RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 SMIM5Q71RC9 77 aa13.98□□□□□ -0.17
SNX29-204ENST00000564791 NLRP10Q86W26 655 aa13.98□□□□□ -0.17
SNX29-204ENST00000564791 SMARCA5O60264 1052 aaPredicted RBP13.97□□□□□ -0.17
SNX29-204ENST00000564791 ZNF34Q8IZ26 560 aa13.97□□□□□ -0.17
SNX29-204ENST00000564791 TSHZ2Q9NRE2 1034 aa13.97□□□□□ -0.17
SNX29-204ENST00000564791 MYH3P11055 1940 aa13.97□□□□□ -0.17
SNX29-204ENST00000564791 UBN2Q6ZU65 1347 aa13.97□□□□□ -0.17
SNX29-204ENST00000564791 PCCAP05165 728 aaPredicted RBP13.97□□□□□ -0.17
SNX29-204ENST00000564791 SLC27A3Q5K4L6 730 aa13.97□□□□□ -0.17
SNX29-204ENST00000564791 SURF6O75683 361 aaKnown RBP13.96□□□□□ -0.17
SNX29-204ENST00000564791 FOXO4P98177 505 aa13.96□□□□□ -0.17
SNX29-204ENST00000564791 RABL6Q3YEC7 729 aaPredicted RBP13.96□□□□□ -0.17
SNX29-204ENST00000564791 AMIGO3Q86WK7 504 aa13.96□□□□□ -0.17
SNX29-204ENST00000564791 ZBTB47Q9UFB7 747 aaPredicted RBP13.96□□□□□ -0.17
SNX29-204ENST00000564791 RGPD3A6NKT7 1758 aaPredicted RBP13.95□□□□□ -0.18
SNX29-204ENST00000564791 RGPD4Q7Z3J3 1758 aa13.95□□□□□ -0.18
SNX29-204ENST00000564791 ZBTB38Q8NAP3 1195 aaPredicted RBP13.95□□□□□ -0.18
SNX29-204ENST00000564791 FAM89AQ96GI7 184 aa13.95□□□□□ -0.18
SNX29-204ENST00000564791 AK7Q96M32 723 aa13.95□□□□□ -0.18
SNX29-204ENST00000564791 PA2G4Q9UQ80 394 aaKnown RBP13.95□□□□□ -0.18
SNX29-204ENST00000564791 RTCBQ9Y3I0 505 aaKnown RBP13.95□□□□□ -0.18
SNX29-204ENST00000564791 LAMB2P55268 1798 aa13.94□□□□□ -0.18
SNX29-204ENST00000564791 APBA3O96018 575 aa13.94□□□□□ -0.18
SNX29-204ENST00000564791 TXNRD1Q16881 649 aa13.94□□□□□ -0.18
SNX29-204ENST00000564791 LMBR1LQ6UX01 489 aa13.94□□□□□ -0.18
SNX29-204ENST00000564791 LRRCC1Q9C099 1032 aa13.94□□□□□ -0.18
SNX29-204ENST00000564791 BCL11AQ9H165 835 aa13.94□□□□□ -0.18
SNX29-204ENST00000564791 SRP68Q9UHB9 627 aaKnown RBP13.94□□□□□ -0.18
SNX29-204ENST00000564791 ZNF652Q9Y2D9 606 aa13.94□□□□□ -0.18
SNX29-204ENST00000564791 NOP58Q9Y2X3 529 aaKnown RBP13.94□□□□□ -0.18
SNX29-204ENST00000564791 CDHR2Q9BYE9 1310 aa13.94□□□□□ -0.18
SNX29-204ENST00000564791 RAB11FIP3O75154 756 aa13.93□□□□□ -0.18
SNX29-204ENST00000564791 C16orf71Q8IYS4 520 aaPredicted RBP13.93□□□□□ -0.18
SNX29-204ENST00000564791 PROM2Q8N271 834 aa13.93□□□□□ -0.18
SNX29-204ENST00000564791 NARFQ9UHQ1 456 aa13.93□□□□□ -0.18
SNX29-204ENST00000564791 TRMT112Q9UI30 125 aaKnown RBP13.93□□□□□ -0.18
SNX29-204ENST00000564791 COL24A1Q17RW2 1714 aa13.93□□□□□ -0.18
SNX29-204ENST00000564791 DDX60Q8IY21 1712 aaKnown RBP13.93□□□□□ -0.18
SNX29-204ENST00000564791 PLSCR1O15162 318 aa13.93□□□□□ -0.18
SNX29-204ENST00000564791 PHF14O94880 888 aa13.93□□□□□ -0.18
SNX29-204ENST00000564791 RFX5P48382 616 aaPredicted RBP13.93□□□□□ -0.18
SNX29-204ENST00000564791 PARP10Q53GL7 1025 aa13.93□□□□□ -0.18
SNX29-204ENST00000564791 HSP90AB4PQ58FF6 505 aa13.93□□□□□ -0.18
SNX29-204ENST00000564791 SUSD4Q5VX71 490 aa13.93□□□□□ -0.18
SNX29-204ENST00000564791 USPL1Q5W0Q7 1092 aa13.93□□□□□ -0.18
SNX29-204ENST00000564791 CLEC4GQ6UXB4 293 aa13.93□□□□□ -0.18
SNX29-204ENST00000564791 SYNE4Q8N205 404 aa13.93□□□□□ -0.18
SNX29-204ENST00000564791 OTUD7AQ8TE49 926 aaPredicted RBP13.93□□□□□ -0.18
SNX29-204ENST00000564791 ARHGEF1Q92888 912 aaKnown RBP13.93□□□□□ -0.18
SNX29-204ENST00000564791 PLA2G12BQ9BX93 195 aa13.93□□□□□ -0.18
SNX29-204ENST00000564791 BCL2L12Q9HB09 334 aa13.93□□□□□ -0.18
SNX29-204ENST00000564791 NIP7Q9Y221 180 aaKnown RBP eCLIP13.93□□□□□ -0.18
SNX29-204ENST00000564791 TUBGCP6Q96RT7 1819 aa13.92□□□□□ -0.18
SNX29-204ENST00000564791 RGL2O15211 777 aa13.92□□□□□ -0.18
SNX29-204ENST00000564791 OS9Q13438 667 aaPredicted RBP13.92□□□□□ -0.18
SNX29-204ENST00000564791 KLHDC4Q8TBB5 520 aa13.92□□□□□ -0.18
SNX29-204ENST00000564791 RHPN1Q8TCX5 695 aa13.92□□□□□ -0.18
SNX29-204ENST00000564791 CHMP3Q9Y3E7 222 aa13.92□□□□□ -0.18
SNX29-204ENST00000564791 FAM177BA6PVY3 158 aa13.91□□□□□ -0.18
SNX29-204ENST00000564791 ZPR1O75312 459 aa13.91□□□□□ -0.18
SNX29-204ENST00000564791 PLEKHM2Q8IWE5 1019 aa13.91□□□□□ -0.18
SNX29-204ENST00000564791 UTP14AQ9BVJ6 771 aaKnown RBP13.91□□□□□ -0.18
SNX29-204ENST00000564791 CASZ1Q86V15 1759 aa13.91□□□□□ -0.18
SNX29-204ENST00000564791 IRS4O14654 1257 aaPredicted RBP13.9□□□□□ -0.18
SNX29-204ENST00000564791 NTSR2O95665 410 aa13.9□□□□□ -0.18
SNX29-204ENST00000564791 PTPN12Q05209 780 aaKnown RBP13.9□□□□□ -0.18
SNX29-204ENST00000564791 TRAPPC3LQ5T215 181 aa13.9□□□□□ -0.18
SNX29-204ENST00000564791 KIF1BPQ96EK5 621 aa13.9□□□□□ -0.18
SNX29-204ENST00000564791 SIL1Q9H173 461 aa13.9□□□□□ -0.18
SNX29-204ENST00000564791 IL1RAPL2Q9NP60 686 aa13.9□□□□□ -0.18
SNX29-204ENST00000564791 COPRSQ9NQ92 184 aa13.9□□□□□ -0.18
SNX29-204ENST00000564791 SH3TC1Q8TE82 1336 aa13.9□□□□□ -0.18
SNX29-204ENST00000564791 USP42Q9H9J4 1324 aaKnown RBP13.9□□□□□ -0.18
SNX29-204ENST00000564791 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.9□□□□□ -0.19
SNX29-204ENST00000564791 ADRA2BP18089 450 aa13.9□□□□□ -0.19
SNX29-204ENST00000564791 G3BP1Q13283 466 aaKnown RBP eCLIP13.9□□□□□ -0.19
SNX29-204ENST00000564791 FAM161AQ3B820 660 aa13.9□□□□□ -0.19
SNX29-204ENST00000564791 TBC1D9BQ66K14 1250 aa13.9□□□□□ -0.19
SNX29-204ENST00000564791 ERC1Q8IUD2 1116 aa13.9□□□□□ -0.19
SNX29-204ENST00000564791 BACH2Q9BYV9 841 aa13.9□□□□□ -0.19
SNX29-204ENST00000564791 CSF1RP07333 972 aa13.89□□□□□ -0.19
SNX29-204ENST00000564791 RFC4P35249 363 aa13.89□□□□□ -0.19
SNX29-204ENST00000564791 C8orf34Q49A92 452 aa13.89□□□□□ -0.19
SNX29-204ENST00000564791 SALL3Q9BXA9 1300 aa13.88□□□□□ -0.19
SNX29-204ENST00000564791 PDE8AO60658 829 aa13.88□□□□□ -0.19
SNX29-204ENST00000564791 SSFA2P28290 1259 aa13.88□□□□□ -0.19
SNX29-204ENST00000564791 CTSWP56202 376 aa13.88□□□□□ -0.19
SNX29-204ENST00000564791 BICDL1Q6ZP65 573 aa13.88□□□□□ -0.19
SNX29-204ENST00000564791 CCDC85AQ96PX6 553 aaPredicted RBP13.88□□□□□ -0.19
SNX29-204ENST00000564791 SASH1O94885 1247 aa13.87□□□□□ -0.19
SNX29-204ENST00000564791 HCLS1P14317 486 aaPredicted RBP13.87□□□□□ -0.19
SNX29-204ENST00000564791 HMGB2P26583 209 aaKnown RBP13.87□□□□□ -0.19
SNX29-204ENST00000564791 ZNF827Q17R98 1081 aa13.87□□□□□ -0.19
SNX29-204ENST00000564791 NUTM1Q86Y26 1132 aa13.87□□□□□ -0.19
SNX29-204ENST00000564791 PDE1AP54750 535 aa13.86□□□□□ -0.19
SNX29-204ENST00000564791 CCDC57Q2TAC2 916 aa13.86□□□□□ -0.19
SNX29-204ENST00000564791 BMP2KLQ5H9B9 411 aa13.86□□□□□ -0.19
SNX29-204ENST00000564791 TTLL11Q8NHH1 800 aa13.86□□□□□ -0.19
SNX29-204ENST00000564791 AKT1S1Q96B36 256 aa13.86□□□□□ -0.19
SNX29-204ENST00000564791 ZNF594Q96JF6 807 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms