RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 ZBTB7CA1YPR0 619 aa6.52□□□□□ -1.37
GABPB1-207ENST00000558335 LIG1P18858 919 aa6.52□□□□□ -1.37
GABPB1-207ENST00000558335 HSPA4P34932 840 aa6.52□□□□□ -1.37
GABPB1-207ENST00000558335 NLRP6P59044 892 aa6.52□□□□□ -1.37
GABPB1-207ENST00000558335 PLEKHO1Q53GL0 409 aaPredicted RBP6.52□□□□□ -1.37
GABPB1-207ENST00000558335 HSP90AB2PQ58FF8 381 aa6.52□□□□□ -1.37
GABPB1-207ENST00000558335 CCDC183Q5T5S1 534 aa6.52□□□□□ -1.37
GABPB1-207ENST00000558335 HDGFL1Q5TGJ6 251 aa6.52□□□□□ -1.37
GABPB1-207ENST00000558335 TMED8Q6PL24 325 aaPredicted RBP6.52□□□□□ -1.37
GABPB1-207ENST00000558335 ZNF771Q7L3S4 317 aaPredicted RBP6.52□□□□□ -1.37
GABPB1-207ENST00000558335 GOLGA6L1Q8N7Z2 621 aa6.52□□□□□ -1.37
GABPB1-207ENST00000558335 PANK2Q9BZ23 570 aa6.52□□□□□ -1.37
GABPB1-207ENST00000558335 NBPF3Q9H094 633 aa6.52□□□□□ -1.37
GABPB1-207ENST00000558335 PRDM16Q9HAZ2 1276 aa6.52□□□□□ -1.37
GABPB1-207ENST00000558335 DIAPH3Q9NSV4 1193 aa6.52□□□□□ -1.37
GABPB1-207ENST00000558335 DONSONQ9NYP3 566 aa6.52□□□□□ -1.37
GABPB1-207ENST00000558335 FEZ2Q9UHY8 353 aaPredicted RBP6.52□□□□□ -1.37
GABPB1-207ENST00000558335 LIMCH1Q9UPQ0 1083 aa6.52□□□□□ -1.37
GABPB1-207ENST00000558335 ZKSCAN5Q9Y2L8 839 aa6.52□□□□□ -1.37
GABPB1-207ENST00000558335 FER1L4A9Z1Z3 1794 aa6.52□□□□□ -1.37
GABPB1-207ENST00000558335 KDM3BQ7LBC6 1761 aa6.52□□□□□ -1.37
GABPB1-207ENST00000558335 CCDC171Q6TFL3 1326 aa6.51□□□□□ -1.37
GABPB1-207ENST00000558335 UQCRHLA0A096LP55 91 aa6.51□□□□□ -1.37
GABPB1-207ENST00000558335 UQCRHP07919 91 aa6.51□□□□□ -1.37
GABPB1-207ENST00000558335 GTF2F1P35269 517 aaKnown RBP eCLIP6.51□□□□□ -1.37
GABPB1-207ENST00000558335 GTF2A1P52655 376 aaPredicted RBP6.51□□□□□ -1.37
GABPB1-207ENST00000558335 UBE2HP62256 183 aa6.51□□□□□ -1.37
GABPB1-207ENST00000558335 TEFQ10587 303 aa6.51□□□□□ -1.37
GABPB1-207ENST00000558335 CHAF1AQ13111 956 aaPredicted RBP6.51□□□□□ -1.37
GABPB1-207ENST00000558335 MTX1Q13505 466 aa6.51□□□□□ -1.37
GABPB1-207ENST00000558335 MLECQ14165 292 aa6.51□□□□□ -1.37
GABPB1-207ENST00000558335 DCTN1Q14203 1278 aa6.51□□□□□ -1.37
GABPB1-207ENST00000558335 KRT32Q14532 448 aa6.51□□□□□ -1.37
GABPB1-207ENST00000558335 VPS53Q5VIR6 699 aa6.51□□□□□ -1.37
GABPB1-207ENST00000558335 RILPL2Q969X0 211 aa6.51□□□□□ -1.37
GABPB1-207ENST00000558335 EVI5LQ96CN4 794 aa6.51□□□□□ -1.37
GABPB1-207ENST00000558335 EYA1Q99502 592 aa6.51□□□□□ -1.37
GABPB1-207ENST00000558335 TACO1Q9BSH4 297 aaKnown RBP6.51□□□□□ -1.37
GABPB1-207ENST00000558335 ALDH8A1Q9H2A2 487 aaPredicted RBP6.51□□□□□ -1.37
GABPB1-207ENST00000558335 MED4Q9NPJ6 270 aa6.51□□□□□ -1.37
GABPB1-207ENST00000558335 HYPKQ9NX55 129 aa6.51□□□□□ -1.37
GABPB1-207ENST00000558335 OGFRQ9NZT2 677 aa6.51□□□□□ -1.37
GABPB1-207ENST00000558335 HMG20BQ9P0W2 317 aa6.51□□□□□ -1.37
GABPB1-207ENST00000558335 DBF4Q9UBU7 674 aaPredicted RBP6.51□□□□□ -1.37
GABPB1-207ENST00000558335 SMC3Q9UQE7 1217 aa6.51□□□□□ -1.37
GABPB1-207ENST00000558335 AMOTL2Q9Y2J4 779 aa6.51□□□□□ -1.37
GABPB1-207ENST00000558335 MRVI1Q9Y6F6 885 aa6.51□□□□□ -1.37
GABPB1-207ENST00000558335 RFX7Q2KHR2 1363 aa6.51□□□□□ -1.37
GABPB1-207ENST00000558335 LTN1O94822 1766 aa6.51□□□□□ -1.37
GABPB1-207ENST00000558335 ABCC6O95255 1503 aa6.5□□□□□ -1.37
GABPB1-207ENST00000558335 CRYBG1Q9Y4K1 1723 aa6.5□□□□□ -1.37
GABPB1-207ENST00000558335 MED1Q15648 1581 aaPredicted RBP6.5□□□□□ -1.37
GABPB1-207ENST00000558335 CEP170BQ9Y4F5 1589 aaPredicted RBP6.5□□□□□ -1.37
GABPB1-207ENST00000558335 CEMIPQ8WUJ3 1361 aa6.5□□□□□ -1.37
GABPB1-207ENST00000558335 SURF6O75683 361 aaKnown RBP6.5□□□□□ -1.37
GABPB1-207ENST00000558335 CD2BP2O95400 341 aaKnown RBP6.5□□□□□ -1.37
GABPB1-207ENST00000558335 ZSCAN22P10073 491 aaPredicted RBP6.5□□□□□ -1.37
GABPB1-207ENST00000558335 HOXC9P31274 260 aa6.5□□□□□ -1.37
GABPB1-207ENST00000558335 LRRFIP1Q32MZ4 808 aaKnown RBP6.5□□□□□ -1.37
GABPB1-207ENST00000558335 AKAP4Q5JQC9 854 aa6.5□□□□□ -1.37
GABPB1-207ENST00000558335 C1orf141Q5JVX7 400 aa6.5□□□□□ -1.37
GABPB1-207ENST00000558335 C16orf71Q8IYS4 520 aaPredicted RBP6.5□□□□□ -1.37
GABPB1-207ENST00000558335 RHPN1Q8TCX5 695 aa6.5□□□□□ -1.37
GABPB1-207ENST00000558335 DNAAF4Q8WXU2 420 aa6.5□□□□□ -1.37
GABPB1-207ENST00000558335 IP6K1Q92551 441 aa6.5□□□□□ -1.37
GABPB1-207ENST00000558335 USP25Q9UHP3 1055 aa6.5□□□□□ -1.37
GABPB1-207ENST00000558335 CYP46A1Q9Y6A2 500 aa6.5□□□□□ -1.37
GABPB1-207ENST00000558335 APBB1O00213 710 aa6.49□□□□□ -1.37
GABPB1-207ENST00000558335 SGSM2O43147 1006 aa6.49□□□□□ -1.37
GABPB1-207ENST00000558335 SRGAP3O43295 1099 aa6.49□□□□□ -1.37
GABPB1-207ENST00000558335 IFIT2P09913 472 aaKnown RBP6.49□□□□□ -1.37
GABPB1-207ENST00000558335 NEXNQ0ZGT2 675 aa6.49□□□□□ -1.37
GABPB1-207ENST00000558335 ATL3Q6DD88 541 aa6.49□□□□□ -1.37
GABPB1-207ENST00000558335 TSHZ1Q6ZSZ6 1077 aa6.49□□□□□ -1.37
GABPB1-207ENST00000558335 GAS2L3Q86XJ1 694 aa6.49□□□□□ -1.37
GABPB1-207ENST00000558335 ABTB2Q8N961 1025 aa6.49□□□□□ -1.37
GABPB1-207ENST00000558335 ITFG2Q969R8 447 aa6.49□□□□□ -1.37
GABPB1-207ENST00000558335 SCAND2PQ9GZW5 306 aaPredicted RBP6.49□□□□□ -1.37
GABPB1-207ENST00000558335 ECHDC1Q9NTX5 307 aa6.49□□□□□ -1.37
GABPB1-207ENST00000558335 ZRANB1Q9UGI0 708 aa6.49□□□□□ -1.37
GABPB1-207ENST00000558335 CLEC11AQ9Y240 323 aa6.49□□□□□ -1.37
GABPB1-207ENST00000558335 EXOC6BQ9Y2D4 811 aa6.49□□□□□ -1.37
GABPB1-207ENST00000558335 LRRFIP2Q9Y608 721 aaKnown RBP6.49□□□□□ -1.37
GABPB1-207ENST00000558335 ELP1O95163 1332 aa6.49□□□□□ -1.37
GABPB1-207ENST00000558335 KIF1AQ12756 1690 aa6.49□□□□□ -1.37
GABPB1-207ENST00000558335 GOLGA6L4A6NEF3 574 aa6.48□□□□□ -1.37
GABPB1-207ENST00000558335 PPP1R12AO14974 1030 aaPredicted RBP6.48□□□□□ -1.37
GABPB1-207ENST00000558335 STX6O43752 255 aa6.48□□□□□ -1.37
GABPB1-207ENST00000558335 SMARCA5O60264 1052 aaPredicted RBP6.48□□□□□ -1.37
GABPB1-207ENST00000558335 CCDC192P0DO97 292 aa6.48□□□□□ -1.37
GABPB1-207ENST00000558335 ARID4AP29374 1257 aaPredicted RBP6.48□□□□□ -1.37
GABPB1-207ENST00000558335 KRT85P78386 507 aa6.48□□□□□ -1.37
GABPB1-207ENST00000558335 G3BP1Q13283 466 aaKnown RBP eCLIP6.48□□□□□ -1.37
GABPB1-207ENST00000558335 SWT1Q5T5J6 900 aaKnown RBP6.48□□□□□ -1.37
GABPB1-207ENST00000558335 CCDC91Q7Z6B0 441 aa6.48□□□□□ -1.37
GABPB1-207ENST00000558335 MYRIPQ8NFW9 859 aa6.48□□□□□ -1.37
GABPB1-207ENST00000558335 KCNB2Q92953 911 aa6.48□□□□□ -1.37
GABPB1-207ENST00000558335 USP44Q9H0E7 712 aa6.48□□□□□ -1.37
GABPB1-207ENST00000558335 C9orf78Q9NZ63 289 aaPredicted RBP6.48□□□□□ -1.37
GABPB1-207ENST00000558335 RGPD8O14715 1765 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms