RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 USP42Q9H9J4 1324 aaKnown RBP11.74□□□□□ -0.53
CDH13-205ENST00000562307 EIF5BO60841 1220 aaKnown RBP11.73□□□□□ -0.53
CDH13-205ENST00000562307 CDC45O75419 566 aa11.73□□□□□ -0.53
CDH13-205ENST00000562307 SASH1O94885 1247 aa11.73□□□□□ -0.53
CDH13-205ENST00000562307 SDSP20132 328 aa11.73□□□□□ -0.53
CDH13-205ENST00000562307 PTPN12Q05209 780 aaKnown RBP11.73□□□□□ -0.53
CDH13-205ENST00000562307 G3BP1Q13283 466 aaKnown RBP eCLIP11.73□□□□□ -0.53
CDH13-205ENST00000562307 LMBR1LQ6UX01 489 aa11.73□□□□□ -0.53
CDH13-205ENST00000562307 NPM2Q86SE8 214 aaKnown RBP11.73□□□□□ -0.53
CDH13-205ENST00000562307 ZBTB38Q8NAP3 1195 aaPredicted RBP11.73□□□□□ -0.53
CDH13-205ENST00000562307 LINC00116Q8NCU8 138 aa11.73□□□□□ -0.53
CDH13-205ENST00000562307 CDHR2Q9BYE9 1310 aa11.73□□□□□ -0.53
CDH13-205ENST00000562307 CNTNAP4Q9C0A0 1308 aa11.73□□□□□ -0.53
CDH13-205ENST00000562307 IL1RAPL2Q9NP60 686 aa11.73□□□□□ -0.53
CDH13-205ENST00000562307 ZNF330Q9Y3S2 320 aaPredicted RBP11.73□□□□□ -0.53
CDH13-205ENST00000562307 CAMTA2O94983 1202 aa11.72□□□□□ -0.53
CDH13-205ENST00000562307 CSF1RP07333 972 aa11.72□□□□□ -0.53
CDH13-205ENST00000562307 TBC1D9Q6ZT07 1266 aa11.72□□□□□ -0.53
CDH13-205ENST00000562307 CLASRPQ8N2M8 674 aaKnown RBP11.72□□□□□ -0.53
CDH13-205ENST00000562307 TBC1D32Q96NH3 1257 aa11.72□□□□□ -0.53
CDH13-205ENST00000562307 IPO9Q96P70 1041 aaKnown RBP11.72□□□□□ -0.53
CDH13-205ENST00000562307 BCL11BQ9C0K0 894 aaPredicted RBP11.72□□□□□ -0.53
CDH13-205ENST00000562307 UPF2Q9HAU5 1272 aaKnown RBP11.72□□□□□ -0.53
CDH13-205ENST00000562307 TBC1D2BQ9UPU7 963 aa11.72□□□□□ -0.53
CDH13-205ENST00000562307 COL5A3P25940 1745 aaPredicted RBP11.72□□□□□ -0.53
CDH13-205ENST00000562307 KAT6BQ8WYB5 2073 aa11.71□□□□□ -0.53
CDH13-205ENST00000562307 TTC41PQ6P2S7 1318 aa11.71□□□□□ -0.53
CDH13-205ENST00000562307 OS9Q13438 667 aaPredicted RBP11.71□□□□□ -0.53
CDH13-205ENST00000562307 ZNF772Q68DY9 489 aaPredicted RBP11.71□□□□□ -0.53
CDH13-205ENST00000562307 RPS6KA4O75676 772 aa11.7□□□□□ -0.54
CDH13-205ENST00000562307 FAM182BQ5T319 152 aa11.7□□□□□ -0.54
CDH13-205ENST00000562307 CLEC4GQ6UXB4 293 aa11.7□□□□□ -0.54
CDH13-205ENST00000562307 FAM196AQ6ZSG2 479 aa11.7□□□□□ -0.54
CDH13-205ENST00000562307 ILDR2Q71H61 639 aa11.7□□□□□ -0.54
CDH13-205ENST00000562307 NUTM1Q86Y26 1132 aa11.7□□□□□ -0.54
CDH13-205ENST00000562307 PI4K2BQ8TCG2 481 aa11.7□□□□□ -0.54
CDH13-205ENST00000562307 DDRGK1Q96HY6 314 aa11.7□□□□□ -0.54
CDH13-205ENST00000562307 AK7Q96M32 723 aa11.7□□□□□ -0.54
CDH13-205ENST00000562307 ARXQ96QS3 562 aa11.7□□□□□ -0.54
CDH13-205ENST00000562307 FBXO3Q9UK99 471 aa11.7□□□□□ -0.54
CDH13-205ENST00000562307 BTAF1O14981 1849 aa11.7□□□□□ -0.54
CDH13-205ENST00000562307 UBN2Q6ZU65 1347 aa11.69□□□□□ -0.54
CDH13-205ENST00000562307 MYH14Q7Z406 1995 aaKnown RBP11.69□□□□□ -0.54
CDH13-205ENST00000562307 CIAO1O76071 339 aa11.69□□□□□ -0.54
CDH13-205ENST00000562307 GPTP24298 496 aa11.69□□□□□ -0.54
CDH13-205ENST00000562307 RBM6P78332 1123 aaKnown RBP11.69□□□□□ -0.54
CDH13-205ENST00000562307 PARP10Q53GL7 1025 aa11.69□□□□□ -0.54
CDH13-205ENST00000562307 KRT27Q7Z3Y8 459 aa11.69□□□□□ -0.54
CDH13-205ENST00000562307 KLHDC4Q8TBB5 520 aa11.69□□□□□ -0.54
CDH13-205ENST00000562307 FAM89AQ96GI7 184 aa11.69□□□□□ -0.54
CDH13-205ENST00000562307 GPR108Q9NPR9 543 aa11.69□□□□□ -0.54
CDH13-205ENST00000562307 ANKRD36CQ5JPF3 1778 aa11.69□□□□□ -0.54
CDH13-205ENST00000562307 NUP98P52948 1817 aa11.68□□□□□ -0.54
CDH13-205ENST00000562307 SBF2Q86WG5 1849 aa11.68□□□□□ -0.54
CDH13-205ENST00000562307 IFIT2P09913 472 aaKnown RBP11.68□□□□□ -0.54
CDH13-205ENST00000562307 RBM25P49756 843 aaKnown RBP11.68□□□□□ -0.54
CDH13-205ENST00000562307 RTL5Q5HYW3 569 aaPredicted RBP11.68□□□□□ -0.54
CDH13-205ENST00000562307 ATG9AQ7Z3C6 839 aa11.68□□□□□ -0.54
CDH13-205ENST00000562307 EAF2Q96CJ1 260 aaPredicted RBP11.68□□□□□ -0.54
CDH13-205ENST00000562307 ECHDC1Q9NTX5 307 aa11.68□□□□□ -0.54
CDH13-205ENST00000562307 TRMT112Q9UI30 125 aaKnown RBP11.68□□□□□ -0.54
CDH13-205ENST00000562307 CCNL1Q9UK58 526 aaPredicted RBP11.68□□□□□ -0.54
CDH13-205ENST00000562307 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.68□□□□□ -0.54
CDH13-205ENST00000562307 LY75O60449 1722 aa11.67□□□□□ -0.54
CDH13-205ENST00000562307 ERC2O15083 957 aa11.67□□□□□ -0.54
CDH13-205ENST00000562307 MSH5O43196 834 aa11.67□□□□□ -0.54
CDH13-205ENST00000562307 PDE8AO60658 829 aa11.67□□□□□ -0.54
CDH13-205ENST00000562307 GLRX3O76003 335 aaKnown RBP11.67□□□□□ -0.54
CDH13-205ENST00000562307 IL15P40933 162 aaPredicted RBP11.67□□□□□ -0.54
CDH13-205ENST00000562307 MFAP1P55081 439 aaKnown RBP11.67□□□□□ -0.54
CDH13-205ENST00000562307 SUSD4Q5VX71 490 aa11.67□□□□□ -0.54
CDH13-205ENST00000562307 TSHZ3Q63HK5 1081 aa11.67□□□□□ -0.54
CDH13-205ENST00000562307 CASC1Q6TDU7 716 aa11.67□□□□□ -0.54
CDH13-205ENST00000562307 AACSQ86V21 672 aa11.67□□□□□ -0.54
CDH13-205ENST00000562307 TTLL11Q8NHH1 800 aa11.67□□□□□ -0.54
CDH13-205ENST00000562307 GPATCH3Q96I76 525 aa11.67□□□□□ -0.54
CDH13-205ENST00000562307 C22orf23Q9BZE7 217 aa11.67□□□□□ -0.54
CDH13-205ENST00000562307 BCL11AQ9H165 835 aa11.67□□□□□ -0.54
CDH13-205ENST00000562307 SIL1Q9H173 461 aa11.67□□□□□ -0.54
CDH13-205ENST00000562307 ZNF652Q9Y2D9 606 aa11.67□□□□□ -0.54
CDH13-205ENST00000562307 EYA2O00167 538 aa11.66□□□□□ -0.54
CDH13-205ENST00000562307 IRS4O14654 1257 aaPredicted RBP11.66□□□□□ -0.54
CDH13-205ENST00000562307 KCNQ4P56696 695 aa11.66□□□□□ -0.54
CDH13-205ENST00000562307 TFCP2Q12800 502 aa11.66□□□□□ -0.54
CDH13-205ENST00000562307 SYNE4Q8N205 404 aa11.66□□□□□ -0.54
CDH13-205ENST00000562307 UTP14AQ9BVJ6 771 aaKnown RBP11.66□□□□□ -0.54
CDH13-205ENST00000562307 NARFQ9UHQ1 456 aa11.66□□□□□ -0.54
CDH13-205ENST00000562307 TUBGCP6Q96RT7 1819 aa11.65□□□□□ -0.54
CDH13-205ENST00000562307 SH3TC1Q8TE82 1336 aa11.65□□□□□ -0.54
CDH13-205ENST00000562307 NTSR2O95665 410 aa11.65□□□□□ -0.54
CDH13-205ENST00000562307 HSP90B1P14625 803 aaKnown RBP11.65□□□□□ -0.54
CDH13-205ENST00000562307 CTSWP56202 376 aa11.65□□□□□ -0.54
CDH13-205ENST00000562307 CCDC57Q2TAC2 916 aa11.65□□□□□ -0.54
CDH13-205ENST00000562307 TNNI3KQ59H18 835 aa11.65□□□□□ -0.54
CDH13-205ENST00000562307 CHMP3Q9Y3E7 222 aa11.65□□□□□ -0.54
CDH13-205ENST00000562307 FPGT-TNNI3KV9GXZ4 949 aa11.65□□□□□ -0.54
CDH13-205ENST00000562307 CHMLP26374 656 aa11.64□□□□□ -0.55
CDH13-205ENST00000562307 HMGB2P26583 209 aaKnown RBP11.64□□□□□ -0.55
CDH13-205ENST00000562307 IFIT5Q13325 482 aaKnown RBP11.64□□□□□ -0.55
CDH13-205ENST00000562307 SLC27A3Q5K4L6 730 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms