RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 BCL9LQ86UU0 1499 aa28.72■■■□□ 2.19
STRN3-207ENST00000555358 MX1P20591 662 aa28.72■■■□□ 2.19
STRN3-207ENST00000555358 PRIM1P49642 420 aaKnown RBP28.72■■■□□ 2.19
STRN3-207ENST00000555358 SSH3Q8TE77 659 aa28.72■■■□□ 2.19
STRN3-207ENST00000555358 RBSNQ9H1K0 784 aa28.72■■■□□ 2.19
STRN3-207ENST00000555358 ZSCAN30Q86W11 494 aa28.71■■■□□ 2.19
STRN3-207ENST00000555358 MARCH10Q8NA82 808 aaPredicted RBP28.71■■■□□ 2.19
STRN3-207ENST00000555358 NEURL1BA8MQ27 555 aa28.71■■■□□ 2.19
STRN3-207ENST00000555358 BARGINQ6ZT62 677 aa28.71■■■□□ 2.19
STRN3-207ENST00000555358 GRM8O00222 908 aa28.7■■■□□ 2.19
STRN3-207ENST00000555358 NEXNQ0ZGT2 675 aa28.7■■■□□ 2.19
STRN3-207ENST00000555358 DNAJC10Q8IXB1 793 aa28.7■■■□□ 2.19
STRN3-207ENST00000555358 CHAMP1Q96JM3 812 aa28.7■■■□□ 2.19
STRN3-207ENST00000555358 TTLL7Q6ZT98 887 aa28.7■■■□□ 2.18
STRN3-207ENST00000555358 RBM27Q9P2N5 1060 aaKnown RBP28.7■■■□□ 2.18
STRN3-207ENST00000555358 PALD1Q9ULE6 856 aa28.7■■■□□ 2.18
STRN3-207ENST00000555358 SRGAP3O43295 1099 aa28.69■■■□□ 2.18
STRN3-207ENST00000555358 MCM2P49736 904 aa28.69■■■□□ 2.18
STRN3-207ENST00000555358 CUL4AQ13619 759 aa28.69■■■□□ 2.18
STRN3-207ENST00000555358 POLA2Q14181 598 aa28.69■■■□□ 2.18
STRN3-207ENST00000555358 AFDNP55196 1824 aaKnown RBP28.69■■■□□ 2.18
STRN3-207ENST00000555358 CHMLP26374 656 aa28.69■■■□□ 2.18
STRN3-207ENST00000555358 STAP2Q9UGK3 403 aa28.69■■■□□ 2.18
STRN3-207ENST00000555358 SLC4A9Q96Q91 983 aa28.68■■■□□ 2.18
STRN3-207ENST00000555358 FAM98CQ17RN3 349 aaKnown RBP28.67■■■□□ 2.18
STRN3-207ENST00000555358 PLBD2Q8NHP8 589 aa28.67■■■□□ 2.18
STRN3-207ENST00000555358 IL17RAQ96F46 866 aa28.67■■■□□ 2.18
STRN3-207ENST00000555358 ACSBG1Q96GR2 724 aa28.67■■■□□ 2.18
STRN3-207ENST00000555358 UTYO14607 1347 aa28.67■■■□□ 2.18
STRN3-207ENST00000555358 ANAPC15P60006 121 aa28.67■■■□□ 2.18
STRN3-207ENST00000555358 SUCLG2Q96I99 432 aa28.67■■■□□ 2.18
STRN3-207ENST00000555358 ATP5J2-PTCD1G3V325 749 aa28.66■■■□□ 2.18
STRN3-207ENST00000555358 GCKRQ14397 625 aa28.66■■■□□ 2.18
STRN3-207ENST00000555358 VSIG10Q8N0Z9 540 aa28.66■■■□□ 2.18
STRN3-207ENST00000555358 KAZALD1Q96I82 304 aa28.66■■■□□ 2.18
STRN3-207ENST00000555358 PDLIM2Q96JY6 352 aa28.66■■■□□ 2.18
STRN3-207ENST00000555358 TMEM63CQ9P1W3 806 aa28.66■■■□□ 2.18
STRN3-207ENST00000555358 A0A0G2JS52 829 aa28.66■■■□□ 2.18
STRN3-207ENST00000555358 BRD1O95696 1058 aa28.66■■■□□ 2.18
STRN3-207ENST00000555358 HSPA1LP34931 641 aa28.65■■■□□ 2.18
STRN3-207ENST00000555358 VPS72Q15906 364 aa28.65■■■□□ 2.18
STRN3-207ENST00000555358 FNBP4Q8N3X1 1017 aaPredicted RBP28.65■■■□□ 2.18
STRN3-207ENST00000555358 NSFL1CQ9UNZ2 370 aaKnown RBP28.65■■■□□ 2.18
STRN3-207ENST00000555358 SPATA31A6Q5VVP1 1343 aa28.65■■■□□ 2.18
STRN3-207ENST00000555358 NUP188Q5SRE5 1749 aa28.65■■■□□ 2.18
STRN3-207ENST00000555358 MCCP23508 829 aa28.65■■■□□ 2.18
STRN3-207ENST00000555358 JARID2Q92833 1246 aaPredicted RBP28.64■■■□□ 2.18
STRN3-207ENST00000555358 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.64■■■□□ 2.17
STRN3-207ENST00000555358 HS1BP3Q53T59 392 aa28.63■■■□□ 2.17
STRN3-207ENST00000555358 SURF6O75683 361 aaKnown RBP28.63■■■□□ 2.17
STRN3-207ENST00000555358 RILPL2Q969X0 211 aa28.63■■■□□ 2.17
STRN3-207ENST00000555358 MTX1Q13505 466 aa28.62■■■□□ 2.17
STRN3-207ENST00000555358 LRSAM1Q6UWE0 723 aa28.62■■■□□ 2.17
STRN3-207ENST00000555358 INTS4Q96HW7 963 aaKnown RBP28.62■■■□□ 2.17
STRN3-207ENST00000555358 ANO2Q9NQ90 1003 aa28.62■■■□□ 2.17
STRN3-207ENST00000555358 ZNF330Q9Y3S2 320 aaPredicted RBP28.62■■■□□ 2.17
STRN3-207ENST00000555358 TRIM6-TRIM34B2RNG4 842 aa28.62■■■□□ 2.17
STRN3-207ENST00000555358 FOXD4L5Q5VV16 416 aaPredicted RBP28.62■■■□□ 2.17
STRN3-207ENST00000555358 FOXD4L4Q8WXT5 416 aaPredicted RBP28.62■■■□□ 2.17
STRN3-207ENST00000555358 TEX13AQ9BXU3 409 aaPredicted RBP28.62■■■□□ 2.17
STRN3-207ENST00000555358 ZBTB3Q9H5J0 574 aa28.62■■■□□ 2.17
STRN3-207ENST00000555358 BICC1Q9H694 974 aaKnown RBP28.62■■■□□ 2.17
STRN3-207ENST00000555358 AOX1Q06278 1338 aa28.61■■■□□ 2.17
STRN3-207ENST00000555358 USP21Q9UK80 565 aa28.61■■■□□ 2.17
STRN3-207ENST00000555358 STARD3NLO95772 234 aa28.59■■■□□ 2.17
STRN3-207ENST00000555358 MBD3O95983 291 aa28.59■■■□□ 2.17
STRN3-207ENST00000555358 SYCE3A1L190 88 aa28.58■■■□□ 2.17
STRN3-207ENST00000555358 MSNP26038 577 aaKnown RBP28.58■■■□□ 2.17
STRN3-207ENST00000555358 EPHA10Q5JZY3 1008 aa28.58■■■□□ 2.17
STRN3-207ENST00000555358 IL1RAPL2Q9NP60 686 aa28.58■■■□□ 2.17
STRN3-207ENST00000555358 HDAC5Q9UQL6 1122 aa28.58■■■□□ 2.17
STRN3-207ENST00000555358 IL25Q9H293 177 aa28.58■■■□□ 2.17
STRN3-207ENST00000555358 TJP1Q07157 1748 aa28.57■■■□□ 2.16
STRN3-207ENST00000555358 CYP19A1P11511 503 aaPredicted RBP28.57■■■□□ 2.16
STRN3-207ENST00000555358 PA2G4Q9UQ80 394 aaKnown RBP28.57■■■□□ 2.16
STRN3-207ENST00000555358 OFD1O75665 1012 aa28.57■■■□□ 2.16
STRN3-207ENST00000555358 TPM2P07951 284 aa28.57■■■□□ 2.16
STRN3-207ENST00000555358 UBE3BQ7Z3V4 1068 aa28.57■■■□□ 2.16
STRN3-207ENST00000555358 NOL7Q9UMY1 257 aaKnown RBP28.56■■■□□ 2.16
STRN3-207ENST00000555358 A0A087WZG4 1122 aa28.55■■■□□ 2.16
STRN3-207ENST00000555358 EPB41L2O43491 1005 aaKnown RBP28.55■■■□□ 2.16
STRN3-207ENST00000555358 KCNQ2O43526 872 aa28.55■■■□□ 2.16
STRN3-207ENST00000555358 RRP9O43818 475 aaKnown RBP28.55■■■□□ 2.16
STRN3-207ENST00000555358 RAB11FIP3O75154 756 aa28.55■■■□□ 2.16
STRN3-207ENST00000555358 NOL8Q76FK4 1167 aaKnown RBP28.55■■■□□ 2.16
STRN3-207ENST00000555358 RHPN1Q8TCX5 695 aa28.55■■■□□ 2.16
STRN3-207ENST00000555358 EIF2AK3Q9NZJ5 1116 aaKnown RBP28.55■■■□□ 2.16
STRN3-207ENST00000555358 UPF3BQ9BZI7 483 aaKnown RBP28.54■■■□□ 2.16
STRN3-207ENST00000555358 MEX3CQ5U5Q3 659 aaKnown RBP28.53■■■□□ 2.16
STRN3-207ENST00000555358 KIAA1211Q6ZU35 1233 aa28.53■■■□□ 2.16
STRN3-207ENST00000555358 ZBTB1Q9Y2K1 713 aa28.53■■■□□ 2.16
STRN3-207ENST00000555358 HSPA4P34932 840 aa28.53■■■□□ 2.16
STRN3-207ENST00000555358 CASP7P55210 303 aa28.52■■■□□ 2.16
STRN3-207ENST00000555358 HSP90AA2PQ14568 343 aaPredicted RBP28.51■■■□□ 2.16
STRN3-207ENST00000555358 KIF1BPQ96EK5 621 aa28.51■■■□□ 2.15
STRN3-207ENST00000555358 OS9Q13438 667 aaPredicted RBP28.5■■■□□ 2.15
STRN3-207ENST00000555358 NUTM1Q86Y26 1132 aa28.5■■■□□ 2.15
STRN3-207ENST00000555358 ZNF500O60304 480 aaPredicted RBP28.5■■■□□ 2.15
STRN3-207ENST00000555358 PI4K2BQ8TCG2 481 aa28.5■■■□□ 2.15
STRN3-207ENST00000555358 CWC25Q9NXE8 425 aaPredicted RBP28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms