RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 BICC1Q9H694 974 aaKnown RBP18.03■□□□□ 0.48
ARHGEF40-208ENST00000557498 ZNF652Q9Y2D9 606 aa18.03■□□□□ 0.48
ARHGEF40-208ENST00000557498 SRGAP3O43295 1099 aa18.02■□□□□ 0.48
ARHGEF40-208ENST00000557498 JARID2Q92833 1246 aaPredicted RBP18.02■□□□□ 0.48
ARHGEF40-208ENST00000557498 UBN2Q6ZU65 1347 aa18.01■□□□□ 0.47
ARHGEF40-208ENST00000557498 PCCAP05165 728 aaPredicted RBP18.01■□□□□ 0.47
ARHGEF40-208ENST00000557498 RABL6Q3YEC7 729 aaPredicted RBP18.01■□□□□ 0.47
ARHGEF40-208ENST00000557498 PROM2Q8N271 834 aa18.01■□□□□ 0.47
ARHGEF40-208ENST00000557498 ZBTB38Q8NAP3 1195 aaPredicted RBP18.01■□□□□ 0.47
ARHGEF40-208ENST00000557498 NARFQ9UHQ1 456 aa18.01■□□□□ 0.47
ARHGEF40-208ENST00000557498 EPHA10Q5JZY3 1008 aa18■□□□□ 0.47
ARHGEF40-208ENST00000557498 CLEC4GQ6UXB4 293 aa18■□□□□ 0.47
ARHGEF40-208ENST00000557498 CHD1LQ86WJ1 897 aa18■□□□□ 0.47
ARHGEF40-208ENST00000557498 CDHR2Q9BYE9 1310 aa17.99■□□□□ 0.47
ARHGEF40-208ENST00000557498 COL24A1Q17RW2 1714 aa17.99■□□□□ 0.47
ARHGEF40-208ENST00000557498 ADRA2BP18089 450 aa17.99■□□□□ 0.47
ARHGEF40-208ENST00000557498 RGS3P49796 1198 aa17.99■□□□□ 0.47
ARHGEF40-208ENST00000557498 PARP10Q53GL7 1025 aa17.99■□□□□ 0.47
ARHGEF40-208ENST00000557498 ANKRD45Q5TZF3 282 aa17.99■□□□□ 0.47
ARHGEF40-208ENST00000557498 SMIM5Q71RC9 77 aa17.99■□□□□ 0.47
ARHGEF40-208ENST00000557498 AMIGO3Q86WK7 504 aa17.99■□□□□ 0.47
ARHGEF40-208ENST00000557498 FOXO4P98177 505 aa17.98■□□□□ 0.47
ARHGEF40-208ENST00000557498 RTL5Q5HYW3 569 aaPredicted RBP17.98■□□□□ 0.47
ARHGEF40-208ENST00000557498 TRAPPC3LQ5T215 181 aa17.98■□□□□ 0.47
ARHGEF40-208ENST00000557498 ARHGEF1Q92888 912 aaKnown RBP17.98■□□□□ 0.47
ARHGEF40-208ENST00000557498 LNPKQ9C0E8 428 aa17.98■□□□□ 0.47
ARHGEF40-208ENST00000557498 BCL2L12Q9HB09 334 aa17.98■□□□□ 0.47
ARHGEF40-208ENST00000557498 EXOC6BQ9Y2D4 811 aa17.98■□□□□ 0.47
ARHGEF40-208ENST00000557498 LAMB2P55268 1798 aa17.98■□□□□ 0.47
ARHGEF40-208ENST00000557498 USP42Q9H9J4 1324 aaKnown RBP17.98■□□□□ 0.47
ARHGEF40-208ENST00000557498 ZPR1O75312 459 aa17.97■□□□□ 0.47
ARHGEF40-208ENST00000557498 PHF14O94880 888 aa17.97■□□□□ 0.47
ARHGEF40-208ENST00000557498 PDE4AP27815 886 aa17.97■□□□□ 0.47
ARHGEF40-208ENST00000557498 SSFA2P28290 1259 aa17.97■□□□□ 0.47
ARHGEF40-208ENST00000557498 USPL1Q5W0Q7 1092 aa17.97■□□□□ 0.47
ARHGEF40-208ENST00000557498 PLA2G12BQ9BX93 195 aa17.97■□□□□ 0.47
ARHGEF40-208ENST00000557498 SRP68Q9UHB9 627 aaKnown RBP17.97■□□□□ 0.47
ARHGEF40-208ENST00000557498 NIP7Q9Y221 180 aaKnown RBP eCLIP17.97■□□□□ 0.47
ARHGEF40-208ENST00000557498 TUBGCP6Q96RT7 1819 aa17.96■□□□□ 0.47
ARHGEF40-208ENST00000557498 SURF6O75683 361 aaKnown RBP17.96■□□□□ 0.47
ARHGEF40-208ENST00000557498 SUSD4Q5VX71 490 aa17.96■□□□□ 0.47
ARHGEF40-208ENST00000557498 FAM89AQ96GI7 184 aa17.96■□□□□ 0.47
ARHGEF40-208ENST00000557498 ZBTB47Q9UFB7 747 aaPredicted RBP17.96■□□□□ 0.47
ARHGEF40-208ENST00000557498 TRMT112Q9UI30 125 aaKnown RBP17.96■□□□□ 0.47
ARHGEF40-208ENST00000557498 NOP58Q9Y2X3 529 aaKnown RBP17.96■□□□□ 0.47
ARHGEF40-208ENST00000557498 MYH3P11055 1940 aa17.96■□□□□ 0.47
ARHGEF40-208ENST00000557498 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.95■□□□□ 0.46
ARHGEF40-208ENST00000557498 RAB11FIP3O75154 756 aa17.95■□□□□ 0.46
ARHGEF40-208ENST00000557498 RFC4P35249 363 aa17.95■□□□□ 0.46
ARHGEF40-208ENST00000557498 HSP90AB4PQ58FF6 505 aa17.95■□□□□ 0.46
ARHGEF40-208ENST00000557498 LMBR1LQ6UX01 489 aa17.95■□□□□ 0.46
ARHGEF40-208ENST00000557498 UTP14AQ9BVJ6 771 aaKnown RBP17.95■□□□□ 0.46
ARHGEF40-208ENST00000557498 APBB1O00213 710 aa17.94■□□□□ 0.46
ARHGEF40-208ENST00000557498 AKT1S1Q96B36 256 aa17.94■□□□□ 0.46
ARHGEF40-208ENST00000557498 DDX60Q8IY21 1712 aaKnown RBP17.94■□□□□ 0.46
ARHGEF40-208ENST00000557498 SH3TC1Q8TE82 1336 aa17.94■□□□□ 0.46
ARHGEF40-208ENST00000557498 NTSR2O95665 410 aa17.93■□□□□ 0.46
ARHGEF40-208ENST00000557498 RFX5P48382 616 aaPredicted RBP17.93■□□□□ 0.46
ARHGEF40-208ENST00000557498 ZNF827Q17R98 1081 aa17.93■□□□□ 0.46
ARHGEF40-208ENST00000557498 TBC1D9BQ66K14 1250 aa17.93■□□□□ 0.46
ARHGEF40-208ENST00000557498 LRRCC1Q9C099 1032 aa17.93■□□□□ 0.46
ARHGEF40-208ENST00000557498 IRS4O14654 1257 aaPredicted RBP17.92■□□□□ 0.46
ARHGEF40-208ENST00000557498 SMARCA5O60264 1052 aaPredicted RBP17.92■□□□□ 0.46
ARHGEF40-208ENST00000557498 SYNE4Q8N205 404 aa17.92■□□□□ 0.46
ARHGEF40-208ENST00000557498 CAMKK2Q96RR4 588 aa17.92■□□□□ 0.46
ARHGEF40-208ENST00000557498 COPRSQ9NQ92 184 aa17.92■□□□□ 0.46
ARHGEF40-208ENST00000557498 PA2G4Q9UQ80 394 aaKnown RBP17.92■□□□□ 0.46
ARHGEF40-208ENST00000557498 CHMP3Q9Y3E7 222 aa17.92■□□□□ 0.46
ARHGEF40-208ENST00000557498 FAM177BA6PVY3 158 aa17.91■□□□□ 0.46
ARHGEF40-208ENST00000557498 PDE8AO60658 829 aa17.91■□□□□ 0.46
ARHGEF40-208ENST00000557498 CSF1RP07333 972 aa17.91■□□□□ 0.46
ARHGEF40-208ENST00000557498 SF3B2Q13435 895 aaKnown RBP17.91■□□□□ 0.46
ARHGEF40-208ENST00000557498 OS9Q13438 667 aaPredicted RBP17.91■□□□□ 0.46
ARHGEF40-208ENST00000557498 ERC1Q8IUD2 1116 aa17.91■□□□□ 0.46
ARHGEF40-208ENST00000557498 RHPN1Q8TCX5 695 aa17.91■□□□□ 0.46
ARHGEF40-208ENST00000557498 KIF1BPQ96EK5 621 aa17.91■□□□□ 0.46
ARHGEF40-208ENST00000557498 CTSWP56202 376 aa17.9■□□□□ 0.46
ARHGEF40-208ENST00000557498 EN1Q05925 392 aaPredicted RBP17.9■□□□□ 0.46
ARHGEF40-208ENST00000557498 EZH2Q15910 746 aaKnown RBP17.9■□□□□ 0.46
ARHGEF40-208ENST00000557498 BICDL1Q6ZP65 573 aa17.9■□□□□ 0.46
ARHGEF40-208ENST00000557498 SETDB2Q96T68 719 aa17.9■□□□□ 0.46
ARHGEF40-208ENST00000557498 HSP90B1P14625 803 aaKnown RBP17.89■□□□□ 0.45
ARHGEF40-208ENST00000557498 BAG6P46379 1132 aa17.89■□□□□ 0.45
ARHGEF40-208ENST00000557498 PTPN12Q05209 780 aaKnown RBP17.89■□□□□ 0.45
ARHGEF40-208ENST00000557498 G3BP1Q13283 466 aaKnown RBP eCLIP17.89■□□□□ 0.45
ARHGEF40-208ENST00000557498 KLHDC4Q8TBB5 520 aa17.89■□□□□ 0.45
ARHGEF40-208ENST00000557498 NYXQ9GZU5 481 aa17.89■□□□□ 0.45
ARHGEF40-208ENST00000557498 TFCP2L1Q9NZI6 479 aa17.89■□□□□ 0.45
ARHGEF40-208ENST00000557498 QSER1Q2KHR3 1735 aa17.89■□□□□ 0.45
ARHGEF40-208ENST00000557498 FAM161AQ3B820 660 aa17.88■□□□□ 0.45
ARHGEF40-208ENST00000557498 CASZ1Q86V15 1759 aa17.88■□□□□ 0.45
ARHGEF40-208ENST00000557498 CARMIL3Q8ND23 1372 aa17.88■□□□□ 0.45
ARHGEF40-208ENST00000557498 GYS1P13807 737 aa17.87■□□□□ 0.45
ARHGEF40-208ENST00000557498 HCLS1P14317 486 aaPredicted RBP17.87■□□□□ 0.45
ARHGEF40-208ENST00000557498 CCDC57Q2TAC2 916 aa17.87■□□□□ 0.45
ARHGEF40-208ENST00000557498 NUTM1Q86Y26 1132 aa17.87■□□□□ 0.45
ARHGEF40-208ENST00000557498 PLEKHM2Q8IWE5 1019 aa17.87■□□□□ 0.45
ARHGEF40-208ENST00000557498 C16orf71Q8IYS4 520 aaPredicted RBP17.87■□□□□ 0.45
ARHGEF40-208ENST00000557498 FLAD1Q8NFF5 587 aa17.87■□□□□ 0.45
ARHGEF40-208ENST00000557498 TTLL11Q8NHH1 800 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms