RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 CTAGE15A4D2H0 777 aa14.32□□□□□ -0.12
CSPG4P13-202ENST00000567704 CTAGE8P0CG41 777 aa14.32□□□□□ -0.12
CSPG4P13-202ENST00000567704 FBLN1P23142 703 aa14.32□□□□□ -0.12
CSPG4P13-202ENST00000567704 CCDC57Q2TAC2 916 aa14.32□□□□□ -0.12
CSPG4P13-202ENST00000567704 CTAGE6Q86UF2 777 aa14.32□□□□□ -0.12
CSPG4P13-202ENST00000567704 CTAGE4Q8IX94 777 aa14.32□□□□□ -0.12
CSPG4P13-202ENST00000567704 LRRC2Q9BYS8 371 aa14.32□□□□□ -0.12
CSPG4P13-202ENST00000567704 ORC3Q9UBD5 711 aaPredicted RBP14.32□□□□□ -0.12
CSPG4P13-202ENST00000567704 RPGRIP1LQ68CZ1 1315 aa14.32□□□□□ -0.12
CSPG4P13-202ENST00000567704 IDH1O75874 414 aaKnown RBP14.31□□□□□ -0.12
CSPG4P13-202ENST00000567704 CCDC102BQ68D86 513 aa14.31□□□□□ -0.12
CSPG4P13-202ENST00000567704 ZSCAN25Q6NSZ9 544 aa14.31□□□□□ -0.12
CSPG4P13-202ENST00000567704 RAB11FIP4Q86YS3 637 aa14.31□□□□□ -0.12
CSPG4P13-202ENST00000567704 DMRT2Q9Y5R5 561 aa14.31□□□□□ -0.12
CSPG4P13-202ENST00000567704 C8orf58Q8NAV2 365 aa14.31□□□□□ -0.12
CSPG4P13-202ENST00000567704 INCENPQ9NQS7 918 aa14.31□□□□□ -0.12
CSPG4P13-202ENST00000567704 SAMD9Q5K651 1589 aa14.31□□□□□ -0.12
CSPG4P13-202ENST00000567704 TDO2P48775 406 aa14.31□□□□□ -0.12
CSPG4P13-202ENST00000567704 ELF2Q15723 593 aa14.31□□□□□ -0.12
CSPG4P13-202ENST00000567704 DYDC1Q8WWB3 177 aa14.31□□□□□ -0.12
CSPG4P13-202ENST00000567704 CCDC141Q6ZP82 1450 aa14.31□□□□□ -0.12
CSPG4P13-202ENST00000567704 ASXL1Q8IXJ9 1541 aa14.31□□□□□ -0.12
CSPG4P13-202ENST00000567704 TUBB4AP04350 444 aa14.31□□□□□ -0.12
CSPG4P13-202ENST00000567704 SSBP05455 408 aaKnown RBP eCLIP14.31□□□□□ -0.12
CSPG4P13-202ENST00000567704 GOLGA1Q92805 767 aa14.31□□□□□ -0.12
CSPG4P13-202ENST00000567704 CCDC85AQ96PX6 553 aaPredicted RBP14.31□□□□□ -0.12
CSPG4P13-202ENST00000567704 USP16Q9Y5T5 823 aa14.31□□□□□ -0.12
CSPG4P13-202ENST00000567704 GADD45BO75293 160 aaPredicted RBP14.3□□□□□ -0.12
CSPG4P13-202ENST00000567704 MAP2K1Q02750 393 aaPredicted RBP14.3□□□□□ -0.12
CSPG4P13-202ENST00000567704 SYCP1Q15431 976 aa14.3□□□□□ -0.12
CSPG4P13-202ENST00000567704 ZRSR2Q15696 482 aaKnown RBP14.3□□□□□ -0.12
CSPG4P13-202ENST00000567704 SEPT7Q16181 437 aaKnown RBP14.3□□□□□ -0.12
CSPG4P13-202ENST00000567704 MRPS27Q92552 414 aaKnown RBP14.3□□□□□ -0.12
CSPG4P13-202ENST00000567704 RBM8AQ9Y5S9 174 aaKnown RBP14.3□□□□□ -0.12
CSPG4P13-202ENST00000567704 ADGRL1O94910 1474 aa14.3□□□□□ -0.12
CSPG4P13-202ENST00000567704 HLTFQ14527 1009 aaKnown RBP eCLIP14.3□□□□□ -0.12
CSPG4P13-202ENST00000567704 USO1O60763 962 aaKnown RBP14.3□□□□□ -0.12
CSPG4P13-202ENST00000567704 SYKP43405 635 aa14.3□□□□□ -0.12
CSPG4P13-202ENST00000567704 JADE2Q9NQC1 790 aa14.3□□□□□ -0.12
CSPG4P13-202ENST00000567704 IFNKQ9P0W0 207 aa14.3□□□□□ -0.12
CSPG4P13-202ENST00000567704 CCDC61Q9Y6R9 512 aa14.3□□□□□ -0.12
CSPG4P13-202ENST00000567704 ATP2C2O75185 946 aa14.3□□□□□ -0.12
CSPG4P13-202ENST00000567704 IFFO1Q0D2I5 559 aa14.3□□□□□ -0.12
CSPG4P13-202ENST00000567704 SPECC1Q5M775 1068 aa14.29□□□□□ -0.12
CSPG4P13-202ENST00000567704 SAMD1Q6SPF0 538 aaPredicted RBP14.29□□□□□ -0.12
CSPG4P13-202ENST00000567704 TSPYL6Q8N831 410 aa14.29□□□□□ -0.12
CSPG4P13-202ENST00000567704 NUDT16Q96DE0 195 aaKnown RBP14.29□□□□□ -0.12
CSPG4P13-202ENST00000567704 WAPLQ7Z5K2 1190 aa14.29□□□□□ -0.12
CSPG4P13-202ENST00000567704 OTUD7AQ8TE49 926 aaPredicted RBP14.29□□□□□ -0.12
CSPG4P13-202ENST00000567704 PUF60Q9UHX1 559 aaKnown RBP14.29□□□□□ -0.12
CSPG4P13-202ENST00000567704 IFIT1P09914 478 aaKnown RBP14.29□□□□□ -0.12
CSPG4P13-202ENST00000567704 FANCAO15360 1455 aa14.28□□□□□ -0.12
CSPG4P13-202ENST00000567704 EVCP57679 992 aa14.28□□□□□ -0.12
CSPG4P13-202ENST00000567704 KARSQ15046 597 aaKnown RBP14.28□□□□□ -0.12
CSPG4P13-202ENST00000567704 SEPT11Q9NVA2 429 aaKnown RBP14.28□□□□□ -0.12
CSPG4P13-202ENST00000567704 SLC52A1Q9NWF4 448 aa14.28□□□□□ -0.12
CSPG4P13-202ENST00000567704 ANKRD62A6NC57 917 aa14.28□□□□□ -0.12
CSPG4P13-202ENST00000567704 FKBP15Q5T1M5 1219 aa14.28□□□□□ -0.12
CSPG4P13-202ENST00000567704 POLR3AO14802 1390 aaPredicted RBP14.28□□□□□ -0.12
CSPG4P13-202ENST00000567704 VAMP4O75379 141 aa14.28□□□□□ -0.12
CSPG4P13-202ENST00000567704 CPA1P15085 419 aa14.28□□□□□ -0.12
CSPG4P13-202ENST00000567704 CEP85Q6P2H3 762 aa14.28□□□□□ -0.12
CSPG4P13-202ENST00000567704 MAATS1Q7Z4T9 603 aa14.28□□□□□ -0.12
CSPG4P13-202ENST00000567704 HMG20BQ9P0W2 317 aa14.28□□□□□ -0.12
CSPG4P13-202ENST00000567704 N4BP3O15049 544 aa14.27□□□□□ -0.12
CSPG4P13-202ENST00000567704 CACNA2D4Q7Z3S7 1137 aa14.27□□□□□ -0.12
CSPG4P13-202ENST00000567704 EBAG9O00559 213 aa14.27□□□□□ -0.12
CSPG4P13-202ENST00000567704 NF2P35240 595 aa14.27□□□□□ -0.12
CSPG4P13-202ENST00000567704 TEX14Q8IWB6 1497 aa14.27□□□□□ -0.12
CSPG4P13-202ENST00000567704 CHMLP26374 656 aa14.27□□□□□ -0.13
CSPG4P13-202ENST00000567704 AIDAQ96BJ3 306 aa14.27□□□□□ -0.13
CSPG4P13-202ENST00000567704 ZBTB7BO15156 539 aaPredicted RBP14.27□□□□□ -0.13
CSPG4P13-202ENST00000567704 CCDC175P0C221 793 aa14.27□□□□□ -0.13
CSPG4P13-202ENST00000567704 RHOXF2BP0C7M4 288 aa14.27□□□□□ -0.13
CSPG4P13-202ENST00000567704 HAND2P61296 217 aa14.27□□□□□ -0.13
CSPG4P13-202ENST00000567704 CCDC178Q5BJE1 867 aa14.27□□□□□ -0.13
CSPG4P13-202ENST00000567704 RHOXF2Q9BQY4 288 aa14.27□□□□□ -0.13
CSPG4P13-202ENST00000567704 UTP14AQ9BVJ6 771 aaKnown RBP14.27□□□□□ -0.13
CSPG4P13-202ENST00000567704 GOLGA6L10A0A0M3HER8 536 aa14.26□□□□□ -0.13
CSPG4P13-202ENST00000567704 FAM173BQ6P4H8 233 aa14.26□□□□□ -0.13
CSPG4P13-202ENST00000567704 CEP112Q8N8E3 955 aa14.26□□□□□ -0.13
CSPG4P13-202ENST00000567704 ZNF213O14771 459 aa14.26□□□□□ -0.13
CSPG4P13-202ENST00000567704 DTNBO60941 627 aa14.26□□□□□ -0.13
CSPG4P13-202ENST00000567704 GBP2P32456 591 aaPredicted RBP14.26□□□□□ -0.13
CSPG4P13-202ENST00000567704 TDRD12Q587J7 1177 aaKnown RBP14.26□□□□□ -0.13
CSPG4P13-202ENST00000567704 LZTFL1Q9NQ48 299 aa14.26□□□□□ -0.13
CSPG4P13-202ENST00000567704 NSD2O96028 1365 aa14.26□□□□□ -0.13
CSPG4P13-202ENST00000567704 PLCH2O75038 1416 aa14.26□□□□□ -0.13
CSPG4P13-202ENST00000567704 NBPF11Q86T75 865 aa14.26□□□□□ -0.13
CSPG4P13-202ENST00000567704 CCDC144CPQ8IYA2 1237 aa14.26□□□□□ -0.13
CSPG4P13-202ENST00000567704 ATRIPQ8WXE1 791 aa14.26□□□□□ -0.13
CSPG4P13-202ENST00000567704 MARCKSP29966 332 aaPredicted RBP14.25□□□□□ -0.13
CSPG4P13-202ENST00000567704 KCNG4Q8TDN1 519 aa14.25□□□□□ -0.13
CSPG4P13-202ENST00000567704 DENND4BO75064 1496 aaPredicted RBP14.25□□□□□ -0.13
CSPG4P13-202ENST00000567704 PI4KAP2A4QPH2 592 aa14.25□□□□□ -0.13
CSPG4P13-202ENST00000567704 GOLGA8AA7E2F4 631 aa14.25□□□□□ -0.13
CSPG4P13-202ENST00000567704 ATP8B2P98198 1209 aa14.25□□□□□ -0.13
CSPG4P13-202ENST00000567704 PI4KAP1Q8N8J0 262 aa14.25□□□□□ -0.13
CSPG4P13-202ENST00000567704 BMP2KQ9NSY1 1161 aaPredicted RBP14.25□□□□□ -0.13
CSPG4P13-202ENST00000567704 GOLIM4O00461 696 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms