -1.09
SMG6-217ENST00000575338 MYH7P12883 1935 aa8.22□□□□□ -1.09
SMG6-217ENST00000575338 SPATA31A1Q5TZJ5 1347 aa8.22□□□□□ -1.09
SMG6-217ENST00000575338 MAP3K15Q6ZN16 1313 aa8.22□□□□□ -1.09
SMG6-217ENST00000575338 CDHR2Q9BYE9 1310 aa8.22□□□□□ -1.09
SMG6-217ENST00000575338 LAMB2P55268 1798 aa8.22□□□□□ -1.09
SMG6-217ENST00000575338 SLIT2O94813 1529 aa8.21□□□□□ -1.1
SMG6-217ENST00000575338 ATP5J2-PTCD1G3V325 749 aa8.21□□□□□ -1.1
SMG6-217ENST00000575338 SASH1O94885 1247 aa8.21□□□□□ -1.1
SMG6-217ENST00000575338 A1BGP04217 495 aa8.21□□□□□ -1.1
SMG6-217ENST00000575338 PCCAP05165 728 aaPredicted RBP8.21□□□□□ -1.1
SMG6-217ENST00000575338 ATP5JP18859 108 aa8.21□□□□□ -1.1
SMG6-217ENST00000575338 HSPA4P34932 840 aa8.21□□□□□ -1.1
SMG6-217ENST00000575338 DEKP35659 375 aaKnown RBP8.21□□□□□ -1.1
SMG6-217ENST00000575338 CASP7P55210 303 aa8.21□□□□□ -1.1
SMG6-217ENST00000575338 PTPN12Q05209 780 aaKnown RBP8.21□□□□□ -1.1
SMG6-217ENST00000575338 GSE1Q14687 1217 aa8.21□□□□□ -1.1
SMG6-217ENST00000575338 CCDC57Q2TAC2 916 aa8.21□□□□□ -1.1
SMG6-217ENST00000575338 TNNI3KQ59H18 835 aa8.21□□□□□ -1.1
SMG6-217ENST00000575338 GIGYF2Q6Y7W6 1299 aaKnown RBP8.21□□□□□ -1.1
SMG6-217ENST00000575338 INTS4Q96HW7 963 aaKnown RBP8.21□□□□□ -1.1
SMG6-217ENST00000575338 ISCA1Q9BUE6 129 aa8.21□□□□□ -1.1
SMG6-217ENST00000575338 PLA2G12BQ9BX93 195 aa8.21□□□□□ -1.1
SMG6-217ENST00000575338 PA2G4Q9UQ80 394 aaKnown RBP8.21□□□□□ -1.1
SMG6-217ENST00000575338 CHMP3Q9Y3E7 222 aa8.21□□□□□ -1.1
SMG6-217ENST00000575338 FPGT-TNNI3KV9GXZ4 949 aa8.21□□□□□ -1.1
SMG6-217ENST00000575338 ABCC12Q96J65 1359 aa8.21□□□□□ -1.1
SMG6-217ENST00000575338 FRAT2O75474 233 aaPredicted RBP8.2□□□□□ -1.1
SMG6-217ENST00000575338 HMGB2P26583 209 aaKnown RBP8.2□□□□□ -1.1
SMG6-217ENST00000575338 PSMA5P28066 241 aa8.2□□□□□ -1.1
SMG6-217ENST00000575338 MCM4P33991 863 aa8.2□□□□□ -1.1
SMG6-217ENST00000575338 DDIT3P35638 169 aa8.2□□□□□ -1.1
SMG6-217ENST00000575338 RFX5P48382 616 aaPredicted RBP8.2□□□□□ -1.1
SMG6-217ENST00000575338 NEK4P51957 841 aa8.2□□□□□ -1.1
SMG6-217ENST00000575338 RAB3GAP1Q15042 981 aa8.2□□□□□ -1.1
SMG6-217ENST00000575338 TAF7LQ5H9L4 462 aa8.2□□□□□ -1.1
SMG6-217ENST00000575338 TSHZ3Q63HK5 1081 aa8.2□□□□□ -1.1
SMG6-217ENST00000575338 LMBR1LQ6UX01 489 aa8.2□□□□□ -1.1
SMG6-217ENST00000575338 TTLL7Q6ZT98 887 aa8.2□□□□□ -1.1
SMG6-217ENST00000575338 DNAJC10Q8IXB1 793 aa8.2□□□□□ -1.1
SMG6-217ENST00000575338 ZBTB38Q8NAP3 1195 aaPredicted RBP8.2□□□□□ -1.1
SMG6-217ENST00000575338 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.2□□□□□ -1.1
SMG6-217ENST00000575338 EAF2Q96CJ1 260 aaPredicted RBP8.2□□□□□ -1.1
SMG6-217ENST00000575338 FSD1Q9BTV5 496 aa8.2□□□□□ -1.1
SMG6-217ENST00000575338 TM6SF1Q9BZW5 370 aa8.2□□□□□ -1.1
SMG6-217ENST00000575338 SIL1Q9H173 461 aa8.2□□□□□ -1.1
SMG6-217ENST00000575338 ZBTB3Q9H5J0 574 aa8.2□□□□□ -1.1
SMG6-217ENST00000575338 HMG20BQ9P0W2 317 aa8.2□□□□□ -1.1
SMG6-217ENST00000575338 ISY1Q9ULR0 285 aaKnown RBP8.2□□□□□ -1.1
SMG6-217ENST00000575338 SPATA31A5Q5VU36 1347 aa8.2□□□□□ -1.1
SMG6-217ENST00000575338 SPATA31A7Q8IWB4 1347 aa8.2□□□□□ -1.1
SMG6-217ENST00000575338 JCADQ9P266 1359 aa8.2□□□□□ -1.1
SMG6-217ENST00000575338 COL5A3P25940 1745 aaPredicted RBP8.2□□□□□ -1.1
SMG6-217ENST00000575338 EYA2O00167 538 aa8.19□□□□□ -1.1
SMG6-217ENST00000575338 RGL2O15211 777 aa8.19□□□□□ -1.1
SMG6-217ENST00000575338 KCNJ4P48050 445 aa8.19□□□□□ -1.1
SMG6-217ENST00000575338 FOXO4P98177 505 aa8.19□□□□□ -1.1
SMG6-217ENST00000575338 KRT32Q14532 448 aa8.19□□□□□ -1.1
SMG6-217ENST00000575338 CWC27Q6UX04 472 aaKnown RBP8.19□□□□□ -1.1
SMG6-217ENST00000575338 SPRYD3Q8NCJ5 442 aa8.19□□□□□ -1.1
SMG6-217ENST00000575338 SYTL4Q96C24 671 aaPredicted RBP8.19□□□□□ -1.1
SMG6-217ENST00000575338 SNRKQ9NRH2 765 aa8.19□□□□□ -1.1
SMG6-217ENST00000575338 CEP126Q9P2H0 1117 aa8.19□□□□□ -1.1
SMG6-217ENST00000575338 ASAP1Q9ULH1 1129 aa8.19□□□□□ -1.1
SMG6-217ENST00000575338 ZNF652Q9Y2D9 606 aa8.19□□□□□ -1.1
SMG6-217ENST00000575338 BCORQ6W2J9 1755 aa8.19□□□□□ -1.1
SMG6-217ENST00000575338 ARAP2Q8WZ64 1704 aa8.18□□□□□ -1.1
SMG6-217ENST00000575338 ADAMTS2O95450 1211 aa8.18□□□□□ -1.1
SMG6-217ENST00000575338 CYP19A1P11511 503 aaPredicted RBP8.18□□□□□ -1.1
SMG6-217ENST00000575338 PIP4K2AP48426 406 aaPredicted RBP8.18□□□□□ -1.1
SMG6-217ENST00000575338 IFIT5Q13325 482 aaKnown RBP8.18□□□□□ -1.1
SMG6-217ENST00000575338 ANKRD1Q15327 319 aa8.18□□□□□ -1.1
SMG6-217ENST00000575338 PARP10Q53GL7 1025 aa8.18□□□□□ -1.1
SMG6-217ENST00000575338 EPHA10Q5JZY3 1008 aa8.18□□□□□ -1.1
SMG6-217ENST00000575338 CCDC158Q5M9N0 1113 aa8.18□□□□□ -1.1
SMG6-217ENST00000575338 L1TD1Q5T7N2 865 aaKnown RBP8.18□□□□□ -1.1
SMG6-217ENST00000575338 CLEC17AQ6ZS10 378 aa8.18□□□□□ -1.1
SMG6-217ENST00000575338 UNC5CLQ8IV45 518 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms