RNA–Protein interactions for RNA: ENST00000561410.5

AP3S2-215, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 4

Gene AP3S2, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-215ENST00000561410 CHMP3Q9Y3E7 222 aa16.99■□□□□ 0.31
AP3S2-215ENST00000561410 RXRBP28702 533 aa16.98■□□□□ 0.31
AP3S2-215ENST00000561410 ANP32AP39687 249 aaKnown RBP16.98■□□□□ 0.31
AP3S2-215ENST00000561410 TTC22Q5TAA0 569 aa16.98■□□□□ 0.31
AP3S2-215ENST00000561410 LMBR1LQ6UX01 489 aa16.98■□□□□ 0.31
AP3S2-215ENST00000561410 NLRP10Q86W26 655 aa16.98■□□□□ 0.31
AP3S2-215ENST00000561410 UPF2Q9HAU5 1272 aaKnown RBP16.98■□□□□ 0.31
AP3S2-215ENST00000561410 FOXO4P98177 505 aa16.97■□□□□ 0.31
AP3S2-215ENST00000561410 IL1RAPL2Q9NP60 686 aa16.97■□□□□ 0.31
AP3S2-215ENST00000561410 PA2G4Q9UQ80 394 aaKnown RBP16.97■□□□□ 0.31
AP3S2-215ENST00000561410 BTAF1O14981 1849 aa16.97■□□□□ 0.31
AP3S2-215ENST00000561410 RREB1Q92766 1687 aa16.97■□□□□ 0.31
AP3S2-215ENST00000561410 CAMTA2O94983 1202 aa16.96■□□□□ 0.31
AP3S2-215ENST00000561410 MX1P20591 662 aa16.96■□□□□ 0.31
AP3S2-215ENST00000561410 HMGB2P26583 209 aaKnown RBP16.96■□□□□ 0.31
AP3S2-215ENST00000561410 KCNQ4P56696 695 aa16.96■□□□□ 0.31
AP3S2-215ENST00000561410 CLASRPQ8N2M8 674 aaKnown RBP16.96■□□□□ 0.31
AP3S2-215ENST00000561410 OTUD7AQ8TE49 926 aaPredicted RBP16.96■□□□□ 0.31
AP3S2-215ENST00000561410 TRMT112Q9UI30 125 aaKnown RBP16.96■□□□□ 0.31
AP3S2-215ENST00000561410 EIF5BO60841 1220 aaKnown RBP16.95■□□□□ 0.3
AP3S2-215ENST00000561410 PDE1AP54750 535 aa16.95■□□□□ 0.3
AP3S2-215ENST00000561410 PARP10Q53GL7 1025 aa16.95■□□□□ 0.3
AP3S2-215ENST00000561410 ZNF34Q8IZ26 560 aa16.95■□□□□ 0.3
AP3S2-215ENST00000561410 FAM89AQ96GI7 184 aa16.95■□□□□ 0.3
AP3S2-215ENST00000561410 GPATCH3Q96I76 525 aa16.95■□□□□ 0.3
AP3S2-215ENST00000561410 SIL1Q9H173 461 aa16.95■□□□□ 0.3
AP3S2-215ENST00000561410 COPRSQ9NQ92 184 aa16.95■□□□□ 0.3
AP3S2-215ENST00000561410 CDHR2Q9BYE9 1310 aa16.95■□□□□ 0.3
AP3S2-215ENST00000561410 GNPATO15228 680 aa16.94■□□□□ 0.3
AP3S2-215ENST00000561410 RPS6KA4O75676 772 aa16.94■□□□□ 0.3
AP3S2-215ENST00000561410 TRIM37O94972 964 aa16.94■□□□□ 0.3
AP3S2-215ENST00000561410 HSP90B1P14625 803 aaKnown RBP16.94■□□□□ 0.3
AP3S2-215ENST00000561410 OSBPL3Q9H4L5 887 aa16.94■□□□□ 0.3
AP3S2-215ENST00000561410 RTCBQ9Y3I0 505 aaKnown RBP16.94■□□□□ 0.3
AP3S2-215ENST00000561410 AOX1Q06278 1338 aa16.94■□□□□ 0.3
AP3S2-215ENST00000561410 COL5A3P25940 1745 aaPredicted RBP16.93■□□□□ 0.3
AP3S2-215ENST00000561410 RGL2O15211 777 aa16.93■□□□□ 0.3
AP3S2-215ENST00000561410 CDC45O75419 566 aa16.93■□□□□ 0.3
AP3S2-215ENST00000561410 IFIT2P09913 472 aaKnown RBP16.93■□□□□ 0.3
AP3S2-215ENST00000561410 CASC1Q6TDU7 716 aa16.93■□□□□ 0.3
AP3S2-215ENST00000561410 NUTM1Q86Y26 1132 aa16.93■□□□□ 0.3
AP3S2-215ENST00000561410 AK7Q96M32 723 aa16.93■□□□□ 0.3
AP3S2-215ENST00000561410 UTP14AQ9BVJ6 771 aaKnown RBP16.93■□□□□ 0.3
AP3S2-215ENST00000561410 PLA2G12BQ9BX93 195 aa16.93■□□□□ 0.3
AP3S2-215ENST00000561410 STAP2Q9UGK3 403 aa16.93■□□□□ 0.3
AP3S2-215ENST00000561410 ZPR1O75312 459 aa16.92■□□□□ 0.3
AP3S2-215ENST00000561410 RFX5P48382 616 aaPredicted RBP16.92■□□□□ 0.3
AP3S2-215ENST00000561410 CCDC57Q2TAC2 916 aa16.92■□□□□ 0.3
AP3S2-215ENST00000561410 TAF7LQ5H9L4 462 aa16.92■□□□□ 0.3
AP3S2-215ENST00000561410 SLC27A3Q5K4L6 730 aa16.92■□□□□ 0.3
AP3S2-215ENST00000561410 CLEC4GQ6UXB4 293 aa16.92■□□□□ 0.3
AP3S2-215ENST00000561410 NIP7Q9Y221 180 aaKnown RBP eCLIP16.92■□□□□ 0.3
AP3S2-215ENST00000561410 IRS4O14654 1257 aaPredicted RBP16.91■□□□□ 0.3
AP3S2-215ENST00000561410 GSPT1P15170 499 aaKnown RBP16.91■□□□□ 0.3
AP3S2-215ENST00000561410 PTPN12Q05209 780 aaKnown RBP16.91■□□□□ 0.3
AP3S2-215ENST00000561410 AACSQ86V21 672 aa16.91■□□□□ 0.3
AP3S2-215ENST00000561410 KLHDC4Q8TBB5 520 aa16.91■□□□□ 0.3
AP3S2-215ENST00000561410 SH3TC1Q8TE82 1336 aa16.91■□□□□ 0.3
AP3S2-215ENST00000561410 IFIT5Q13325 482 aaKnown RBP16.9■□□□□ 0.3
AP3S2-215ENST00000561410 UBN2Q6ZU65 1347 aa16.9■□□□□ 0.3
AP3S2-215ENST00000561410 SALL3Q9BXA9 1300 aa16.9■□□□□ 0.3
AP3S2-215ENST00000561410 SBF2Q86WG5 1849 aa16.89■□□□□ 0.29
AP3S2-215ENST00000561410 FAM177BA6PVY3 158 aa16.89■□□□□ 0.29
AP3S2-215ENST00000561410 ERC2O15083 957 aa16.89■□□□□ 0.29
AP3S2-215ENST00000561410 PDE8AO60658 829 aa16.89■□□□□ 0.29
AP3S2-215ENST00000561410 SASH1O94885 1247 aa16.89■□□□□ 0.29
AP3S2-215ENST00000561410 CTSWP56202 376 aa16.89■□□□□ 0.29
AP3S2-215ENST00000561410 SUSD4Q5VX71 490 aa16.89■□□□□ 0.29
AP3S2-215ENST00000561410 NARFQ9UHQ1 456 aa16.89■□□□□ 0.29
AP3S2-215ENST00000561410 TTC41PQ6P2S7 1318 aa16.89■□□□□ 0.29
AP3S2-215ENST00000561410 ANKRD36CQ5JPF3 1778 aa16.89■□□□□ 0.29
AP3S2-215ENST00000561410 TRIM6-TRIM34B2RNG4 842 aa16.88■□□□□ 0.29
AP3S2-215ENST00000561410 SDSP20132 328 aa16.88■□□□□ 0.29
AP3S2-215ENST00000561410 RFC4P35249 363 aa16.88■□□□□ 0.29
AP3S2-215ENST00000561410 IL15P40933 162 aaPredicted RBP16.88■□□□□ 0.29
AP3S2-215ENST00000561410 MFAP1P55081 439 aaKnown RBP16.88■□□□□ 0.29
AP3S2-215ENST00000561410 TRAPPC3LQ5T215 181 aa16.88■□□□□ 0.29
AP3S2-215ENST00000561410 TSHZ3Q63HK5 1081 aa16.88■□□□□ 0.29
AP3S2-215ENST00000561410 LY75O60449 1722 aa16.87■□□□□ 0.29
AP3S2-215ENST00000561410 BRWD3Q6RI45 1802 aa16.87■□□□□ 0.29
AP3S2-215ENST00000561410 ANKRD18BA2A2Z9 1011 aa16.87■□□□□ 0.29
AP3S2-215ENST00000561410 CIAO1O76071 339 aa16.87■□□□□ 0.29
AP3S2-215ENST00000561410 SEC24BO95487 1268 aa16.87■□□□□ 0.29
AP3S2-215ENST00000561410 CSF1RP07333 972 aa16.87■□□□□ 0.29
AP3S2-215ENST00000561410 ADRA2BP18089 450 aa16.87■□□□□ 0.29
AP3S2-215ENST00000561410 USPL1Q5W0Q7 1092 aa16.87■□□□□ 0.29
AP3S2-215ENST00000561410 TBC1D9Q6ZT07 1266 aa16.87■□□□□ 0.29
AP3S2-215ENST00000561410 ECHDC1Q9NTX5 307 aa16.87■□□□□ 0.29
AP3S2-215ENST00000561410 FBXO3Q9UK99 471 aa16.87■□□□□ 0.29
AP3S2-215ENST00000561410 USP42Q9H9J4 1324 aaKnown RBP16.87■□□□□ 0.29
AP3S2-215ENST00000561410 EYA2O00167 538 aa16.86■□□□□ 0.29
AP3S2-215ENST00000561410 GLRX3O76003 335 aaKnown RBP16.86■□□□□ 0.29
AP3S2-215ENST00000561410 PHF14O94880 888 aa16.86■□□□□ 0.29
AP3S2-215ENST00000561410 TFCP2Q12800 502 aa16.86■□□□□ 0.29
AP3S2-215ENST00000561410 SYNE4Q8N205 404 aa16.86■□□□□ 0.29
AP3S2-215ENST00000561410 CCDC85AQ96PX6 553 aaPredicted RBP16.86■□□□□ 0.29
AP3S2-215ENST00000561410 MYH14Q7Z406 1995 aaKnown RBP16.86■□□□□ 0.29
AP3S2-215ENST00000561410 NUP98P52948 1817 aa16.85■□□□□ 0.29
AP3S2-215ENST00000561410 APBA3O96018 575 aa16.85■□□□□ 0.29
AP3S2-215ENST00000561410 GTF2E1P29083 439 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms