RNA–Protein interactions for RNA: ENST00000556772.5

NUMB-223, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best) BASIC

Gene NUMB, Length 5,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-223ENST00000556772 USP16Q9Y5T5 823 aa9.37□□□□□ -0.91
NUMB-223ENST00000556772 TCEAL9Q9UHQ7 104 aa9.36□□□□□ -0.91
NUMB-223ENST00000556772 A2MP01023 1474 aa9.36□□□□□ -0.91
NUMB-223ENST00000556772 ZNF213O14771 459 aa9.36□□□□□ -0.91
NUMB-223ENST00000556772 CCDC82Q8N4S0 544 aa9.36□□□□□ -0.91
NUMB-223ENST00000556772 AOPEPQ8N6M6 819 aa9.36□□□□□ -0.91
NUMB-223ENST00000556772 LRRC2Q9BYS8 371 aa9.36□□□□□ -0.91
NUMB-223ENST00000556772 NPHP3Q7Z494 1330 aa9.36□□□□□ -0.91
NUMB-223ENST00000556772 LMTK3Q96Q04 1460 aa9.36□□□□□ -0.91
NUMB-223ENST00000556772 GOLIM4O00461 696 aa9.36□□□□□ -0.91
NUMB-223ENST00000556772 ODF2Q5BJF6 829 aa9.36□□□□□ -0.91
NUMB-223ENST00000556772 GAS2L3Q86XJ1 694 aa9.36□□□□□ -0.91
NUMB-223ENST00000556772 MYRIPQ8NFW9 859 aa9.36□□□□□ -0.91
NUMB-223ENST00000556772 PIBF1Q8WXW3 757 aa9.36□□□□□ -0.91
NUMB-223ENST00000556772 KDM5BQ9UGL1 1544 aa9.36□□□□□ -0.91
NUMB-223ENST00000556772 ERLIN2O94905 339 aa9.36□□□□□ -0.91
NUMB-223ENST00000556772 C17orf53Q8N3J3 647 aaPredicted RBP9.36□□□□□ -0.91
NUMB-223ENST00000556772 MPHOSPH8Q99549 860 aa9.36□□□□□ -0.91
NUMB-223ENST00000556772 FEZ1Q99689 392 aa9.36□□□□□ -0.91
NUMB-223ENST00000556772 GNL3LQ9NVN8 582 aaKnown RBP9.36□□□□□ -0.91
NUMB-223ENST00000556772 RAI14Q9P0K7 980 aa9.36□□□□□ -0.91
NUMB-223ENST00000556772 DNMT1P26358 1616 aaKnown RBP9.36□□□□□ -0.91
NUMB-223ENST00000556772 KRT18P05783 430 aaKnown RBP9.35□□□□□ -0.91
NUMB-223ENST00000556772 UBASH3AP57075 661 aa9.35□□□□□ -0.91
NUMB-223ENST00000556772 ZNF397Q8NF99 534 aaPredicted RBP9.35□□□□□ -0.91
NUMB-223ENST00000556772 CCDC12Q8WUD4 166 aaPredicted RBP9.35□□□□□ -0.91
NUMB-223ENST00000556772 PUS7Q96PZ0 661 aaKnown RBP9.35□□□□□ -0.91
NUMB-223ENST00000556772 TRIM35Q9UPQ4 493 aa9.35□□□□□ -0.91
NUMB-223ENST00000556772 AKAP2Q9Y2D5 859 aa9.35□□□□□ -0.91
NUMB-223ENST00000556772 SHTN1A0MZ66 631 aa9.35□□□□□ -0.91
NUMB-223ENST00000556772 FSD2A1L4K1 749 aa9.35□□□□□ -0.91
NUMB-223ENST00000556772 TMEM63CQ9P1W3 806 aa9.35□□□□□ -0.91
NUMB-223ENST00000556772 SYCP2Q9BX26 1530 aa9.35□□□□□ -0.91
NUMB-223ENST00000556772 POTEB2H3BUK9 544 aa9.35□□□□□ -0.91
NUMB-223ENST00000556772 METTL24Q5JXM2 366 aa9.35□□□□□ -0.91
NUMB-223ENST00000556772 MRPS27Q92552 414 aaKnown RBP9.35□□□□□ -0.91
NUMB-223ENST00000556772 PPP1R9BQ96SB3 815 aa9.35□□□□□ -0.91
NUMB-223ENST00000556772 OGFRQ9NZT2 677 aa9.35□□□□□ -0.91
NUMB-223ENST00000556772 WDR62O43379 1518 aa9.35□□□□□ -0.91
NUMB-223ENST00000556772 MCM3P25205 808 aa9.35□□□□□ -0.91
NUMB-223ENST00000556772 AMOTQ4VCS5 1084 aa9.35□□□□□ -0.91
NUMB-223ENST00000556772 CCDC102BQ68D86 513 aa9.35□□□□□ -0.91
NUMB-223ENST00000556772 CCDC43Q96MW1 224 aaKnown RBP9.35□□□□□ -0.91
NUMB-223ENST00000556772 NUP88Q99567 741 aaPredicted RBP9.35□□□□□ -0.91
NUMB-223ENST00000556772 A0A087WZG4 1122 aa9.35□□□□□ -0.91
NUMB-223ENST00000556772 RAB11FIP4Q86YS3 637 aa9.35□□□□□ -0.91
NUMB-223ENST00000556772 KCNH5Q8NCM2 988 aa9.35□□□□□ -0.91
NUMB-223ENST00000556772 ARFGAP3Q9NP61 516 aa9.35□□□□□ -0.91
NUMB-223ENST00000556772 HAND2P61296 217 aa9.34□□□□□ -0.91
NUMB-223ENST00000556772 RIOK3O14730 519 aaKnown RBP9.34□□□□□ -0.91
NUMB-223ENST00000556772 CPA1P15085 419 aa9.34□□□□□ -0.91
NUMB-223ENST00000556772 SPA17Q15506 151 aa9.34□□□□□ -0.91
NUMB-223ENST00000556772 LRP2BPQ9P2M1 347 aa9.34□□□□□ -0.91
NUMB-223ENST00000556772 FANCAO15360 1455 aa9.34□□□□□ -0.91
NUMB-223ENST00000556772 CCDC196A0A1B0GTZ2 297 aa9.34□□□□□ -0.91
NUMB-223ENST00000556772 SYKP43405 635 aa9.34□□□□□ -0.91
NUMB-223ENST00000556772 Q6ZUG5 572 aa9.34□□□□□ -0.91
NUMB-223ENST00000556772 CADPS2Q86UW7 1296 aa9.34□□□□□ -0.91
NUMB-223ENST00000556772 SMARCC1Q92922 1105 aaPredicted RBP9.34□□□□□ -0.91
NUMB-223ENST00000556772 NAPBQ9H115 298 aa9.34□□□□□ -0.91
NUMB-223ENST00000556772 ZRANB1Q9UGI0 708 aa9.34□□□□□ -0.91
NUMB-223ENST00000556772 SLC12A7Q9Y666 1083 aa9.34□□□□□ -0.91
NUMB-223ENST00000556772 SHANK2Q9UPX8 1470 aa9.34□□□□□ -0.91
NUMB-223ENST00000556772 GOLGA8AA7E2F4 631 aa9.34□□□□□ -0.92
NUMB-223ENST00000556772 EIF4A2Q14240 407 aaKnown RBP9.34□□□□□ -0.92
NUMB-223ENST00000556772 DDX46Q7L014 1031 aaKnown RBP9.34□□□□□ -0.92
NUMB-223ENST00000556772 ZHX3Q9H4I2 956 aa9.34□□□□□ -0.92
NUMB-223ENST00000556772 CHPF2Q9P2E5 772 aa9.34□□□□□ -0.92
NUMB-223ENST00000556772 GADD45BO75293 160 aaPredicted RBP9.33□□□□□ -0.92
NUMB-223ENST00000556772 ZC3H6P61129 1189 aaKnown RBP9.33□□□□□ -0.92
NUMB-223ENST00000556772 ZFYVE27Q5T4F4 411 aa9.33□□□□□ -0.92
NUMB-223ENST00000556772 KCNG4Q8TDN1 519 aa9.33□□□□□ -0.92
NUMB-223ENST00000556772 SSRP1Q08945 709 aaKnown RBP9.33□□□□□ -0.92
NUMB-223ENST00000556772 NMIQ13287 307 aaPredicted RBP9.33□□□□□ -0.92
NUMB-223ENST00000556772 ANTXR1Q9H6X2 564 aa9.33□□□□□ -0.92
NUMB-223ENST00000556772 A0A1W2PP64 1363 aa9.33□□□□□ -0.92
NUMB-223ENST00000556772 ZMYM3Q14202 1370 aa9.33□□□□□ -0.92
NUMB-223ENST00000556772 ACEP12821 1306 aa9.33□□□□□ -0.92
NUMB-223ENST00000556772 MSH6P52701 1360 aa9.33□□□□□ -0.92
NUMB-223ENST00000556772 YEATS4O95619 227 aa9.33□□□□□ -0.92
NUMB-223ENST00000556772 IARSP41252 1262 aaKnown RBP9.33□□□□□ -0.92
NUMB-223ENST00000556772 HSP90AA4PQ58FG1 418 aa9.33□□□□□ -0.92
NUMB-223ENST00000556772 CREB3L3Q68CJ9 461 aa9.33□□□□□ -0.92
NUMB-223ENST00000556772 IFIT3O14879 490 aaKnown RBP9.33□□□□□ -0.92
NUMB-223ENST00000556772 U2AF2P26368 475 aaKnown RBP eCLIP9.33□□□□□ -0.925e-7■□□□□ 9.9
NUMB-223ENST00000556772 LMOD1P29536 600 aaPredicted RBP9.33□□□□□ -0.92
NUMB-223ENST00000556772 RUFY3Q7L099 469 aa9.33□□□□□ -0.92
NUMB-223ENST00000556772 TRMT2AQ8IZ69 625 aaKnown RBP9.33□□□□□ -0.92
NUMB-223ENST00000556772 ZFP91Q96JP5 570 aaPredicted RBP9.33□□□□□ -0.92
NUMB-223ENST00000556772 ZNF500O60304 480 aaPredicted RBP9.32□□□□□ -0.92
NUMB-223ENST00000556772 SOGA3Q5TF21 947 aa9.32□□□□□ -0.92
NUMB-223ENST00000556772 TOM1L2Q6ZVM7 507 aa9.32□□□□□ -0.92
NUMB-223ENST00000556772 UBE3BQ7Z3V4 1068 aa9.32□□□□□ -0.92
NUMB-223ENST00000556772 CCDC144CPQ8IYA2 1237 aa9.32□□□□□ -0.92
NUMB-223ENST00000556772 TAF4BQ92750 862 aa9.32□□□□□ -0.92
NUMB-223ENST00000556772 SNRKQ9NRH2 765 aa9.32□□□□□ -0.92
NUMB-223ENST00000556772 SOS1Q07889 1333 aaPredicted RBP9.32□□□□□ -0.92
NUMB-223ENST00000556772 TTC41PQ6P2S7 1318 aa9.32□□□□□ -0.92
NUMB-223ENST00000556772 CALRP27797 417 aaKnown RBP9.32□□□□□ -0.92
NUMB-223ENST00000556772 MICU3Q86XE3 530 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms