RNA–Protein interactions for RNA: ENST00000566633.1

PDXDC1-214, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 2,597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-214ENST00000566633 SYNE4Q8N205 404 aa13.22□□□□□ -0.29
PDXDC1-214ENST00000566633 SIL1Q9H173 461 aa13.22□□□□□ -0.29
PDXDC1-214ENST00000566633 UTYO14607 1347 aa13.22□□□□□ -0.29
PDXDC1-214ENST00000566633 DZIP3Q86Y13 1208 aaKnown RBP13.21□□□□□ -0.29
PDXDC1-214ENST00000566633 CCDC85AQ96PX6 553 aaPredicted RBP13.21□□□□□ -0.29
PDXDC1-214ENST00000566633 CWC25Q9NXE8 425 aaPredicted RBP13.21□□□□□ -0.29
PDXDC1-214ENST00000566633 OS9Q13438 667 aaPredicted RBP13.21□□□□□ -0.3
PDXDC1-214ENST00000566633 TCIRG1Q13488 830 aa13.21□□□□□ -0.3
PDXDC1-214ENST00000566633 NUTM1Q86Y26 1132 aa13.21□□□□□ -0.3
PDXDC1-214ENST00000566633 FAM89AQ96GI7 184 aa13.21□□□□□ -0.3
PDXDC1-214ENST00000566633 CHMP3Q9Y3E7 222 aa13.21□□□□□ -0.3
PDXDC1-214ENST00000566633 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.21□□□□□ -0.3
PDXDC1-214ENST00000566633 ATRNO75882 1429 aa13.2□□□□□ -0.3
PDXDC1-214ENST00000566633 FAM177BA6PVY3 158 aa13.2□□□□□ -0.3
PDXDC1-214ENST00000566633 ERC2O15083 957 aa13.2□□□□□ -0.3
PDXDC1-214ENST00000566633 ONECUT3O60422 494 aaPredicted RBP13.2□□□□□ -0.3
PDXDC1-214ENST00000566633 REC8O95072 547 aa13.2□□□□□ -0.3
PDXDC1-214ENST00000566633 MX1P20591 662 aa13.2□□□□□ -0.3
PDXDC1-214ENST00000566633 LINC00116Q8NCU8 138 aa13.2□□□□□ -0.3
PDXDC1-214ENST00000566633 CCDC87Q9NVE4 849 aa13.2□□□□□ -0.3
PDXDC1-214ENST00000566633 MAP3K15Q6ZN16 1313 aa13.2□□□□□ -0.3
PDXDC1-214ENST00000566633 HSP90AA1P07900 732 aaKnown RBP13.2□□□□□ -0.3
PDXDC1-214ENST00000566633 CASP7P55210 303 aa13.2□□□□□ -0.3
PDXDC1-214ENST00000566633 RAB3GAP1Q15042 981 aa13.2□□□□□ -0.3
PDXDC1-214ENST00000566633 RHPN1Q8TCX5 695 aa13.2□□□□□ -0.3
PDXDC1-214ENST00000566633 TNPO1Q92973 898 aaKnown RBP13.2□□□□□ -0.3
PDXDC1-214ENST00000566633 STAP2Q9UGK3 403 aa13.2□□□□□ -0.3
PDXDC1-214ENST00000566633 LAMB4A4D0S4 1761 aa13.19□□□□□ -0.3
PDXDC1-214ENST00000566633 SMARCC1Q92922 1105 aaPredicted RBP13.19□□□□□ -0.3
PDXDC1-214ENST00000566633 H7C1W4 665 aa13.19□□□□□ -0.3
PDXDC1-214ENST00000566633 IL6STP40189 918 aaPredicted RBP13.19□□□□□ -0.3
PDXDC1-214ENST00000566633 EIF5P55010 431 aaKnown RBP13.19□□□□□ -0.3
PDXDC1-214ENST00000566633 MTX1Q13505 466 aa13.19□□□□□ -0.3
PDXDC1-214ENST00000566633 LMBR1LQ6UX01 489 aa13.19□□□□□ -0.3
PDXDC1-214ENST00000566633 GIGYF2Q6Y7W6 1299 aaKnown RBP13.19□□□□□ -0.3
PDXDC1-214ENST00000566633 IL27Q8NEV9 243 aa13.19□□□□□ -0.3
PDXDC1-214ENST00000566633 BRPF3Q9ULD4 1205 aa13.19□□□□□ -0.3
PDXDC1-214ENST00000566633 TRAK2O60296 914 aa13.18□□□□□ -0.3
PDXDC1-214ENST00000566633 CCDC191Q8NCU4 936 aa13.18□□□□□ -0.3
PDXDC1-214ENST00000566633 ISCA1Q9BUE6 129 aa13.18□□□□□ -0.3
PDXDC1-214ENST00000566633 FOXD4L1Q9NU39 408 aa13.18□□□□□ -0.3
PDXDC1-214ENST00000566633 DDX11L8A8MPP1 907 aa13.18□□□□□ -0.3
PDXDC1-214ENST00000566633 RAB11FIP3O75154 756 aa13.17□□□□□ -0.3
PDXDC1-214ENST00000566633 FOXO4P98177 505 aa13.17□□□□□ -0.3
PDXDC1-214ENST00000566633 HDAC5Q9UQL6 1122 aa13.17□□□□□ -0.3
PDXDC1-214ENST00000566633 CCNL1Q9UK58 526 aaPredicted RBP13.16□□□□□ -0.3
PDXDC1-214ENST00000566633 TUBGCP6Q96RT7 1819 aa13.16□□□□□ -0.3
PDXDC1-214ENST00000566633 ARFGEF2Q9Y6D5 1785 aa13.16□□□□□ -0.3
PDXDC1-214ENST00000566633 TRIM37O94972 964 aa13.16□□□□□ -0.3
PDXDC1-214ENST00000566633 KRT27Q7Z3Y8 459 aa13.16□□□□□ -0.3
PDXDC1-214ENST00000566633 NLRP10Q86W26 655 aa13.16□□□□□ -0.3
PDXDC1-214ENST00000566633 AMIGO3Q86WK7 504 aa13.16□□□□□ -0.3
PDXDC1-214ENST00000566633 KIF1BPQ96EK5 621 aa13.16□□□□□ -0.3
PDXDC1-214ENST00000566633 ZNF594Q96JF6 807 aaPredicted RBP13.16□□□□□ -0.3
PDXDC1-214ENST00000566633 AOX1Q06278 1338 aa13.16□□□□□ -0.3
PDXDC1-214ENST00000566633 SASH1O94885 1247 aa13.15□□□□□ -0.3
PDXDC1-214ENST00000566633 MAP4K4O95819 1239 aaPredicted RBP13.15□□□□□ -0.3
PDXDC1-214ENST00000566633 GBP4Q96PP9 640 aa13.15□□□□□ -0.3
PDXDC1-214ENST00000566633 ESYT1Q9BSJ8 1104 aa13.15□□□□□ -0.3
PDXDC1-214ENST00000566633 CHMLP26374 656 aa13.15□□□□□ -0.3
PDXDC1-214ENST00000566633 PTPN12Q05209 780 aaKnown RBP13.15□□□□□ -0.3
PDXDC1-214ENST00000566633 G3BP1Q13283 466 aaKnown RBP eCLIP13.15□□□□□ -0.32e-7■■□□□ 13
PDXDC1-214ENST00000566633 TRMT112Q9UI30 125 aaKnown RBP13.15□□□□□ -0.3
PDXDC1-214ENST00000566633 UBN2Q6ZU65 1347 aa13.15□□□□□ -0.31
PDXDC1-214ENST00000566633 THSD7AQ9UPZ6 1657 aa13.14□□□□□ -0.31
PDXDC1-214ENST00000566633 ST18O60284 1047 aa13.14□□□□□ -0.31
PDXDC1-214ENST00000566633 RFX5P48382 616 aaPredicted RBP13.14□□□□□ -0.31
PDXDC1-214ENST00000566633 RABL6Q3YEC7 729 aaPredicted RBP13.14□□□□□ -0.31
PDXDC1-214ENST00000566633 FBXO41Q8TF61 875 aa13.14□□□□□ -0.31
PDXDC1-214ENST00000566633 TRIM6-TRIM34B2RNG4 842 aa13.14□□□□□ -0.31
PDXDC1-214ENST00000566633 RILPL2Q969X0 211 aa13.14□□□□□ -0.31
PDXDC1-214ENST00000566633 CCDC8Q9H0W5 538 aaPredicted RBP13.14□□□□□ -0.31
PDXDC1-214ENST00000566633 CAMTA2O94983 1202 aa13.13□□□□□ -0.31
PDXDC1-214ENST00000566633 TJP1Q07157 1748 aa13.13□□□□□ -0.31
PDXDC1-214ENST00000566633 BICDL1Q6ZP65 573 aa13.13□□□□□ -0.31
PDXDC1-214ENST00000566633 CLEC17AQ6ZS10 378 aa13.13□□□□□ -0.31
PDXDC1-214ENST00000566633 ZBTB38Q8NAP3 1195 aaPredicted RBP13.13□□□□□ -0.31
PDXDC1-214ENST00000566633 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.13□□□□□ -0.31
PDXDC1-214ENST00000566633 GZF1Q9H116 711 aaPredicted RBP13.13□□□□□ -0.31
PDXDC1-214ENST00000566633 LRRC4BQ9NT99 713 aa13.13□□□□□ -0.31
PDXDC1-214ENST00000566633 GNPATO15228 680 aa13.13□□□□□ -0.31
PDXDC1-214ENST00000566633 PHF14O94880 888 aa13.13□□□□□ -0.31
PDXDC1-214ENST00000566633 TRIM28Q13263 835 aaKnown RBP13.13□□□□□ -0.31
PDXDC1-214ENST00000566633 L1TD1Q5T7N2 865 aaKnown RBP13.13□□□□□ -0.31
PDXDC1-214ENST00000566633 SUSD4Q5VX71 490 aa13.13□□□□□ -0.31
PDXDC1-214ENST00000566633 FSD2A1L4K1 749 aa13.12□□□□□ -0.31
PDXDC1-214ENST00000566633 ERVV-1B6SEH8 477 aa13.12□□□□□ -0.31
PDXDC1-214ENST00000566633 SSFA2P28290 1259 aa13.12□□□□□ -0.31
PDXDC1-214ENST00000566633 HSP90AB4PQ58FF6 505 aa13.12□□□□□ -0.31
PDXDC1-214ENST00000566633 CLASRPQ8N2M8 674 aaKnown RBP13.12□□□□□ -0.31
PDXDC1-214ENST00000566633 EAF2Q96CJ1 260 aaPredicted RBP13.12□□□□□ -0.31
PDXDC1-214ENST00000566633 TLR7Q9NYK1 1049 aaKnown RBP13.12□□□□□ -0.31
PDXDC1-214ENST00000566633 PCCAP05165 728 aaPredicted RBP13.12□□□□□ -0.31
PDXDC1-214ENST00000566633 ZNF772Q68DY9 489 aaPredicted RBP13.12□□□□□ -0.31
PDXDC1-214ENST00000566633 AACSQ86V21 672 aa13.12□□□□□ -0.31
PDXDC1-214ENST00000566633 SRP68Q9UHB9 627 aaKnown RBP13.12□□□□□ -0.31
PDXDC1-214ENST00000566633 NIP7Q9Y221 180 aaKnown RBP eCLIP13.12□□□□□ -0.31
PDXDC1-214ENST00000566633 COL15A1P39059 1388 aa13.11□□□□□ -0.31
PDXDC1-214ENST00000566633 MYH14Q7Z406 1995 aaKnown RBP13.11□□□□□ -0.31
PDXDC1-214ENST00000566633 HCLS1P14317 486 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms